Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS21510

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
4,837,161	-		PFLU_RS21505	0.75	+0.0
4,837,250	+		PFLU_RS21505	0.78	+0.5
4,837,250	+		PFLU_RS21505	0.78	-1.6
4,837,250	+		PFLU_RS21505	0.78	-3.1
4,837,250	+		PFLU_RS21505	0.78	+0.5
4,837,250	+		PFLU_RS21505	0.78	+2.6
4,837,250	+		PFLU_RS21505	0.78	-0.1
4,837,250	+		PFLU_RS21505	0.78	-2.0
4,837,250	+		PFLU_RS21505	0.78	+2.2
4,837,251	-		PFLU_RS21505	0.78	+1.7
4,837,251	-		PFLU_RS21505	0.78	+1.0
4,837,251	-		PFLU_RS21505	0.78	-2.4
4,837,251	-		PFLU_RS21505	0.78	+1.5
4,837,251	-		PFLU_RS21505	0.78	+0.7
4,837,406	+		PFLU_RS21505	0.83	+1.7
4,837,407	-		PFLU_RS21505	0.84	-1.0
4,837,407	-		PFLU_RS21505	0.84	-1.4
4,837,417	+		PFLU_RS21505	0.84	-0.0
4,837,418	-		PFLU_RS21505	0.84	+1.0
4,837,418	-		PFLU_RS21505	0.84	-1.3
4,837,518	+		PFLU_RS21505	0.88	+1.1
4,837,518	+		PFLU_RS21505	0.88	+1.4
4,837,518	+		PFLU_RS21505	0.88	+0.3
4,837,518	+		PFLU_RS21505	0.88	+0.1
4,837,518	+		PFLU_RS21505	0.88	+1.8
4,837,518	+		PFLU_RS21505	0.88	+1.2
4,837,520	+		PFLU_RS21505	0.88	-2.5
4,837,520	+		PFLU_RS21505	0.88	+0.8
4,837,520	+		PFLU_RS21505	0.88	-2.5
4,837,521	-		PFLU_RS21505	0.88	+1.3
4,837,521	-		PFLU_RS21505	0.88	-0.0
4,837,582	-		PFLU_RS21505	0.90	+2.7
4,837,758	+				+0.8
4,837,758	+				-1.0
4,837,758	+				-0.9
4,837,758	+				+1.8
4,837,759	-				-2.5
4,837,759	-				+1.5
4,837,759	-				-2.1
4,837,759	-				-0.6
4,837,759	-				+1.1
4,837,762	+				-2.1
4,837,762	+				+1.4
4,837,763	-				-2.9
4,837,763	-				-0.1
4,837,763	-				+0.5
4,837,763	-				-0.6
4,837,773	+				-2.6
4,837,774	-				-2.3
4,837,774	-				+1.0
4,837,774	-				+0.4
4,837,836	+				+2.5
4,837,836	+				+0.3
4,837,837	-				+0.3
4,837,860	+				-0.6
4,837,879	+				-0.7
4,837,879	+				+1.9
4,837,880	-				+1.3
4,837,880	-				-0.7
4,837,880	-				+1.7
4,837,883	+				+1.0
4,837,883	+				-1.1
4,837,931	-				-1.0
4,837,996	-				+1.7
4,838,070	+				+0.3
4,838,079	-				+0.1
4,838,079	-				-0.2
4,838,128	+				-0.1
4,838,128	+				+1.0
4,838,129	-				-2.1
4,838,129	-				+0.2
4,838,168	+				-0.0
4,838,169	-				+1.3
4,838,169	-				-0.7
4,838,181	+				+0.2
4,838,182	-				-0.2
4,838,205	-				-0.8
4,838,205	-				+2.8
4,838,280	+		PFLU_RS21510	0.11	-0.0
4,838,281	-		PFLU_RS21510	0.12	-2.4
4,838,287	+		PFLU_RS21510	0.12	+0.1
4,838,287	+		PFLU_RS21510	0.12	-1.1
4,838,288	-		PFLU_RS21510	0.12	+2.6
4,838,288	-		PFLU_RS21510	0.12	-1.1
4,838,288	-		PFLU_RS21510	0.12	+0.3
4,838,346	-		PFLU_RS21510	0.15	-2.7
4,838,346	-		PFLU_RS21510	0.15	+1.0
4,838,363	+		PFLU_RS21510	0.15	+1.5
4,838,363	+		PFLU_RS21510	0.15	-0.9
4,838,363	+		PFLU_RS21510	0.15	-1.6
4,838,363	+		PFLU_RS21510	0.15	-1.4
4,838,364	-		PFLU_RS21510	0.15	-1.7
4,838,364	-		PFLU_RS21510	0.15	+0.9
4,838,404	+		PFLU_RS21510	0.17	-2.3
4,838,481	+		PFLU_RS21510	0.21	-0.3
4,838,481	+		PFLU_RS21510	0.21	+0.0
4,838,482	-		PFLU_RS21510	0.21	+0.9
4,838,482	-		PFLU_RS21510	0.21	+1.2
4,838,482	-		PFLU_RS21510	0.21	-0.8
4,838,542	+		PFLU_RS21510	0.24	+1.0
4,838,543	-		PFLU_RS21510	0.24	+1.2
4,838,543	-		PFLU_RS21510	0.24	-1.4
4,838,543	-		PFLU_RS21510	0.24	+2.2
4,838,543	-		PFLU_RS21510	0.24	-0.0
4,838,543	-		PFLU_RS21510	0.24	-0.4
4,838,550	+		PFLU_RS21510	0.24	+0.3
4,838,551	-		PFLU_RS21510	0.24	-0.3
4,838,551	-		PFLU_RS21510	0.24	-1.9
4,838,574	+		PFLU_RS21510	0.25	-1.6
4,838,574	+		PFLU_RS21510	0.25	-0.3
4,838,574	+		PFLU_RS21510	0.25	-2.0
4,838,574	+		PFLU_RS21510	0.25	-1.7
4,838,574	+		PFLU_RS21510	0.25	+1.6
4,838,574	+		PFLU_RS21510	0.25	-0.2
4,838,575	-		PFLU_RS21510	0.25	-3.2
4,838,575	-		PFLU_RS21510	0.25	-0.5
4,838,575	-		PFLU_RS21510	0.25	+1.9
4,838,599	+		PFLU_RS21510	0.27	+0.2
4,838,599	+		PFLU_RS21510	0.27	+0.0
4,838,634	+		PFLU_RS21510	0.28	+1.0
4,838,635	-		PFLU_RS21510	0.28	-1.1
4,838,684	+		PFLU_RS21510	0.31	-1.3
4,838,685	-		PFLU_RS21510	0.31	+0.4
4,838,721	+		PFLU_RS21510	0.32	-0.0
4,838,727	+		PFLU_RS21510	0.33	-1.1
4,838,727	+		PFLU_RS21510	0.33	+1.1
4,838,727	+		PFLU_RS21510	0.33	+1.8
4,838,727	+		PFLU_RS21510	0.33	+1.9
4,838,728	-		PFLU_RS21510	0.33	+0.8
4,838,728	-		PFLU_RS21510	0.33	+0.4
4,838,728	-		PFLU_RS21510	0.33	-0.8
4,838,728	-		PFLU_RS21510	0.33	+0.2
4,838,787	-		PFLU_RS21510	0.35	-0.7
4,838,827	+		PFLU_RS21510	0.37	-2.7
4,838,827	+		PFLU_RS21510	0.37	+0.4
4,838,827	+		PFLU_RS21510	0.37	+2.4
4,838,828	-		PFLU_RS21510	0.37	+0.8
4,838,828	-		PFLU_RS21510	0.37	-2.9
4,838,941	-		PFLU_RS21510	0.43	+0.9
4,838,941	-		PFLU_RS21510	0.43	-3.1
4,839,026	+		PFLU_RS21510	0.47	+1.3
4,839,026	+		PFLU_RS21510	0.47	+2.0
4,839,360	+		PFLU_RS21510	0.63	-1.4
4,839,410	-		PFLU_RS21510	0.65	+2.1
4,839,483	+		PFLU_RS21510	0.68	-0.3
4,839,483	+		PFLU_RS21510	0.68	+1.1
4,839,485	+		PFLU_RS21510	0.69	+2.8
4,839,485	+		PFLU_RS21510	0.69	+2.7
4,839,485	+		PFLU_RS21510	0.69	+0.8
4,839,485	+		PFLU_RS21510	0.69	+1.0
4,839,485	+		PFLU_RS21510	0.69	+0.6
4,839,485	+		PFLU_RS21510	0.69	+0.5
4,839,485	+		PFLU_RS21510	0.69	-0.6
4,839,485	+		PFLU_RS21510	0.69	-2.2
4,839,486	-		PFLU_RS21510	0.69	+1.8
4,839,486	-		PFLU_RS21510	0.69	+0.2
4,839,486	-		PFLU_RS21510	0.69	+1.2
4,839,486	-		PFLU_RS21510	0.69	-2.3
4,839,486	-		PFLU_RS21510	0.69	-1.4
4,839,486	-		PFLU_RS21510	0.69	-0.9
4,839,486	-		PFLU_RS21510	0.69	+1.6
4,839,495	+		PFLU_RS21510	0.69	+0.3
4,839,495	+		PFLU_RS21510	0.69	-1.9
4,839,495	+		PFLU_RS21510	0.69	+1.8
4,839,495	+		PFLU_RS21510	0.69	-2.3
4,839,495	+		PFLU_RS21510	0.69	+1.3
4,839,496	-		PFLU_RS21510	0.69	-0.2
4,839,496	-		PFLU_RS21510	0.69	-1.3
4,839,496	-		PFLU_RS21510	0.69	+2.5
4,839,502	+		PFLU_RS21510	0.69	-2.5
4,839,503	-		PFLU_RS21510	0.69	+0.3
4,839,538	+		PFLU_RS21510	0.71	-0.3
4,839,538	+		PFLU_RS21510	0.71	-1.8
4,839,538	+		PFLU_RS21510	0.71	-1.3
4,839,538	+		PFLU_RS21510	0.71	-1.2
4,839,538	+		PFLU_RS21510	0.71	+0.9
4,839,539	-		PFLU_RS21510	0.71	-0.5
4,839,539	-		PFLU_RS21510	0.71	+0.1
4,839,539	-		PFLU_RS21510	0.71	-1.9
4,839,539	-		PFLU_RS21510	0.71	+1.1
4,839,539	-		PFLU_RS21510	0.71	-2.0
4,839,648	-		PFLU_RS21510	0.76	+1.2
4,839,648	-		PFLU_RS21510	0.76	-0.1
4,839,731	-		PFLU_RS21510	0.80	-1.9
4,839,731	-		PFLU_RS21510	0.80	-1.8
4,839,771	+		PFLU_RS21510	0.82	-0.4
4,839,772	-		PFLU_RS21510	0.82	-2.1
4,839,772	-		PFLU_RS21510	0.82	-1.3
4,839,818	+		PFLU_RS21510	0.84	-0.2
4,839,818	+		PFLU_RS21510	0.84	-0.7
4,839,818	+		PFLU_RS21510	0.84	-2.1
4,839,818	+		PFLU_RS21510	0.84	+2.1
4,839,818	+		PFLU_RS21510	0.84	-0.8
4,839,819	-		PFLU_RS21510	0.84	-2.5
4,839,823	+		PFLU_RS21510	0.85	-1.0
4,839,823	+		PFLU_RS21510	0.85	+0.3
4,839,823	+		PFLU_RS21510	0.85	+2.3
4,839,823	+		PFLU_RS21510	0.85	+3.7
4,839,823	+		PFLU_RS21510	0.85	+0.4
4,839,824	-		PFLU_RS21510	0.85	+2.0
4,839,869	+		PFLU_RS21510	0.87	+0.8
4,839,870	-		PFLU_RS21510	0.87	+1.7
4,839,870	-		PFLU_RS21510	0.87	-0.4
4,839,887	+		PFLU_RS21510	0.88	-0.9
4,839,887	+		PFLU_RS21510	0.88	+0.2
4,839,887	+		PFLU_RS21510	0.88	-0.4
4,839,887	+		PFLU_RS21510	0.88	-0.4
4,839,888	-		PFLU_RS21510	0.88	+1.9
4,839,888	-		PFLU_RS21510	0.88	+0.3
4,839,888	-		PFLU_RS21510	0.88	-1.2
4,839,888	-		PFLU_RS21510	0.88	-0.0
4,839,888	-		PFLU_RS21510	0.88	-0.2
4,839,888	-		PFLU_RS21510	0.88	+2.0
4,839,888	-		PFLU_RS21510	0.88	-0.4
4,839,888	-		PFLU_RS21510	0.88	+0.1
4,839,906	+		PFLU_RS21510	0.88	-0.4
4,839,907	-		PFLU_RS21510	0.88	-1.4
4,839,954	+				+2.4
4,839,985	+				+0.7
4,839,988	-				+3.5
4,839,988	-				-1.9
4,840,034	+				+1.3
4,840,034	+				+0.8
4,840,035	-				-1.9
4,840,035	-				-0.3
4,840,051	+				-1.7
4,840,051	+				-0.2
4,840,051	+				-2.7
4,840,051	+				-2.1
4,840,051	+				-0.1
4,840,051	+				+0.5
4,840,051	+				-0.1
4,840,051	+				-1.4
4,840,052	-				-2.0
4,840,052	-				+0.8
4,840,052	-				-1.1
4,840,052	-				-0.3
4,840,171	-				-0.0
4,840,417	-				-0.3
4,840,417	-				-0.2
4,840,417	-				-0.5
4,840,417	-				-0.4
4,840,507	-				+0.3
4,840,544	+				-0.9
4,840,544	+				+1.4
4,840,545	-				-0.7
4,840,545	-				+1.0
4,840,545	-				+2.4
4,840,545	-				-1.3
4,840,545	-				+0.3
4,840,649	-				-0.5
4,840,649	-				-1.0
4,840,654	-				-1.0
4,840,707	+				-2.6
4,840,735	+				+0.7
4,840,735	+				+0.5
4,840,736	-				+0.3
4,840,736	-				-0.0
4,840,736	-				-0.1
4,840,774	-				-0.3
4,840,802	+				+1.9
4,840,802	+				-0.7
4,840,802	+				-0.2
4,840,802	+				-0.9
4,840,802	+				-0.1
4,840,802	+				-0.7
4,840,803	-				-1.4
4,840,803	-				-0.5
4,840,803	-				+1.8
4,840,803	-				+3.0
4,840,803	-				+3.1
4,840,803	-				+1.3
4,840,803	-				+1.3
4,840,803	-				+0.5
4,840,803	-				+1.8
4,840,832	+				+1.5
4,840,832	+				+0.3
4,840,832	+				+4.0
4,840,832	+				+0.9
4,840,833	-				+3.6
4,840,833	-				-1.7
4,840,833	-				-3.2
4,840,833	-				-0.4
4,840,846	+				+0.3
4,840,847	-				-1.1
4,840,853	+				+0.4
4,840,854	-				-0.7
4,840,871	-				+0.6
4,840,888	+				-3.1
4,840,888	+				-0.9
4,840,889	-				-1.7
4,841,011	+				+0.6
4,841,011	+				-0.6
4,841,012	-				+0.1
4,841,013	+				-1.1
4,841,013	+				-0.1
4,841,013	+				-2.4
4,841,013	+				-0.4
4,841,013	+				-0.1
4,841,013	+				-0.5
4,841,013	+				-0.9
4,841,014	-				-0.9
4,841,014	-				+0.8
4,841,014	-				+0.5
4,841,014	-				+0.2
4,841,014	-				+1.4
4,841,014	-				+2.0
4,841,014	-				+0.7