Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS15705

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,535,330	+		PFLU_RS15700	0.68	-2.2
3,535,363	+		PFLU_RS15700	0.69	+2.5
3,535,363	+		PFLU_RS15700	0.69	-0.2
3,535,364	-		PFLU_RS15700	0.69	-2.9
3,535,370	+		PFLU_RS15700	0.70	+0.3
3,535,370	+		PFLU_RS15700	0.70	+0.7
3,535,370	+		PFLU_RS15700	0.70	+1.6
3,535,370	+		PFLU_RS15700	0.70	-0.7
3,535,371	-		PFLU_RS15700	0.70	+1.3
3,535,371	-		PFLU_RS15700	0.70	+1.2
3,535,371	-		PFLU_RS15700	0.70	-0.2
3,535,768	+		PFLU_RS15700	0.83	+0.1
3,535,768	+		PFLU_RS15700	0.83	-0.3
3,535,768	+		PFLU_RS15700	0.83	+0.6
3,535,768	+		PFLU_RS15700	0.83	-1.3
3,535,768	+		PFLU_RS15700	0.83	-0.7
3,535,789	+		PFLU_RS15700	0.84	+1.4
3,535,843	+		PFLU_RS15700	0.85	-1.0
3,535,843	+		PFLU_RS15700	0.85	-2.7
3,535,843	+		PFLU_RS15700	0.85	+0.1
3,535,843	+		PFLU_RS15700	0.85	-1.5
3,535,844	-		PFLU_RS15700	0.85	-1.7
3,535,844	-		PFLU_RS15700	0.85	-1.3
3,535,844	-		PFLU_RS15700	0.85	+2.5
3,536,071	-				+0.4
3,536,438	+				-2.4
3,536,751	-				+0.3
3,536,751	-				+2.4
3,536,797	+				-1.8
3,536,798	-				+2.1
3,536,798	-				-0.6
3,536,832	-				+0.1
3,536,854	+				-1.3
3,536,855	-				+0.3
3,536,855	-				-0.3
3,536,891	+				+1.7
3,536,891	+				-2.4
3,536,891	+				-0.9
3,536,892	-				-0.3
3,536,892	-				+0.5
3,536,892	-				-1.0
3,536,998	-				-1.7
3,537,112	+				+0.4
3,537,152	+				-0.4
3,537,506	+				-0.3
3,537,560	+				-0.1
3,537,561	-				+0.8
3,537,742	+		PFLU_RS15705	0.10	-0.1
3,537,742	+		PFLU_RS15705	0.10	-0.1
3,537,742	+		PFLU_RS15705	0.10	-2.5
3,537,743	-		PFLU_RS15705	0.10	-0.7
3,537,743	-		PFLU_RS15705	0.10	+0.8
3,537,750	-		PFLU_RS15705	0.10	+4.1
3,537,827	+		PFLU_RS15705	0.11	+1.7
3,537,827	+		PFLU_RS15705	0.11	+1.3
3,537,827	+		PFLU_RS15705	0.11	-0.6
3,537,828	-		PFLU_RS15705	0.11	+0.8
3,537,828	-		PFLU_RS15705	0.11	-1.0
3,537,828	-		PFLU_RS15705	0.11	+0.7
3,537,828	-		PFLU_RS15705	0.11	-0.4
3,537,828	-		PFLU_RS15705	0.11	-2.9
3,538,194	-		PFLU_RS15705	0.13	+0.7
3,538,265	-		PFLU_RS15705	0.14	-1.0
3,538,265	-		PFLU_RS15705	0.14	-2.6
3,538,342	+		PFLU_RS15705	0.14	+0.6
3,538,343	-		PFLU_RS15705	0.14	-2.9
3,538,393	+		PFLU_RS15705	0.15	+0.6
3,538,394	-		PFLU_RS15705	0.15	+0.5
3,538,464	+		PFLU_RS15705	0.15	+0.0
3,538,546	-		PFLU_RS15705	0.16	+1.1
3,538,549	-		PFLU_RS15705	0.16	+1.3
3,538,702	+		PFLU_RS15705	0.17	-1.0
3,538,703	-		PFLU_RS15705	0.17	+2.2
3,538,703	-		PFLU_RS15705	0.17	-1.3
3,538,739	+		PFLU_RS15705	0.17	+2.6
3,538,739	+		PFLU_RS15705	0.17	+1.3
3,538,739	+		PFLU_RS15705	0.17	+2.2
3,538,739	+		PFLU_RS15705	0.17	+0.1
3,538,739	+		PFLU_RS15705	0.17	+0.7
3,538,740	-		PFLU_RS15705	0.17	+0.9
3,538,740	-		PFLU_RS15705	0.17	+0.8
3,538,740	-		PFLU_RS15705	0.17	-0.0
3,539,087	+		PFLU_RS15705	0.20	-0.7
3,539,088	-		PFLU_RS15705	0.20	+0.3
3,539,159	+		PFLU_RS15705	0.20	-2.0
3,539,159	+		PFLU_RS15705	0.20	-0.7
3,539,159	+		PFLU_RS15705	0.20	-3.4
3,539,159	+		PFLU_RS15705	0.20	+0.3
3,539,159	+		PFLU_RS15705	0.20	-1.9
3,539,160	-		PFLU_RS15705	0.20	-1.7
3,539,160	-		PFLU_RS15705	0.20	+0.9
3,539,160	-		PFLU_RS15705	0.20	-1.5
3,539,160	-		PFLU_RS15705	0.20	-2.5
3,539,160	-		PFLU_RS15705	0.20	+0.3
3,539,160	-		PFLU_RS15705	0.20	-1.4
3,539,332	-		PFLU_RS15705	0.22	+0.9
3,540,032	+		PFLU_RS15705	0.27	+1.2
3,540,242	+		PFLU_RS15705	0.28	+0.0
3,540,242	+		PFLU_RS15705	0.28	-1.5
3,540,242	+		PFLU_RS15705	0.28	+0.3
3,540,242	+		PFLU_RS15705	0.28	-0.1
3,540,243	-		PFLU_RS15705	0.28	+2.5
3,540,258	+		PFLU_RS15705	0.28	-0.3
3,540,401	-		PFLU_RS15705	0.29	-1.9
3,540,624	-		PFLU_RS15705	0.31	+1.7
3,541,088	+		PFLU_RS15705	0.34	+1.1
3,541,088	+		PFLU_RS15705	0.34	-0.9
3,541,089	-		PFLU_RS15705	0.34	+0.0
3,541,089	-		PFLU_RS15705	0.34	+1.6
3,541,089	-		PFLU_RS15705	0.34	-1.4
3,541,093	-		PFLU_RS15705	0.34	+1.3
3,541,093	-		PFLU_RS15705	0.34	-1.9
3,541,093	-		PFLU_RS15705	0.34	+1.5
3,541,196	+		PFLU_RS15705	0.35	+0.5
3,541,196	+		PFLU_RS15705	0.35	-0.9
3,541,196	+		PFLU_RS15705	0.35	+2.9
3,541,197	-		PFLU_RS15705	0.35	+3.3
3,541,197	-		PFLU_RS15705	0.35	+0.9
3,541,238	+		PFLU_RS15705	0.35	+0.8
3,541,238	+		PFLU_RS15705	0.35	-2.2
3,541,238	+		PFLU_RS15705	0.35	+1.0
3,541,238	+		PFLU_RS15705	0.35	-0.7
3,541,239	-		PFLU_RS15705	0.35	-0.4
3,541,239	-		PFLU_RS15705	0.35	-0.8
3,541,403	+		PFLU_RS15705	0.36	+2.6
3,541,403	+		PFLU_RS15705	0.36	-2.2
3,541,403	+		PFLU_RS15705	0.36	+1.8
3,541,404	-		PFLU_RS15705	0.36	-1.9
3,541,404	-		PFLU_RS15705	0.36	+0.7
3,541,412	+		PFLU_RS15705	0.37	+1.3
3,541,412	+		PFLU_RS15705	0.37	-2.0
3,541,412	+		PFLU_RS15705	0.37	-1.6
3,541,412	+		PFLU_RS15705	0.37	+1.5
3,541,412	+		PFLU_RS15705	0.37	+0.7
3,541,412	+		PFLU_RS15705	0.37	+2.5
3,541,412	+		PFLU_RS15705	0.37	+1.5
3,541,412	+		PFLU_RS15705	0.37	+1.4
3,541,412	+		PFLU_RS15705	0.37	+1.0
3,541,412	+		PFLU_RS15705	0.37	+0.8
3,541,412	+		PFLU_RS15705	0.37	-1.2
3,541,412	+		PFLU_RS15705	0.37	-0.4
3,541,412	+		PFLU_RS15705	0.37	-0.3
3,541,412	+		PFLU_RS15705	0.37	+2.8
3,541,412	+		PFLU_RS15705	0.37	-0.6
3,541,413	-		PFLU_RS15705	0.37	+1.0
3,541,413	-		PFLU_RS15705	0.37	-2.2
3,541,413	-		PFLU_RS15705	0.37	+1.2
3,541,413	-		PFLU_RS15705	0.37	+1.1
3,541,413	-		PFLU_RS15705	0.37	-2.4
3,541,413	-		PFLU_RS15705	0.37	+0.6
3,541,413	-		PFLU_RS15705	0.37	-0.4
3,541,413	-		PFLU_RS15705	0.37	-0.5
3,541,413	-		PFLU_RS15705	0.37	-1.3
3,541,413	-		PFLU_RS15705	0.37	-1.5
3,541,413	-		PFLU_RS15705	0.37	-3.0
3,541,413	-		PFLU_RS15705	0.37	+0.6
3,541,544	+		PFLU_RS15705	0.37	-0.8
3,541,545	-		PFLU_RS15705	0.37	-2.9
3,541,545	-		PFLU_RS15705	0.37	+2.1
3,541,607	+		PFLU_RS15705	0.38	+0.2
3,541,705	+		PFLU_RS15705	0.39	-0.3
3,541,706	-		PFLU_RS15705	0.39	+0.4
3,541,749	-		PFLU_RS15705	0.39	+1.1
3,541,841	-		PFLU_RS15705	0.40	+0.8
3,541,844	+		PFLU_RS15705	0.40	+0.5
3,541,844	+		PFLU_RS15705	0.40	-0.7
3,541,845	-		PFLU_RS15705	0.40	+1.1
3,541,935	+		PFLU_RS15705	0.40	-0.9
3,541,935	+		PFLU_RS15705	0.40	-2.8
3,541,935	+		PFLU_RS15705	0.40	-0.4
3,541,935	+		PFLU_RS15705	0.40	+0.7
3,541,935	+		PFLU_RS15705	0.40	+0.4
3,541,936	-		PFLU_RS15705	0.40	+1.3
3,541,936	-		PFLU_RS15705	0.40	+0.3
3,541,936	-		PFLU_RS15705	0.40	-1.3
3,541,936	-		PFLU_RS15705	0.40	+0.3
3,541,943	+		PFLU_RS15705	0.40	-2.0
3,541,943	+		PFLU_RS15705	0.40	+0.7
3,541,943	+		PFLU_RS15705	0.40	-0.0
3,541,943	+		PFLU_RS15705	0.40	+2.4
3,541,943	+		PFLU_RS15705	0.40	+0.4
3,541,943	+		PFLU_RS15705	0.40	-1.7
3,541,943	+		PFLU_RS15705	0.40	+1.0
3,541,943	+		PFLU_RS15705	0.40	+1.9
3,541,943	+		PFLU_RS15705	0.40	-0.7
3,541,943	+		PFLU_RS15705	0.40	+0.3
3,541,943	+		PFLU_RS15705	0.40	+0.2
3,541,943	+		PFLU_RS15705	0.40	-2.3
3,541,943	+		PFLU_RS15705	0.40	-0.0
3,541,943	+		PFLU_RS15705	0.40	+3.0
3,541,943	+		PFLU_RS15705	0.40	-0.5
3,541,944	-		PFLU_RS15705	0.40	-0.7
3,541,944	-		PFLU_RS15705	0.40	+0.4
3,541,944	-		PFLU_RS15705	0.40	-0.2
3,541,944	-		PFLU_RS15705	0.40	+0.9
3,541,944	-		PFLU_RS15705	0.40	-2.0
3,541,944	-		PFLU_RS15705	0.40	-1.0
3,541,944	-		PFLU_RS15705	0.40	+1.1
3,542,062	+		PFLU_RS15705	0.41	+0.6
3,542,102	+		PFLU_RS15705	0.41	-0.2
3,542,102	+		PFLU_RS15705	0.41	-0.3
3,542,102	+		PFLU_RS15705	0.41	+1.8
3,542,103	-		PFLU_RS15705	0.41	+1.6
3,542,103	-		PFLU_RS15705	0.41	+0.1
3,542,150	+		PFLU_RS15705	0.42	+0.2
3,542,274	+		PFLU_RS15705	0.43	+0.3
3,542,275	-		PFLU_RS15705	0.43	+1.1
3,542,275	-		PFLU_RS15705	0.43	-0.9
3,542,300	+		PFLU_RS15705	0.43	+1.6
3,542,300	+		PFLU_RS15705	0.43	+2.5
3,542,300	+		PFLU_RS15705	0.43	+0.8
3,542,301	-		PFLU_RS15705	0.43	-1.2
3,542,369	+		PFLU_RS15705	0.43	-0.1
3,542,369	+		PFLU_RS15705	0.43	+2.2
3,542,369	+		PFLU_RS15705	0.43	+3.3
3,542,369	+		PFLU_RS15705	0.43	+0.3
3,542,370	-		PFLU_RS15705	0.43	-0.9
3,542,370	-		PFLU_RS15705	0.43	+0.9
3,542,370	-		PFLU_RS15705	0.43	-1.5
3,542,370	-		PFLU_RS15705	0.43	-0.3
3,542,370	-		PFLU_RS15705	0.43	+0.8
3,542,370	-		PFLU_RS15705	0.43	+0.0
3,542,370	-		PFLU_RS15705	0.43	+2.3
3,542,535	+		PFLU_RS15705	0.45	+1.5
3,542,535	+		PFLU_RS15705	0.45	+2.2
3,542,536	-		PFLU_RS15705	0.45	+2.9
3,542,536	-		PFLU_RS15705	0.45	+1.4
3,542,829	-		PFLU_RS15705	0.47	+0.8
3,543,151	+		PFLU_RS15705	0.49	+0.3
3,543,151	+		PFLU_RS15705	0.49	+2.1
3,543,152	-		PFLU_RS15705	0.49	+0.0
3,543,218	+		PFLU_RS15705	0.50	-1.5
3,543,219	-		PFLU_RS15705	0.50	+0.3
3,543,503	+		PFLU_RS15705	0.52	-2.3
3,543,504	-		PFLU_RS15705	0.52	+1.5
3,543,504	-		PFLU_RS15705	0.52	+0.3
3,543,504	-		PFLU_RS15705	0.52	-0.0
3,543,545	+		PFLU_RS15705	0.52	-0.5
3,543,968	-		PFLU_RS15705	0.55	+2.0
3,544,119	-		PFLU_RS15705	0.56	+1.3
3,544,141	+		PFLU_RS15705	0.56	+1.4
3,544,983	-		PFLU_RS15705	0.62	+0.4
3,544,983	-		PFLU_RS15705	0.62	-1.7
3,544,983	-		PFLU_RS15705	0.62	-1.9
3,544,983	-		PFLU_RS15705	0.62	+1.0
3,545,084	-		PFLU_RS15705	0.63	+0.4
3,545,317	+		PFLU_RS15705	0.65	-1.9
3,545,661	+		PFLU_RS15705	0.67	+1.0
3,545,661	+		PFLU_RS15705	0.67	-1.0
3,545,749	+		PFLU_RS15705	0.68	+0.3
3,545,749	+		PFLU_RS15705	0.68	+1.6
3,545,749	+		PFLU_RS15705	0.68	+0.7
3,545,749	+		PFLU_RS15705	0.68	+1.3
3,545,750	-		PFLU_RS15705	0.68	+3.9
3,545,750	-		PFLU_RS15705	0.68	-0.9
3,545,928	-		PFLU_RS15705	0.69	+1.5
3,546,359	+		PFLU_RS15705	0.72	+1.0
3,546,359	+		PFLU_RS15705	0.72	+1.3
3,546,359	+		PFLU_RS15705	0.72	+0.1
3,546,359	+		PFLU_RS15705	0.72	+0.2
3,546,360	-		PFLU_RS15705	0.72	+1.9
3,546,360	-		PFLU_RS15705	0.72	-2.6
3,546,360	-		PFLU_RS15705	0.72	+2.4
3,546,590	+		PFLU_RS15705	0.74	-0.2
3,546,590	+		PFLU_RS15705	0.74	-2.4
3,546,591	-		PFLU_RS15705	0.74	-0.7
3,546,591	-		PFLU_RS15705	0.74	+0.4
3,547,228	+		PFLU_RS15705	0.78	+2.0
3,547,302	-		PFLU_RS15705	0.79	-0.4
3,548,104	-		PFLU_RS15705	0.85	+2.2
3,548,498	+		PFLU_RS15705	0.87	-0.2
3,548,499	-		PFLU_RS15705	0.87	+0.3
3,548,499	-		PFLU_RS15705	0.87	-0.8
3,548,551	-		PFLU_RS15705	0.88	+0.5
3,548,558	+		PFLU_RS15705	0.88	+1.3
3,548,558	+		PFLU_RS15705	0.88	-1.5
3,548,558	+		PFLU_RS15705	0.88	-2.0
3,548,558	+		PFLU_RS15705	0.88	+1.6
3,548,558	+		PFLU_RS15705	0.88	+0.6
3,548,558	+		PFLU_RS15705	0.88	+2.0
3,548,558	+		PFLU_RS15705	0.88	-0.7
3,548,558	+		PFLU_RS15705	0.88	+0.8
3,548,559	-		PFLU_RS15705	0.88	-1.0
3,548,559	-		PFLU_RS15705	0.88	+0.3
3,548,559	-		PFLU_RS15705	0.88	+0.8
3,548,559	-		PFLU_RS15705	0.88	+0.7
3,548,559	-		PFLU_RS15705	0.88	-0.7
3,548,560	+		PFLU_RS15705	0.88	-2.0
3,548,560	+		PFLU_RS15705	0.88	-1.2
3,548,561	-		PFLU_RS15705	0.88	+1.0
3,548,561	-		PFLU_RS15705	0.88	-0.8
3,548,561	-		PFLU_RS15705	0.88	+0.5
3,548,561	-		PFLU_RS15705	0.88	+0.4
3,548,561	-		PFLU_RS15705	0.88	-2.0
3,548,561	-		PFLU_RS15705	0.88	+1.5
3,548,561	-		PFLU_RS15705	0.88	+0.3
3,549,282	-				-0.7
3,549,353	+				-1.0
3,549,353	+				-1.0
3,549,353	+				-0.3
3,549,354	-				+0.4
3,549,556	+				+3.1
3,550,316	+				+0.1
3,550,316	+				-0.8
3,550,316	+				+0.3
3,550,382	+				+1.3
3,550,382	+				+1.4
3,550,383	-				-1.0
3,550,385	+				-0.7
3,550,385	+				+1.7
3,550,386	-				+0.5
3,550,773	-				-2.0
3,550,829	+				-0.0
3,550,830	-				-1.0
3,551,109	-				+0.9
3,551,109	-				-0.8
3,551,180	-				-0.7