Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_22510 and OH686_22515 overlap by 1 nucleotides OH686_22515 and OH686_22520 overlap by 4 nucleotides OH686_22520 and OH686_22525 overlap by 20 nucleotides
OH686_22510: OH686_22510 - Putative permease, at 4,572,170 to 4,572,910
_22510
OH686_22515: OH686_22515 - hypothetical protein, at 4,572,910 to 4,573,692
_22515
OH686_22520: OH686_22520 - hypothetical protein, at 4,573,689 to 4,574,606
_22520
OH686_22525: OH686_22525 - Monooxygenase, flavin-binding family, at 4,574,587 to 4,575,963
_22525
Position (kb)
4573
4574
4575 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4572.741 kb on + strand, within OH686_22510 at 4572.741 kb on + strand, within OH686_22510 at 4572.742 kb on - strand, within OH686_22510 at 4572.865 kb on - strand at 4572.865 kb on - strand at 4572.865 kb on - strand at 4572.865 kb on - strand at 4572.894 kb on + strand at 4572.895 kb on - strand at 4572.895 kb on - strand at 4572.903 kb on + strand at 4572.904 kb on - strand at 4572.904 kb on - strand at 4572.951 kb on - strand at 4572.953 kb on + strand at 4572.953 kb on + strand at 4572.953 kb on + strand at 4572.953 kb on + strand at 4572.953 kb on + strand at 4572.953 kb on + strand at 4572.954 kb on - strand at 4572.954 kb on - strand at 4572.954 kb on - strand at 4572.954 kb on - strand at 4572.954 kb on - strand at 4572.954 kb on - strand at 4572.954 kb on - strand at 4572.954 kb on - strand at 4572.954 kb on - strand at 4572.954 kb on - strand at 4573.045 kb on + strand, within OH686_22515 at 4573.045 kb on + strand, within OH686_22515 at 4573.045 kb on + strand, within OH686_22515 at 4573.045 kb on + strand, within OH686_22515 at 4573.045 kb on + strand, within OH686_22515 at 4573.046 kb on - strand, within OH686_22515 at 4573.046 kb on - strand, within OH686_22515 at 4573.046 kb on - strand, within OH686_22515 at 4573.046 kb on - strand, within OH686_22515 at 4573.046 kb on - strand, within OH686_22515 at 4573.134 kb on + strand, within OH686_22515 at 4573.134 kb on + strand, within OH686_22515 at 4573.135 kb on - strand, within OH686_22515 at 4573.179 kb on + strand, within OH686_22515 at 4573.179 kb on + strand, within OH686_22515 at 4573.179 kb on + strand, within OH686_22515 at 4573.179 kb on + strand, within OH686_22515 at 4573.180 kb on - strand, within OH686_22515 at 4573.180 kb on - strand, within OH686_22515 at 4573.180 kb on - strand, within OH686_22515 at 4573.253 kb on + strand, within OH686_22515 at 4573.328 kb on - strand, within OH686_22515 at 4573.328 kb on - strand, within OH686_22515 at 4573.370 kb on + strand, within OH686_22515 at 4573.371 kb on - strand, within OH686_22515 at 4573.371 kb on - strand, within OH686_22515 at 4573.384 kb on + strand, within OH686_22515 at 4573.384 kb on + strand, within OH686_22515 at 4573.384 kb on + strand, within OH686_22515 at 4573.384 kb on + strand, within OH686_22515 at 4573.384 kb on + strand, within OH686_22515 at 4573.385 kb on - strand, within OH686_22515 at 4573.385 kb on - strand, within OH686_22515 at 4573.385 kb on - strand, within OH686_22515 at 4573.385 kb on - strand, within OH686_22515 at 4573.931 kb on - strand, within OH686_22520 at 4573.965 kb on + strand, within OH686_22520 at 4573.965 kb on + strand, within OH686_22520 at 4573.966 kb on - strand, within OH686_22520 at 4573.966 kb on - strand, within OH686_22520 at 4573.966 kb on - strand, within OH686_22520 at 4573.966 kb on - strand, within OH686_22520 at 4574.043 kb on + strand, within OH686_22520 at 4574.043 kb on + strand, within OH686_22520 at 4574.043 kb on + strand, within OH686_22520 at 4574.043 kb on + strand, within OH686_22520 at 4574.044 kb on - strand, within OH686_22520 at 4574.044 kb on - strand, within OH686_22520 at 4574.044 kb on - strand, within OH686_22520 at 4574.044 kb on - strand, within OH686_22520 at 4574.230 kb on + strand, within OH686_22520 at 4574.230 kb on + strand, within OH686_22520 at 4574.231 kb on - strand, within OH686_22520 at 4574.658 kb on + strand at 4574.658 kb on + strand at 4574.658 kb on + strand at 4574.658 kb on + strand at 4574.658 kb on + strand at 4574.658 kb on + strand at 4574.659 kb on - strand at 4574.659 kb on - strand at 4574.659 kb on - strand at 4574.659 kb on - strand at 4574.659 kb on - strand at 4574.681 kb on + strand at 4574.681 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.699 kb on + strand at 4574.700 kb on - strand at 4574.700 kb on - strand at 4574.700 kb on - strand at 4574.700 kb on - strand at 4574.700 kb on - strand at 4574.700 kb on - strand at 4574.700 kb on - strand at 4574.700 kb on - strand at 4574.700 kb on - strand at 4574.700 kb on - strand at 4574.700 kb on - strand at 4574.700 kb on - strand at 4574.700 kb on - strand at 4574.700 kb on - strand at 4574.700 kb on - strand at 4574.700 kb on - strand at 4574.700 kb on - strand at 4574.700 kb on - strand at 4574.702 kb on + strand at 4574.702 kb on + strand at 4574.702 kb on + strand at 4574.702 kb on + strand at 4574.703 kb on - strand at 4574.703 kb on - strand at 4574.703 kb on - strand at 4574.727 kb on - strand, within OH686_22525 at 4574.933 kb on + strand, within OH686_22525 at 4574.933 kb on + strand, within OH686_22525 at 4574.933 kb on + strand, within OH686_22525 at 4574.933 kb on + strand, within OH686_22525 at 4574.933 kb on + strand, within OH686_22525 at 4574.933 kb on + strand, within OH686_22525 at 4574.934 kb on - strand, within OH686_22525 at 4574.934 kb on - strand, within OH686_22525 at 4574.993 kb on + strand, within OH686_22525 at 4574.993 kb on + strand, within OH686_22525 at 4575.032 kb on + strand, within OH686_22525 at 4575.032 kb on + strand, within OH686_22525 at 4575.033 kb on - strand, within OH686_22525 at 4575.033 kb on - strand, within OH686_22525 at 4575.087 kb on + strand, within OH686_22525 at 4575.161 kb on + strand, within OH686_22525 at 4575.161 kb on + strand, within OH686_22525 at 4575.162 kb on - strand, within OH686_22525 at 4575.162 kb on - strand, within OH686_22525 at 4575.162 kb on - strand, within OH686_22525 at 4575.162 kb on - strand, within OH686_22525 at 4575.162 kb on - strand, within OH686_22525 at 4575.171 kb on - strand, within OH686_22525 at 4575.191 kb on + strand, within OH686_22525 at 4575.191 kb on + strand, within OH686_22525 at 4575.238 kb on + strand, within OH686_22525 at 4575.239 kb on - strand, within OH686_22525 at 4575.239 kb on - strand, within OH686_22525 at 4575.239 kb on - strand, within OH686_22525 at 4575.282 kb on + strand, within OH686_22525 at 4575.449 kb on + strand, within OH686_22525 at 4575.449 kb on + strand, within OH686_22525 at 4575.450 kb on - strand, within OH686_22525 at 4575.450 kb on - strand, within OH686_22525 at 4575.450 kb on - strand, within OH686_22525
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 4,572,741 + OH686_22510 0.77 -0.9 4,572,741 + OH686_22510 0.77 -0.7 4,572,742 - OH686_22510 0.77 -0.8 4,572,865 - -0.1 4,572,865 - +0.2 4,572,865 - -0.8 4,572,865 - -0.4 4,572,894 + -0.5 4,572,895 - +0.1 4,572,895 - +0.1 4,572,903 + -0.5 4,572,904 - -0.2 4,572,904 - +0.6 4,572,951 - +0.3 4,572,953 + +0.6 4,572,953 + +0.8 4,572,953 + +0.1 4,572,953 + +0.3 4,572,953 + -0.5 4,572,953 + +0.2 4,572,954 - -1.1 4,572,954 - +0.8 4,572,954 - -0.2 4,572,954 - +0.8 4,572,954 - +0.8 4,572,954 - -0.2 4,572,954 - +0.7 4,572,954 - +0.2 4,572,954 - +0.1 4,572,954 - -0.9 4,573,045 + OH686_22515 0.17 +0.1 4,573,045 + OH686_22515 0.17 +0.1 4,573,045 + OH686_22515 0.17 -0.5 4,573,045 + OH686_22515 0.17 -0.5 4,573,045 + OH686_22515 0.17 -0.7 4,573,046 - OH686_22515 0.17 +0.7 4,573,046 - OH686_22515 0.17 -0.2 4,573,046 - OH686_22515 0.17 -0.7 4,573,046 - OH686_22515 0.17 +0.8 4,573,046 - OH686_22515 0.17 +0.8 4,573,134 + OH686_22515 0.29 +0.5 4,573,134 + OH686_22515 0.29 -0.4 4,573,135 - OH686_22515 0.29 +0.0 4,573,179 + OH686_22515 0.34 +0.6 4,573,179 + OH686_22515 0.34 +0.1 4,573,179 + OH686_22515 0.34 +0.5 4,573,179 + OH686_22515 0.34 -1.2 4,573,180 - OH686_22515 0.34 -0.6 4,573,180 - OH686_22515 0.34 -0.2 4,573,180 - OH686_22515 0.34 -0.7 4,573,253 + OH686_22515 0.44 -0.0 4,573,328 - OH686_22515 0.53 -1.0 4,573,328 - OH686_22515 0.53 +0.2 4,573,370 + OH686_22515 0.59 +0.8 4,573,371 - OH686_22515 0.59 -0.2 4,573,371 - OH686_22515 0.59 -0.0 4,573,384 + OH686_22515 0.61 -0.7 4,573,384 + OH686_22515 0.61 +0.1 4,573,384 + OH686_22515 0.61 -0.2 4,573,384 + OH686_22515 0.61 -0.2 4,573,384 + OH686_22515 0.61 -0.6 4,573,385 - OH686_22515 0.61 -2.7 4,573,385 - OH686_22515 0.61 -0.8 4,573,385 - OH686_22515 0.61 +0.3 4,573,385 - OH686_22515 0.61 -0.3 4,573,931 - OH686_22520 0.26 -1.2 4,573,965 + OH686_22520 0.30 +0.4 4,573,965 + OH686_22520 0.30 -1.7 4,573,966 - OH686_22520 0.30 +0.3 4,573,966 - OH686_22520 0.30 -0.3 4,573,966 - OH686_22520 0.30 -0.0 4,573,966 - OH686_22520 0.30 +0.4 4,574,043 + OH686_22520 0.39 +0.9 4,574,043 + OH686_22520 0.39 +0.0 4,574,043 + OH686_22520 0.39 -1.9 4,574,043 + OH686_22520 0.39 -0.3 4,574,044 - OH686_22520 0.39 +0.5 4,574,044 - OH686_22520 0.39 +0.5 4,574,044 - OH686_22520 0.39 +0.4 4,574,044 - OH686_22520 0.39 +0.2 4,574,230 + OH686_22520 0.59 +0.6 4,574,230 + OH686_22520 0.59 +0.8 4,574,231 - OH686_22520 0.59 -0.2 4,574,658 + +1.0 4,574,658 + +0.6 4,574,658 + -0.1 4,574,658 + -1.0 4,574,658 + +0.0 4,574,658 + -0.6 4,574,659 - -0.9 4,574,659 - -0.3 4,574,659 - +0.3 4,574,659 - +0.1 4,574,659 - +0.5 4,574,681 + -0.4 4,574,681 + -1.1 4,574,699 + +0.4 4,574,699 + -1.3 4,574,699 + +0.2 4,574,699 + +0.4 4,574,699 + +0.2 4,574,699 + +0.5 4,574,699 + -0.7 4,574,699 + -0.2 4,574,699 + -0.1 4,574,699 + +0.7 4,574,699 + -0.1 4,574,699 + +0.1 4,574,699 + +0.3 4,574,699 + -0.5 4,574,699 + +0.3 4,574,699 + +0.5 4,574,699 + -0.2 4,574,699 + -0.2 4,574,699 + +0.5 4,574,699 + +0.0 4,574,700 - -0.4 4,574,700 - +0.1 4,574,700 - +0.2 4,574,700 - +0.4 4,574,700 - -0.9 4,574,700 - +0.6 4,574,700 - -0.3 4,574,700 - -0.1 4,574,700 - +0.4 4,574,700 - -0.5 4,574,700 - -0.5 4,574,700 - +0.2 4,574,700 - -0.1 4,574,700 - +0.3 4,574,700 - +1.0 4,574,700 - -0.0 4,574,700 - +0.7 4,574,700 - -0.3 4,574,702 + -1.1 4,574,702 + +0.3 4,574,702 + -0.2 4,574,702 + -0.0 4,574,703 - +1.1 4,574,703 - +0.4 4,574,703 - -0.8 4,574,727 - OH686_22525 0.10 -0.1 4,574,933 + OH686_22525 0.25 -0.3 4,574,933 + OH686_22525 0.25 +0.3 4,574,933 + OH686_22525 0.25 +0.9 4,574,933 + OH686_22525 0.25 -0.5 4,574,933 + OH686_22525 0.25 -1.1 4,574,933 + OH686_22525 0.25 -1.0 4,574,934 - OH686_22525 0.25 -0.5 4,574,934 - OH686_22525 0.25 -0.2 4,574,993 + OH686_22525 0.29 -0.1 4,574,993 + OH686_22525 0.29 +0.7 4,575,032 + OH686_22525 0.32 +0.6 4,575,032 + OH686_22525 0.32 -0.5 4,575,033 - OH686_22525 0.32 +0.2 4,575,033 - OH686_22525 0.32 -0.5 4,575,087 + OH686_22525 0.36 +0.0 4,575,161 + OH686_22525 0.42 +0.6 4,575,161 + OH686_22525 0.42 -0.3 4,575,162 - OH686_22525 0.42 -0.6 4,575,162 - OH686_22525 0.42 -0.0 4,575,162 - OH686_22525 0.42 -0.5 4,575,162 - OH686_22525 0.42 +0.6 4,575,162 - OH686_22525 0.42 +0.2 4,575,171 - OH686_22525 0.42 -0.7 4,575,191 + OH686_22525 0.44 -0.7 4,575,191 + OH686_22525 0.44 -0.4 4,575,238 + OH686_22525 0.47 -1.5 4,575,239 - OH686_22525 0.47 +0.1 4,575,239 - OH686_22525 0.47 -0.5 4,575,239 - OH686_22525 0.47 -0.6 4,575,282 + OH686_22525 0.50 +0.7 4,575,449 + OH686_22525 0.63 -0.8 4,575,449 + OH686_22525 0.63 -0.5 4,575,450 - OH686_22525 0.63 +0.8 4,575,450 - OH686_22525 0.63 +0.3 4,575,450 - OH686_22525 0.63 +1.8
Or see this region's nucleotide sequence