Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS09410

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
2,078,701	-				+0.5
2,078,807	+				-0.4
2,078,807	+				+0.1
2,078,807	+				+0.2
2,078,807	+				-2.4
2,078,808	-				+1.0
2,078,808	-				-0.5
2,078,808	-				+0.8
2,078,808	-				-3.2
2,078,808	-				+0.4
2,078,849	+		PFLU_RS31255	0.19	+0.0
2,078,849	+		PFLU_RS31255	0.19	+0.4
2,078,849	+		PFLU_RS31255	0.19	+0.1
2,078,905	+		PFLU_RS31255	0.42	-2.3
2,078,906	-		PFLU_RS31255	0.43	+1.5
2,078,906	-		PFLU_RS31255	0.43	-0.1
2,078,909	+		PFLU_RS31255	0.44	+0.3
2,078,909	+		PFLU_RS31255	0.44	+2.7
2,078,909	+		PFLU_RS31255	0.44	+2.6
2,078,909	+		PFLU_RS31255	0.44	+0.4
2,078,910	-		PFLU_RS31255	0.44	-0.5
2,078,910	-		PFLU_RS31255	0.44	+0.4
2,078,910	-		PFLU_RS31255	0.44	-3.2
2,079,010	-		PFLU_RS31255	0.86	-0.1
2,079,010	-		PFLU_RS31255	0.86	-0.2
2,079,026	+				+1.2
2,079,026	+				+3.0
2,079,026	+				-0.9
2,079,026	+				+1.1
2,079,026	+				+1.3
2,079,026	+				+2.0
2,079,026	+				-0.4
2,079,026	+				-0.0
2,079,026	+				+0.1
2,079,027	-				-0.7
2,079,027	-				-0.5
2,079,027	-				+0.2
2,079,027	-				+1.2
2,079,027	-				+0.4
2,079,048	-				+1.8
2,079,048	-				-0.2
2,079,048	-				-2.0
2,079,083	+				-1.5
2,079,083	+				-2.9
2,079,083	+				+1.3
2,079,083	+				+0.6
2,079,084	-				-2.2
2,079,084	-				+0.3
2,079,149	+				-2.3
2,079,150	-				+0.1
2,079,312	+		PFLU_RS09405	0.12	+0.2
2,079,313	-		PFLU_RS09405	0.13	-0.2
2,079,400	+		PFLU_RS09405	0.45	+1.4
2,079,400	+		PFLU_RS09405	0.45	+1.1
2,079,400	+		PFLU_RS09405	0.45	-3.1
2,079,400	+		PFLU_RS09405	0.45	-3.1
2,079,400	+		PFLU_RS09405	0.45	+1.2
2,079,400	+		PFLU_RS09405	0.45	+0.2
2,079,401	-		PFLU_RS09405	0.46	-0.6
2,079,401	-		PFLU_RS09405	0.46	-0.9
2,079,401	-		PFLU_RS09405	0.46	-1.5
2,079,401	-		PFLU_RS09405	0.46	+0.1
2,079,401	-		PFLU_RS09405	0.46	+2.4
2,079,401	-		PFLU_RS09405	0.46	+0.5
2,079,401	-		PFLU_RS09405	0.46	-1.6
2,079,401	-		PFLU_RS09405	0.46	-0.4
2,079,401	-		PFLU_RS09405	0.46	+2.1
2,079,401	-		PFLU_RS09405	0.46	+0.0
2,079,418	-		PFLU_RS09405	0.52	+1.1
2,079,472	-		PFLU_RS09405	0.72	+1.9
2,079,472	-		PFLU_RS09405	0.72	+1.2
2,079,472	-		PFLU_RS09405	0.72	+0.2
2,079,532	+				+0.2
2,079,542	-				-0.5
2,079,552	+				-0.5
2,079,562	-				-1.0
2,079,765	+		PFLU_RS09410	0.55	-0.8
2,079,766	-		PFLU_RS09410	0.55	+2.2
2,079,766	-		PFLU_RS09410	0.55	+1.2
2,079,865	+		PFLU_RS09410	0.85	-0.6
2,079,865	+		PFLU_RS09410	0.85	-0.2
2,079,865	+		PFLU_RS09410	0.85	-0.2
2,079,865	+		PFLU_RS09410	0.85	-0.5
2,079,866	-		PFLU_RS09410	0.86	-1.8
2,079,866	-		PFLU_RS09410	0.86	-1.5
2,079,866	-		PFLU_RS09410	0.86	-0.7
2,079,866	-		PFLU_RS09410	0.86	-2.4
2,079,872	+		PFLU_RS09410	0.88	+0.4
2,079,873	-		PFLU_RS09410	0.88	-0.6
2,079,873	-		PFLU_RS09410	0.88	-1.0
2,079,924	+				+1.3
2,079,924	+				-0.1
2,079,924	+				-0.6
2,079,958	-				-1.0
2,079,996	+				+0.8
2,079,996	+				+0.6
2,079,996	+				+0.8
2,079,996	+				-0.2
2,080,025	+				-1.6
2,080,026	-				-2.1
2,080,026	-				+1.5
2,080,026	-				-0.9
2,080,100	-		PFLU_RS09415	0.29	-0.2
2,080,132	+		PFLU_RS09415	0.37	+1.0
2,080,132	+		PFLU_RS09415	0.37	-3.0
2,080,132	+		PFLU_RS09415	0.37	-1.2
2,080,133	-		PFLU_RS09415	0.38	+0.8
2,080,133	-		PFLU_RS09415	0.38	-2.3
2,080,133	-		PFLU_RS09415	0.38	+0.3
2,080,133	-		PFLU_RS09415	0.38	-1.3
2,080,237	+		PFLU_RS09415	0.66	-2.8
2,080,237	+		PFLU_RS09415	0.66	+0.9
2,080,238	-		PFLU_RS09415	0.66	-1.6
2,080,238	-		PFLU_RS09415	0.66	+0.2
2,080,288	+		PFLU_RS09415	0.80	+0.3
2,080,317	+		PFLU_RS09415	0.88	+0.2
2,080,317	+		PFLU_RS09415	0.88	-1.2
2,080,318	-		PFLU_RS09415	0.88	-2.1
2,080,318	-		PFLU_RS09415	0.88	+0.2
2,080,318	-		PFLU_RS09415	0.88	-1.5
2,080,374	+				-0.8
2,080,496	+		PFLU_RS09420	0.10	-0.6
2,080,496	+		PFLU_RS09420	0.10	+1.1
2,080,496	+		PFLU_RS09420	0.10	+2.5
2,080,496	+		PFLU_RS09420	0.10	-0.7
2,080,496	+		PFLU_RS09420	0.10	-1.0
2,080,496	+		PFLU_RS09420	0.10	-0.4
2,080,496	+		PFLU_RS09420	0.10	+2.0
2,080,496	+		PFLU_RS09420	0.10	+2.0
2,080,496	+		PFLU_RS09420	0.10	-2.3
2,080,496	+		PFLU_RS09420	0.10	-0.8
2,080,497	-		PFLU_RS09420	0.10	+0.1
2,080,497	-		PFLU_RS09420	0.10	+1.8
2,080,497	-		PFLU_RS09420	0.10	-2.2
2,080,523	+		PFLU_RS09420	0.12	-1.9
2,080,524	-		PFLU_RS09420	0.12	+0.0
2,080,524	-		PFLU_RS09420	0.12	+2.6
2,080,608	+		PFLU_RS09420	0.19	+2.5
2,080,608	+		PFLU_RS09420	0.19	-0.8
2,080,608	+		PFLU_RS09420	0.19	-2.3
2,080,609	-		PFLU_RS09420	0.19	-0.5
2,080,609	-		PFLU_RS09420	0.19	-0.9
2,080,611	+		PFLU_RS09420	0.19	-0.6
2,080,611	+		PFLU_RS09420	0.19	-0.9
2,080,611	+		PFLU_RS09420	0.19	+0.5
2,080,612	-		PFLU_RS09420	0.19	+1.4
2,080,612	-		PFLU_RS09420	0.19	+0.3
2,080,672	+		PFLU_RS09420	0.23	+1.7
2,080,672	+		PFLU_RS09420	0.23	+0.5
2,080,672	+		PFLU_RS09420	0.23	-0.9
2,080,672	+		PFLU_RS09420	0.23	+0.6
2,080,672	+		PFLU_RS09420	0.23	-0.5
2,080,672	+		PFLU_RS09420	0.23	+0.0
2,080,672	+		PFLU_RS09420	0.23	+2.9
2,080,672	+		PFLU_RS09420	0.23	+0.2
2,080,673	-		PFLU_RS09420	0.23	+2.6
2,080,673	-		PFLU_RS09420	0.23	-1.3
2,080,673	-		PFLU_RS09420	0.23	-3.2
2,080,673	-		PFLU_RS09420	0.23	+3.0
2,080,673	-		PFLU_RS09420	0.23	+0.9
2,080,673	-		PFLU_RS09420	0.23	-0.1
2,080,673	-		PFLU_RS09420	0.23	-0.5
2,080,673	-		PFLU_RS09420	0.23	+1.6
2,080,673	-		PFLU_RS09420	0.23	-1.0
2,080,673	-		PFLU_RS09420	0.23	+0.8
2,080,673	-		PFLU_RS09420	0.23	-0.5
2,080,673	-		PFLU_RS09420	0.23	+0.1
2,080,673	-		PFLU_RS09420	0.23	+0.2
2,080,673	-		PFLU_RS09420	0.23	-2.3
2,080,673	-		PFLU_RS09420	0.23	-1.0
2,080,713	-		PFLU_RS09420	0.26	-0.2
2,080,850	+		PFLU_RS09420	0.37	+0.2
2,080,850	+		PFLU_RS09420	0.37	+0.6
2,080,850	+		PFLU_RS09420	0.37	-0.4
2,080,850	+		PFLU_RS09420	0.37	-3.2
2,080,850	+		PFLU_RS09420	0.37	+1.8
2,080,850	+		PFLU_RS09420	0.37	-0.3
2,080,850	+		PFLU_RS09420	0.37	-0.3
2,080,850	+		PFLU_RS09420	0.37	-1.5
2,080,851	-		PFLU_RS09420	0.37	+1.5
2,080,851	-		PFLU_RS09420	0.37	+0.3
2,080,854	+		PFLU_RS09420	0.37	+0.2
2,080,854	+		PFLU_RS09420	0.37	+1.7
2,080,854	+		PFLU_RS09420	0.37	-2.6
2,080,854	+		PFLU_RS09420	0.37	-0.5
2,080,854	+		PFLU_RS09420	0.37	-1.3
2,080,855	-		PFLU_RS09420	0.37	+0.9
2,080,855	-		PFLU_RS09420	0.37	+0.8
2,080,868	+		PFLU_RS09420	0.38	+0.5
2,080,868	+		PFLU_RS09420	0.38	+0.8
2,080,869	-		PFLU_RS09420	0.38	-1.3
2,080,878	+		PFLU_RS09420	0.39	+2.3