Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_03160

Experiment: m.b. Cobalt chloride 0.05 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_03155 and CA264_03160 are separated by 3 nucleotidesCA264_03160 and CA264_03165 are separated by 228 nucleotides CA264_03155: CA264_03155 - hypothetical protein, at 737,482 to 738,237 _03155 CA264_03160: CA264_03160 - metallophosphoesterase, at 738,241 to 738,984 _03160 CA264_03165: CA264_03165 - acyl-CoA desaturase, at 739,213 to 740,283 _03165 Position (kb) 738 739Strain fitness (log2 ratio) -1 0 1 2at 737.487 kb on + strandat 737.492 kb on + strandat 737.501 kb on + strandat 737.584 kb on - strand, within CA264_03155at 737.623 kb on - strand, within CA264_03155at 737.781 kb on + strand, within CA264_03155at 737.902 kb on + strand, within CA264_03155at 737.903 kb on - strand, within CA264_03155at 737.951 kb on + strand, within CA264_03155at 737.952 kb on - strand, within CA264_03155at 737.968 kb on - strand, within CA264_03155at 738.210 kb on + strandat 738.215 kb on + strandat 738.215 kb on + strandat 738.233 kb on + strandat 738.234 kb on - strandat 738.240 kb on + strandat 738.240 kb on + strandat 738.241 kb on - strandat 738.241 kb on - strandat 738.282 kb on - strandat 738.289 kb on - strandat 738.289 kb on - strandat 738.290 kb on + strandat 738.290 kb on + strandat 738.290 kb on + strandat 738.290 kb on + strandat 738.290 kb on + strandat 738.290 kb on + strandat 738.290 kb on + strandat 738.291 kb on - strandat 738.291 kb on - strandat 738.291 kb on - strandat 738.291 kb on - strandat 738.291 kb on - strandat 738.291 kb on - strandat 738.291 kb on - strandat 738.328 kb on + strand, within CA264_03160at 738.396 kb on + strand, within CA264_03160at 738.475 kb on + strand, within CA264_03160at 738.666 kb on - strand, within CA264_03160at 738.748 kb on + strand, within CA264_03160at 738.967 kb on + strandat 738.968 kb on - strandat 738.970 kb on - strandat 739.000 kb on + strandat 739.001 kb on - strandat 739.023 kb on + strandat 739.043 kb on + strandat 739.069 kb on - strandat 739.069 kb on - strandat 739.072 kb on + strandat 739.120 kb on + strandat 739.123 kb on - strandat 739.133 kb on + strandat 739.140 kb on + strandat 739.140 kb on + strandat 739.140 kb on + strandat 739.169 kb on + strandat 739.169 kb on + strandat 739.191 kb on + strandat 739.213 kb on - strandat 739.283 kb on - strandat 739.319 kb on - strandat 739.320 kb on + strand, within CA264_03165at 739.320 kb on + strand, within CA264_03165at 739.321 kb on - strand, within CA264_03165at 739.343 kb on + strand, within CA264_03165at 739.348 kb on - strand, within CA264_03165at 739.368 kb on - strand, within CA264_03165at 739.374 kb on - strand, within CA264_03165at 739.569 kb on + strand, within CA264_03165at 739.584 kb on - strand, within CA264_03165at 739.597 kb on + strand, within CA264_03165at 739.598 kb on - strand, within CA264_03165at 739.607 kb on + strand, within CA264_03165at 739.607 kb on + strand, within CA264_03165at 739.607 kb on + strand, within CA264_03165at 739.608 kb on - strand, within CA264_03165at 739.763 kb on - strand, within CA264_03165at 739.783 kb on - strand, within CA264_03165at 739.822 kb on - strand, within CA264_03165at 739.836 kb on + strand, within CA264_03165at 739.876 kb on + strand, within CA264_03165at 739.877 kb on - strand, within CA264_03165at 739.929 kb on - strand, within CA264_03165at 739.948 kb on - strand, within CA264_03165

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM
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737,487 + -0.3
737,492 + +0.3
737,501 + +0.1
737,584 - CA264_03155 0.13 +0.3
737,623 - CA264_03155 0.19 -0.7
737,781 + CA264_03155 0.40 -0.9
737,902 + CA264_03155 0.56 +0.1
737,903 - CA264_03155 0.56 +0.2
737,951 + CA264_03155 0.62 -0.4
737,952 - CA264_03155 0.62 +0.2
737,968 - CA264_03155 0.64 +0.9
738,210 + +0.2
738,215 + +0.3
738,215 + -0.1
738,233 + -0.3
738,234 - -0.1
738,240 + -0.1
738,240 + -0.3
738,241 - -0.6
738,241 - +0.1
738,282 - -0.2
738,289 - -0.0
738,289 - +0.2
738,290 + -1.2
738,290 + +0.0
738,290 + +0.2
738,290 + -0.2
738,290 + -0.0
738,290 + -0.1
738,290 + +0.0
738,291 - -0.3
738,291 - -0.2
738,291 - -0.0
738,291 - +0.3
738,291 - -0.3
738,291 - -0.1
738,291 - +0.2
738,328 + CA264_03160 0.12 +0.3
738,396 + CA264_03160 0.21 -0.1
738,475 + CA264_03160 0.31 -1.3
738,666 - CA264_03160 0.57 -0.3
738,748 + CA264_03160 0.68 -0.2
738,967 + -0.3
738,968 - +0.1
738,970 - +1.0
739,000 + -0.6
739,001 - +2.3
739,023 + -0.5
739,043 + -0.1
739,069 - +0.2
739,069 - -0.1
739,072 + +0.5
739,120 + +0.1
739,123 - -0.4
739,133 + -0.1
739,140 + +0.3
739,140 + +0.0
739,140 + -0.1
739,169 + +0.9
739,169 + -0.2
739,191 + +0.2
739,213 - -0.0
739,283 - -0.5
739,319 - +0.7
739,320 + CA264_03165 0.10 +0.7
739,320 + CA264_03165 0.10 -1.2
739,321 - CA264_03165 0.10 -1.2
739,343 + CA264_03165 0.12 -1.0
739,348 - CA264_03165 0.13 -0.2
739,368 - CA264_03165 0.14 -0.2
739,374 - CA264_03165 0.15 +0.3
739,569 + CA264_03165 0.33 -1.0
739,584 - CA264_03165 0.35 -0.3
739,597 + CA264_03165 0.36 +0.6
739,598 - CA264_03165 0.36 -0.7
739,607 + CA264_03165 0.37 +0.0
739,607 + CA264_03165 0.37 +0.7
739,607 + CA264_03165 0.37 -0.3
739,608 - CA264_03165 0.37 -0.3
739,763 - CA264_03165 0.51 -0.8
739,783 - CA264_03165 0.53 -0.0
739,822 - CA264_03165 0.57 -0.1
739,836 + CA264_03165 0.58 -0.9
739,876 + CA264_03165 0.62 -1.4
739,877 - CA264_03165 0.62 -0.7
739,929 - CA264_03165 0.67 +0.0
739,948 - CA264_03165 0.69 +0.1

Or see this region's nucleotide sequence