Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS15245 and ABID97_RS15250 are separated by 48 nucleotides ABID97_RS15250 and ABID97_RS15255 are separated by 159 nucleotides
ABID97_RS15245: ABID97_RS15245 - phage major capsid protein, P2 family, at 3,153,521 to 3,154,528
_RS15245
ABID97_RS15250: ABID97_RS15250 - GPO family capsid scaffolding protein, at 3,154,577 to 3,155,419
_RS15250
ABID97_RS15255: ABID97_RS15255 - terminase ATPase subunit family protein, at 3,155,579 to 3,157,357
_RS15255
Position (kb)
3154
3155
3156 Strain fitness (log2 ratio)
-2
-1
0
1 at 3153.600 kb on + strand at 3153.601 kb on - strand at 3153.717 kb on + strand, within ABID97_RS15245 at 3153.718 kb on - strand, within ABID97_RS15245 at 3153.904 kb on - strand, within ABID97_RS15245 at 3153.904 kb on - strand, within ABID97_RS15245 at 3153.937 kb on - strand, within ABID97_RS15245 at 3154.216 kb on - strand, within ABID97_RS15245 at 3154.216 kb on - strand, within ABID97_RS15245 at 3154.216 kb on - strand, within ABID97_RS15245 at 3155.073 kb on + strand, within ABID97_RS15250 at 3155.121 kb on + strand, within ABID97_RS15250 at 3155.122 kb on - strand, within ABID97_RS15250 at 3155.122 kb on - strand, within ABID97_RS15250 at 3155.506 kb on - strand at 3155.605 kb on + strand at 3155.606 kb on - strand at 3155.606 kb on - strand at 3155.891 kb on + strand, within ABID97_RS15255 at 3155.891 kb on + strand, within ABID97_RS15255 at 3156.114 kb on - strand, within ABID97_RS15255 at 3156.209 kb on + strand, within ABID97_RS15255 at 3156.290 kb on + strand, within ABID97_RS15255 at 3156.341 kb on + strand, within ABID97_RS15255 at 3156.342 kb on - strand, within ABID97_RS15255 at 3156.342 kb on - strand, within ABID97_RS15255
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 3,153,600 + -0.4 3,153,601 - +0.3 3,153,717 + ABID97_RS15245 0.19 +1.0 3,153,718 - ABID97_RS15245 0.20 -1.6 3,153,904 - ABID97_RS15245 0.38 -1.1 3,153,904 - ABID97_RS15245 0.38 -0.2 3,153,937 - ABID97_RS15245 0.41 +0.2 3,154,216 - ABID97_RS15245 0.69 -0.5 3,154,216 - ABID97_RS15245 0.69 -0.1 3,154,216 - ABID97_RS15245 0.69 -0.5 3,155,073 + ABID97_RS15250 0.59 +0.9 3,155,121 + ABID97_RS15250 0.65 -0.7 3,155,122 - ABID97_RS15250 0.65 -1.9 3,155,122 - ABID97_RS15250 0.65 -0.8 3,155,506 - -1.4 3,155,605 + +0.0 3,155,606 - -0.3 3,155,606 - +0.9 3,155,891 + ABID97_RS15255 0.18 -0.4 3,155,891 + ABID97_RS15255 0.18 -1.3 3,156,114 - ABID97_RS15255 0.30 +0.8 3,156,209 + ABID97_RS15255 0.35 +0.1 3,156,290 + ABID97_RS15255 0.40 -1.1 3,156,341 + ABID97_RS15255 0.43 -1.4 3,156,342 - ABID97_RS15255 0.43 -0.1 3,156,342 - ABID97_RS15255 0.43 -0.1
Or see this region's nucleotide sequence