Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS22775

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
5,125,758	-		PFLU_RS22765	0.53	+1.7
5,125,758	-		PFLU_RS22765	0.53	+1.6
5,125,868	+		PFLU_RS22765	0.69	-0.2
5,125,868	+		PFLU_RS22765	0.69	-2.3
5,125,868	+		PFLU_RS22765	0.69	+0.9
5,125,868	+		PFLU_RS22765	0.69	+1.5
5,125,869	-		PFLU_RS22765	0.69	+2.0
5,125,897	+		PFLU_RS22765	0.73	-0.5
5,125,897	+		PFLU_RS22765	0.73	+0.7
5,125,897	+		PFLU_RS22765	0.73	-1.8
5,125,898	-		PFLU_RS22765	0.73	-1.3
5,125,898	-		PFLU_RS22765	0.73	-2.6
5,125,898	-		PFLU_RS22765	0.73	-2.8
5,125,898	-		PFLU_RS22765	0.73	-0.0
5,125,898	-		PFLU_RS22765	0.73	-0.5
5,125,954	+		PFLU_RS22765	0.81	+0.1
5,125,955	-		PFLU_RS22765	0.81	+0.8
5,125,955	-		PFLU_RS22765	0.81	+2.4
5,125,955	-		PFLU_RS22765	0.81	-0.8
5,125,955	-		PFLU_RS22765	0.81	+1.1
5,125,999	+		PFLU_RS22765	0.88	-1.7
5,126,109	+				+0.4
5,126,109	+				-0.4
5,126,109	+				+0.3
5,126,110	-				+0.3
5,126,110	-				-0.8
5,126,158	+				+1.4
5,126,158	+				-1.0
5,126,158	+				-1.3
5,126,159	-				+0.8
5,126,159	-				-1.0
5,126,159	-				-0.6
5,126,190	+				+4.3
5,126,191	-				-1.6
5,126,199	-				+1.0
5,126,205	+				+1.3
5,126,205	+				-0.4
5,126,205	+				+0.4
5,126,205	+				-3.6
5,126,205	+				+4.1
5,126,206	-				-0.5
5,126,432	+		PFLU_RS22770	0.66	+1.7
5,126,432	+		PFLU_RS22770	0.66	+3.1
5,126,432	+		PFLU_RS22770	0.66	+0.2
5,126,432	+		PFLU_RS22770	0.66	+0.9
5,126,522	+				+0.7
5,126,522	+				+0.8
5,126,523	-				+0.4
5,126,523	-				+0.3
5,126,523	-				-2.2
5,126,523	-				+0.6
5,126,756	+		PFLU_RS22775	0.25	+1.2
5,126,843	+		PFLU_RS22775	0.40	-2.7
5,126,844	-		PFLU_RS22775	0.40	-0.4
5,126,846	+		PFLU_RS22775	0.40	-0.6
5,126,846	+		PFLU_RS22775	0.40	+0.4
5,126,846	+		PFLU_RS22775	0.40	-1.9
5,126,893	+		PFLU_RS22775	0.49	+1.6
5,126,894	-		PFLU_RS22775	0.49	+0.6
5,126,918	+		PFLU_RS22775	0.53	-0.5
5,126,918	+		PFLU_RS22775	0.53	-1.8
5,126,918	+		PFLU_RS22775	0.53	-2.3
5,126,918	+		PFLU_RS22775	0.53	-2.3
5,126,918	+		PFLU_RS22775	0.53	+1.5
5,126,919	-		PFLU_RS22775	0.53	+1.7
5,126,919	-		PFLU_RS22775	0.53	+1.3
5,126,940	-		PFLU_RS22775	0.57	-1.7
5,126,940	-		PFLU_RS22775	0.57	-0.4
5,126,940	-		PFLU_RS22775	0.57	-3.3
5,126,940	-		PFLU_RS22775	0.57	-0.8
5,127,094	+		PFLU_RS22775	0.83	+0.2
5,127,094	+		PFLU_RS22775	0.83	+1.5
5,127,134	+				+0.2
5,127,134	+				-1.3
5,127,166	+				-1.6
5,127,166	+				+1.3
5,127,167	-				+0.6
5,127,184	+				+2.0
5,127,184	+				-1.7
5,127,185	-				+0.8
5,127,185	-				+3.0
5,127,201	+				-0.1
5,127,217	-				-3.4
5,127,217	-				-0.6
5,127,253	+				-2.7
5,127,253	+				-0.0
5,127,253	+				-1.9
5,127,253	+				+0.9
5,127,253	+				-1.7
5,127,253	+				-0.8
5,127,253	+				-0.5
5,127,253	+				+0.9
5,127,254	-				-1.1
5,127,254	-				+0.6
5,127,254	-				-3.1
5,127,308	+				-0.6
5,127,308	+				+2.2
5,127,309	-				+1.4
5,127,309	-				-1.9
5,127,309	-				-1.2
5,127,314	+		PFLU_RS22780	0.11	+2.4
5,127,314	+		PFLU_RS22780	0.11	-2.5
5,127,314	+		PFLU_RS22780	0.11	+1.7
5,127,314	+		PFLU_RS22780	0.11	+0.7
5,127,315	-		PFLU_RS22780	0.11	+1.6
5,127,315	-		PFLU_RS22780	0.11	+0.3
5,127,315	-		PFLU_RS22780	0.11	+0.1
5,127,315	-		PFLU_RS22780	0.11	-2.3
5,127,327	+		PFLU_RS22780	0.14	+0.8
5,127,328	-		PFLU_RS22780	0.15	+1.9
5,127,431	+		PFLU_RS22780	0.43	-1.7
5,127,432	-		PFLU_RS22780	0.43	+0.2
5,127,470	+		PFLU_RS22780	0.53	-0.5
5,127,470	+		PFLU_RS22780	0.53	+0.7
5,127,471	-		PFLU_RS22780	0.53	+1.8
5,127,494	+		PFLU_RS22780	0.60	+0.4
5,127,494	+		PFLU_RS22780	0.60	-0.3
5,127,495	-		PFLU_RS22780	0.60	+0.9
5,127,495	-		PFLU_RS22780	0.60	+1.0
5,127,548	+		PFLU_RS22780	0.74	-1.7
5,127,548	+		PFLU_RS22780	0.74	+1.0
5,127,548	+		PFLU_RS22780	0.74	-0.2
5,127,548	+		PFLU_RS22780	0.74	-0.3
5,127,549	-		PFLU_RS22780	0.75	-0.4
5,127,549	-		PFLU_RS22780	0.75	-1.3
5,127,593	+		PFLU_RS22780	0.86	-3.3
5,127,593	+		PFLU_RS22780	0.86	-0.0
5,127,593	+		PFLU_RS22780	0.86	+0.6
5,127,593	+		PFLU_RS22780	0.86	+0.8
5,127,593	+		PFLU_RS22780	0.86	+1.0
5,127,593	+		PFLU_RS22780	0.86	-0.2
5,127,593	+		PFLU_RS22780	0.86	+1.0
5,127,593	+		PFLU_RS22780	0.86	+0.9
5,127,593	+		PFLU_RS22780	0.86	+1.1
5,127,593	+		PFLU_RS22780	0.86	-2.2
5,127,593	+		PFLU_RS22780	0.86	+1.3
5,127,593	+		PFLU_RS22780	0.86	+1.6
5,127,593	+		PFLU_RS22780	0.86	-1.1
5,127,593	+		PFLU_RS22780	0.86	+3.0
5,127,593	+		PFLU_RS22780	0.86	+0.6
5,127,594	-		PFLU_RS22780	0.87	-1.5
5,127,594	-		PFLU_RS22780	0.87	-1.5
5,127,594	-		PFLU_RS22780	0.87	-2.0
5,127,594	-		PFLU_RS22780	0.87	+2.3
5,127,594	-		PFLU_RS22780	0.87	-0.3
5,127,594	-		PFLU_RS22780	0.87	-2.7
5,127,594	-		PFLU_RS22780	0.87	-1.3
5,127,594	-		PFLU_RS22780	0.87	+0.8
5,127,596	+		PFLU_RS22780	0.87	-2.5
5,127,596	+		PFLU_RS22780	0.87	-0.2
5,127,596	+		PFLU_RS22780	0.87	+3.1
5,127,596	+		PFLU_RS22780	0.87	-1.7
5,127,597	-		PFLU_RS22780	0.88	-0.7
5,127,597	-		PFLU_RS22780	0.88	+1.2
5,127,597	-		PFLU_RS22780	0.88	+1.2
5,127,597	-		PFLU_RS22780	0.88	-0.1
5,127,631	+				+1.3
5,127,632	-				+1.2
5,127,644	+				+1.1
5,127,644	+				-1.7
5,127,644	+				+0.7
5,127,644	+				-0.9
5,127,644	+				-1.9
5,127,644	+				+1.4
5,127,645	-				-0.8
5,127,645	-				+1.4
5,127,645	-				-2.6
5,127,663	+				-0.4
5,127,683	+				+0.7
5,127,684	-				+1.6
5,127,713	+				-3.1
5,127,713	+				+0.3
5,127,714	-				+0.4
5,127,714	-				-0.3
5,127,730	+				+1.3
5,127,766	+				-2.4
5,127,766	+				-1.5
5,127,815	-				+0.2
5,127,830	+				-0.4
5,127,848	+				+2.7
5,127,848	+				+0.8
5,127,848	+				-1.4
5,127,848	+				-0.0
5,127,848	+				-2.3
5,127,848	+				+0.8
5,127,848	+				+1.1
5,127,848	+				-1.1
5,127,848	+				-0.3
5,127,848	+				-2.2
5,127,849	-				+0.9
5,127,849	-				+0.0
5,127,849	-				-0.8
5,127,849	-				+0.4
5,127,849	-				-0.9
5,127,849	-				+0.2
5,127,849	-				+0.9
5,127,849	-				+1.9
5,127,849	-				+0.2
5,127,849	-				-1.0
5,127,849	-				-1.0
5,127,849	-				-0.5
5,127,849	-				-0.1
5,127,849	-				-2.4
5,127,849	-				+0.5
5,127,849	-				+0.7
5,127,849	-				+0.7
5,127,849	-				+0.1
5,127,886	+				-2.3
5,127,886	+				+0.3
5,127,886	+				-1.0
5,127,886	+				-1.3
5,127,887	-				+3.6
5,127,887	-				+1.7
5,127,896	+				+3.0
5,127,897	-				-2.1
5,127,897	-				-1.7
5,127,897	-				+0.7
5,127,973	-				+0.5
5,127,993	-		PFLU_RS22785	0.11	+2.4
5,127,993	-		PFLU_RS22785	0.11	-0.5
5,128,181	-		PFLU_RS22785	0.29	+0.5