Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS09655 and ABID97_RS09660 are separated by 289 nucleotides ABID97_RS09660 and ABID97_RS09665 are separated by 6 nucleotides ABID97_RS09665 and ABID97_RS09670 are separated by 465 nucleotides ABID97_RS09670 and ABID97_RS09675 are separated by 202 nucleotides
ABID97_RS09655: ABID97_RS09655 - hypothetical protein, at 2,020,394 to 2,021,101
_RS09655
ABID97_RS09660: ABID97_RS09660 - tRNA-Asn, at 2,021,391 to 2,021,466
_RS09660
ABID97_RS09665: ABID97_RS09665 - tRNA-Met, at 2,021,473 to 2,021,548
_RS09665
ABID97_RS09670: ABID97_RS09670 - hypothetical protein, at 2,022,014 to 2,022,199
_RS09670
ABID97_RS09675: ABID97_RS09675 - HNH endonuclease signature motif containing protein, at 2,022,402 to 2,022,581
_RS09675
Position (kb)
2021
2022 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2020.731 kb on - strand, within ABID97_RS09655 at 2021.099 kb on + strand at 2021.104 kb on + strand at 2021.104 kb on + strand at 2021.105 kb on - strand at 2021.315 kb on + strand at 2021.315 kb on + strand at 2021.316 kb on - strand at 2021.316 kb on - strand at 2021.316 kb on - strand at 2021.381 kb on - strand at 2021.399 kb on - strand, within ABID97_RS09660 at 2021.481 kb on - strand, within ABID97_RS09665 at 2021.481 kb on - strand, within ABID97_RS09665 at 2021.492 kb on + strand, within ABID97_RS09665 at 2021.591 kb on - strand at 2021.670 kb on + strand at 2021.671 kb on - strand at 2021.671 kb on - strand at 2021.671 kb on - strand at 2021.671 kb on - strand at 2021.671 kb on - strand at 2021.671 kb on - strand at 2021.725 kb on + strand at 2021.725 kb on + strand at 2021.726 kb on - strand at 2021.848 kb on + strand at 2022.064 kb on - strand, within ABID97_RS09670 at 2022.496 kb on + strand, within ABID97_RS09675 at 2022.497 kb on - strand, within ABID97_RS09675 at 2022.497 kb on - strand, within ABID97_RS09675 at 2022.497 kb on - strand, within ABID97_RS09675
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,020,731 - ABID97_RS09655 0.48 -0.1 2,021,099 + -1.1 2,021,104 + -0.2 2,021,104 + +0.2 2,021,105 - -0.2 2,021,315 + +0.2 2,021,315 + -0.3 2,021,316 - +1.1 2,021,316 - +0.1 2,021,316 - +1.0 2,021,381 - +0.8 2,021,399 - ABID97_RS09660 0.11 -1.2 2,021,481 - ABID97_RS09665 0.11 -1.3 2,021,481 - ABID97_RS09665 0.11 -0.8 2,021,492 + ABID97_RS09665 0.25 +1.2 2,021,591 - -0.5 2,021,670 + +0.5 2,021,671 - +1.1 2,021,671 - +0.4 2,021,671 - -0.7 2,021,671 - +0.9 2,021,671 - -0.1 2,021,671 - -0.1 2,021,725 + +1.7 2,021,725 + -0.4 2,021,726 - +0.2 2,021,848 + +2.5 2,022,064 - ABID97_RS09670 0.27 -0.3 2,022,496 + ABID97_RS09675 0.52 +0.9 2,022,497 - ABID97_RS09675 0.53 +0.4 2,022,497 - ABID97_RS09675 0.53 -2.3 2,022,497 - ABID97_RS09675 0.53 +0.1
Or see this region's nucleotide sequence