Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06000 and CA264_06005 are separated by 112 nucleotides CA264_06005 and CA264_06010 overlap by 4 nucleotides CA264_06010 and CA264_06015 are separated by 174 nucleotides
CA264_06000: CA264_06000 - peptidase, at 1,401,447 to 1,403,318
_06000
CA264_06005: CA264_06005 - RES superfamily protein, at 1,403,431 to 1,403,895
_06005
CA264_06010: CA264_06010 - hypothetical protein, at 1,403,892 to 1,404,320
_06010
CA264_06015: CA264_06015 - hypothetical protein, at 1,404,495 to 1,405,223
_06015
Position (kb)
1403
1404 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1402.442 kb on - strand, within CA264_06000 at 1402.480 kb on - strand, within CA264_06000 at 1402.481 kb on + strand, within CA264_06000 at 1402.548 kb on + strand, within CA264_06000 at 1402.642 kb on - strand, within CA264_06000 at 1402.642 kb on - strand, within CA264_06000 at 1402.665 kb on + strand, within CA264_06000 at 1402.747 kb on - strand, within CA264_06000 at 1402.753 kb on + strand, within CA264_06000 at 1402.754 kb on - strand, within CA264_06000 at 1402.808 kb on + strand, within CA264_06000 at 1402.875 kb on + strand, within CA264_06000 at 1402.875 kb on + strand, within CA264_06000 at 1402.876 kb on - strand, within CA264_06000 at 1402.886 kb on + strand, within CA264_06000 at 1402.887 kb on - strand, within CA264_06000 at 1402.926 kb on + strand, within CA264_06000 at 1402.926 kb on + strand, within CA264_06000 at 1402.926 kb on + strand, within CA264_06000 at 1402.926 kb on + strand, within CA264_06000 at 1402.927 kb on - strand, within CA264_06000 at 1402.927 kb on - strand, within CA264_06000 at 1402.927 kb on - strand, within CA264_06000 at 1402.930 kb on + strand, within CA264_06000 at 1402.963 kb on - strand, within CA264_06000 at 1403.096 kb on + strand, within CA264_06000 at 1403.148 kb on + strand at 1403.149 kb on - strand at 1403.149 kb on - strand at 1403.165 kb on - strand at 1403.223 kb on - strand at 1403.223 kb on - strand at 1403.261 kb on - strand at 1403.261 kb on - strand at 1403.302 kb on + strand at 1403.302 kb on + strand at 1403.303 kb on - strand at 1403.303 kb on - strand at 1403.303 kb on - strand at 1403.304 kb on + strand at 1403.305 kb on - strand at 1403.305 kb on - strand at 1403.316 kb on + strand at 1403.322 kb on + strand at 1403.323 kb on - strand at 1403.323 kb on - strand at 1403.381 kb on - strand at 1403.416 kb on - strand at 1403.529 kb on + strand, within CA264_06005 at 1403.529 kb on + strand, within CA264_06005 at 1403.529 kb on + strand, within CA264_06005 at 1403.529 kb on + strand, within CA264_06005 at 1403.529 kb on + strand, within CA264_06005 at 1403.530 kb on - strand, within CA264_06005 at 1403.530 kb on - strand, within CA264_06005 at 1403.531 kb on + strand, within CA264_06005 at 1403.532 kb on - strand, within CA264_06005 at 1403.532 kb on - strand, within CA264_06005 at 1403.564 kb on - strand, within CA264_06005 at 1403.580 kb on - strand, within CA264_06005 at 1403.677 kb on - strand, within CA264_06005 at 1403.677 kb on - strand, within CA264_06005 at 1403.677 kb on - strand, within CA264_06005 at 1403.715 kb on - strand, within CA264_06005 at 1403.852 kb on - strand at 1403.864 kb on + strand at 1403.886 kb on - strand at 1403.887 kb on + strand at 1403.887 kb on + strand at 1403.887 kb on + strand at 1403.888 kb on - strand at 1403.888 kb on - strand at 1404.418 kb on + strand at 1404.418 kb on + strand at 1404.419 kb on - strand at 1404.419 kb on - strand at 1404.419 kb on - strand at 1404.419 kb on - strand at 1404.419 kb on - strand at 1404.419 kb on - strand at 1404.431 kb on + strand at 1404.431 kb on + strand at 1404.431 kb on + strand at 1404.431 kb on + strand at 1404.484 kb on - strand at 1404.491 kb on + strand at 1404.492 kb on - strand at 1404.492 kb on - strand at 1404.504 kb on + strand at 1404.504 kb on + strand at 1404.504 kb on + strand at 1404.504 kb on + strand at 1404.504 kb on + strand at 1404.505 kb on - strand at 1404.505 kb on - strand at 1404.506 kb on + strand at 1404.506 kb on + strand at 1404.506 kb on + strand at 1404.506 kb on + strand at 1404.509 kb on - strand at 1404.509 kb on - strand at 1404.600 kb on - strand, within CA264_06015 at 1404.692 kb on + strand, within CA264_06015 at 1404.692 kb on + strand, within CA264_06015 at 1404.701 kb on + strand, within CA264_06015 at 1404.720 kb on + strand, within CA264_06015 at 1404.822 kb on + strand, within CA264_06015 at 1404.832 kb on - strand, within CA264_06015 at 1404.862 kb on - strand, within CA264_06015
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 1,402,442 - CA264_06000 0.53 -0.3 1,402,480 - CA264_06000 0.55 -1.9 1,402,481 + CA264_06000 0.55 -0.3 1,402,548 + CA264_06000 0.59 +0.1 1,402,642 - CA264_06000 0.64 -0.4 1,402,642 - CA264_06000 0.64 -0.5 1,402,665 + CA264_06000 0.65 +0.3 1,402,747 - CA264_06000 0.69 -0.1 1,402,753 + CA264_06000 0.70 -0.2 1,402,754 - CA264_06000 0.70 +0.8 1,402,808 + CA264_06000 0.73 -1.5 1,402,875 + CA264_06000 0.76 -0.4 1,402,875 + CA264_06000 0.76 -0.1 1,402,876 - CA264_06000 0.76 +0.3 1,402,886 + CA264_06000 0.77 +0.3 1,402,887 - CA264_06000 0.77 -0.8 1,402,926 + CA264_06000 0.79 -1.1 1,402,926 + CA264_06000 0.79 -0.5 1,402,926 + CA264_06000 0.79 +1.8 1,402,926 + CA264_06000 0.79 +0.6 1,402,927 - CA264_06000 0.79 +1.1 1,402,927 - CA264_06000 0.79 +0.9 1,402,927 - CA264_06000 0.79 +0.6 1,402,930 + CA264_06000 0.79 -1.3 1,402,963 - CA264_06000 0.81 -0.6 1,403,096 + CA264_06000 0.88 +0.4 1,403,148 + +0.3 1,403,149 - +1.8 1,403,149 - -0.5 1,403,165 - -0.1 1,403,223 - -2.8 1,403,223 - +1.0 1,403,261 - +0.3 1,403,261 - +0.3 1,403,302 + +0.3 1,403,302 + -0.8 1,403,303 - +0.8 1,403,303 - -0.5 1,403,303 - +0.7 1,403,304 + -1.2 1,403,305 - +0.4 1,403,305 - +0.8 1,403,316 + -0.7 1,403,322 + +0.5 1,403,323 - -0.2 1,403,323 - -0.1 1,403,381 - -0.4 1,403,416 - +0.7 1,403,529 + CA264_06005 0.21 +0.1 1,403,529 + CA264_06005 0.21 -0.2 1,403,529 + CA264_06005 0.21 +0.0 1,403,529 + CA264_06005 0.21 +0.0 1,403,529 + CA264_06005 0.21 -0.6 1,403,530 - CA264_06005 0.21 -0.9 1,403,530 - CA264_06005 0.21 +0.8 1,403,531 + CA264_06005 0.22 +0.5 1,403,532 - CA264_06005 0.22 -0.4 1,403,532 - CA264_06005 0.22 -0.1 1,403,564 - CA264_06005 0.29 -0.1 1,403,580 - CA264_06005 0.32 +0.3 1,403,677 - CA264_06005 0.53 -1.2 1,403,677 - CA264_06005 0.53 +1.7 1,403,677 - CA264_06005 0.53 -0.1 1,403,715 - CA264_06005 0.61 -0.2 1,403,852 - +0.3 1,403,864 + -1.1 1,403,886 - -0.4 1,403,887 + -0.4 1,403,887 + -0.5 1,403,887 + +0.8 1,403,888 - +0.4 1,403,888 - -0.3 1,404,418 + -0.5 1,404,418 + -0.9 1,404,419 - -0.4 1,404,419 - -0.1 1,404,419 - +0.1 1,404,419 - -0.9 1,404,419 - -0.1 1,404,419 - +0.1 1,404,431 + +0.2 1,404,431 + -1.2 1,404,431 + +0.0 1,404,431 + +0.1 1,404,484 - -1.5 1,404,491 + +0.5 1,404,492 - +0.1 1,404,492 - +0.8 1,404,504 + -0.7 1,404,504 + +0.3 1,404,504 + +0.0 1,404,504 + +0.4 1,404,504 + -0.8 1,404,505 - +0.1 1,404,505 - -0.3 1,404,506 + -1.3 1,404,506 + +0.8 1,404,506 + -0.4 1,404,506 + +0.5 1,404,509 - +0.1 1,404,509 - -0.1 1,404,600 - CA264_06015 0.14 -1.1 1,404,692 + CA264_06015 0.27 -0.7 1,404,692 + CA264_06015 0.27 -0.5 1,404,701 + CA264_06015 0.28 +0.3 1,404,720 + CA264_06015 0.31 -0.2 1,404,822 + CA264_06015 0.45 -0.5 1,404,832 - CA264_06015 0.46 +0.2 1,404,862 - CA264_06015 0.50 -0.1
Or see this region's nucleotide sequence