Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_21825 and OH686_21830 overlap by 4 nucleotides OH686_21830 and OH686_21835 overlap by 33 nucleotides OH686_21835 and OH686_21840 are separated by 75 nucleotides
OH686_21825: OH686_21825 - lipid kinase YegS, at 4,445,425 to 4,446,324
_21825
OH686_21830: OH686_21830 - Two-component transcriptional response regulator, NarL/FixJ family, at 4,446,321 to 4,446,965
_21830
OH686_21835: OH686_21835 - CDS, at 4,446,933 to 4,447,079
_21835
OH686_21840: OH686_21840 - Chemotaxis response regulator protein-glutamate methylesterase CheB , at 4,447,155 to 4,448,228
_21840
Position (kb)
4446
4447
4448 Strain fitness (log2 ratio)
-2
-1
0
1 at 4446.075 kb on + strand, within OH686_21825 at 4446.076 kb on - strand, within OH686_21825 at 4446.076 kb on - strand, within OH686_21825 at 4446.112 kb on - strand, within OH686_21825 at 4446.297 kb on + strand at 4446.297 kb on + strand at 4446.358 kb on + strand at 4446.358 kb on + strand at 4446.358 kb on + strand at 4446.358 kb on + strand at 4446.358 kb on + strand at 4446.358 kb on + strand at 4446.358 kb on + strand at 4446.358 kb on + strand at 4446.358 kb on + strand at 4446.358 kb on + strand at 4446.358 kb on + strand at 4446.358 kb on + strand at 4446.358 kb on + strand at 4446.359 kb on - strand at 4446.359 kb on - strand at 4446.359 kb on - strand at 4446.359 kb on - strand at 4446.359 kb on - strand at 4446.483 kb on - strand, within OH686_21830 at 4446.483 kb on - strand, within OH686_21830 at 4446.483 kb on - strand, within OH686_21830 at 4446.593 kb on - strand, within OH686_21830 at 4446.593 kb on - strand, within OH686_21830 at 4446.661 kb on + strand, within OH686_21830 at 4446.661 kb on + strand, within OH686_21830 at 4446.661 kb on + strand, within OH686_21830 at 4446.661 kb on + strand, within OH686_21830 at 4446.661 kb on + strand, within OH686_21830 at 4446.661 kb on + strand, within OH686_21830 at 4446.661 kb on + strand, within OH686_21830 at 4446.662 kb on - strand, within OH686_21830 at 4446.693 kb on + strand, within OH686_21830 at 4446.693 kb on + strand, within OH686_21830 at 4446.694 kb on - strand, within OH686_21830 at 4446.694 kb on - strand, within OH686_21830 at 4447.077 kb on + strand at 4447.078 kb on - strand at 4447.078 kb on - strand at 4447.078 kb on - strand at 4447.078 kb on - strand at 4447.078 kb on - strand at 4447.078 kb on - strand at 4447.078 kb on - strand at 4447.078 kb on - strand at 4447.078 kb on - strand at 4447.078 kb on - strand at 4447.090 kb on + strand at 4447.091 kb on - strand at 4447.091 kb on - strand at 4447.105 kb on + strand at 4447.105 kb on + strand at 4447.105 kb on + strand at 4447.105 kb on + strand at 4447.106 kb on - strand at 4447.106 kb on - strand at 4447.106 kb on - strand at 4447.109 kb on + strand at 4447.110 kb on - strand at 4447.110 kb on - strand at 4447.110 kb on - strand at 4447.150 kb on + strand at 4447.150 kb on + strand at 4447.150 kb on + strand at 4447.150 kb on + strand at 4447.150 kb on + strand at 4447.150 kb on + strand at 4447.151 kb on - strand at 4447.151 kb on - strand at 4447.151 kb on - strand at 4447.151 kb on - strand at 4447.151 kb on - strand at 4447.401 kb on + strand, within OH686_21840 at 4447.401 kb on + strand, within OH686_21840 at 4447.401 kb on + strand, within OH686_21840 at 4447.401 kb on + strand, within OH686_21840 at 4447.401 kb on + strand, within OH686_21840 at 4447.401 kb on + strand, within OH686_21840 at 4447.401 kb on + strand, within OH686_21840 at 4447.401 kb on + strand, within OH686_21840 at 4447.401 kb on + strand, within OH686_21840 at 4447.401 kb on + strand, within OH686_21840 at 4447.401 kb on + strand, within OH686_21840 at 4447.401 kb on + strand, within OH686_21840 at 4447.402 kb on - strand, within OH686_21840 at 4447.402 kb on - strand, within OH686_21840 at 4447.402 kb on - strand, within OH686_21840 at 4447.402 kb on - strand, within OH686_21840 at 4447.402 kb on - strand, within OH686_21840 at 4447.402 kb on - strand, within OH686_21840 at 4447.402 kb on - strand, within OH686_21840 at 4447.402 kb on - strand, within OH686_21840 at 4447.402 kb on - strand, within OH686_21840 at 4447.402 kb on - strand, within OH686_21840 at 4447.402 kb on - strand, within OH686_21840 at 4447.402 kb on - strand, within OH686_21840 at 4447.402 kb on - strand, within OH686_21840 at 4447.459 kb on + strand, within OH686_21840 at 4447.459 kb on + strand, within OH686_21840 at 4447.459 kb on + strand, within OH686_21840 at 4447.459 kb on + strand, within OH686_21840 at 4447.460 kb on - strand, within OH686_21840 at 4447.460 kb on - strand, within OH686_21840 at 4447.460 kb on - strand, within OH686_21840 at 4447.460 kb on - strand, within OH686_21840 at 4447.507 kb on - strand, within OH686_21840 at 4447.961 kb on + strand, within OH686_21840 at 4448.006 kb on + strand, within OH686_21840 at 4448.007 kb on - strand, within OH686_21840 at 4448.079 kb on + strand, within OH686_21840 at 4448.079 kb on + strand, within OH686_21840 at 4448.079 kb on + strand, within OH686_21840 at 4448.079 kb on + strand, within OH686_21840
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 4,446,075 + OH686_21825 0.72 -0.0 4,446,076 - OH686_21825 0.72 +0.9 4,446,076 - OH686_21825 0.72 +0.6 4,446,112 - OH686_21825 0.76 -0.3 4,446,297 + -0.8 4,446,297 + +0.7 4,446,358 + +0.6 4,446,358 + +0.8 4,446,358 + -0.3 4,446,358 + +0.2 4,446,358 + +1.1 4,446,358 + +0.8 4,446,358 + +0.1 4,446,358 + -1.3 4,446,358 + -0.1 4,446,358 + +0.8 4,446,358 + +0.8 4,446,358 + -0.1 4,446,358 + -0.6 4,446,359 - -0.2 4,446,359 - -0.8 4,446,359 - +0.7 4,446,359 - +0.1 4,446,359 - +0.1 4,446,483 - OH686_21830 0.25 +0.1 4,446,483 - OH686_21830 0.25 -0.2 4,446,483 - OH686_21830 0.25 +0.7 4,446,593 - OH686_21830 0.42 +0.4 4,446,593 - OH686_21830 0.42 -0.5 4,446,661 + OH686_21830 0.53 +0.3 4,446,661 + OH686_21830 0.53 -1.6 4,446,661 + OH686_21830 0.53 +0.2 4,446,661 + OH686_21830 0.53 +0.5 4,446,661 + OH686_21830 0.53 -0.4 4,446,661 + OH686_21830 0.53 +0.0 4,446,661 + OH686_21830 0.53 +0.2 4,446,662 - OH686_21830 0.53 -0.4 4,446,693 + OH686_21830 0.58 -0.2 4,446,693 + OH686_21830 0.58 -0.3 4,446,694 - OH686_21830 0.58 -0.7 4,446,694 - OH686_21830 0.58 +0.8 4,447,077 + +0.5 4,447,078 - -0.3 4,447,078 - -0.3 4,447,078 - -1.9 4,447,078 - -0.5 4,447,078 - -0.7 4,447,078 - +0.0 4,447,078 - +0.4 4,447,078 - -1.0 4,447,078 - -0.3 4,447,078 - -0.1 4,447,090 + -0.3 4,447,091 - -0.2 4,447,091 - -0.2 4,447,105 + -0.2 4,447,105 + -0.3 4,447,105 + -0.5 4,447,105 + -0.1 4,447,106 - -1.2 4,447,106 - +0.6 4,447,106 - +0.1 4,447,109 + +0.4 4,447,110 - -0.4 4,447,110 - +0.8 4,447,110 - +0.2 4,447,150 + -2.3 4,447,150 + +1.2 4,447,150 + -1.3 4,447,150 + -0.3 4,447,150 + -0.0 4,447,150 + +0.5 4,447,151 - -0.5 4,447,151 - +0.4 4,447,151 - +0.1 4,447,151 - -0.8 4,447,151 - -0.2 4,447,401 + OH686_21840 0.23 +0.5 4,447,401 + OH686_21840 0.23 -1.4 4,447,401 + OH686_21840 0.23 -0.9 4,447,401 + OH686_21840 0.23 +0.0 4,447,401 + OH686_21840 0.23 -0.0 4,447,401 + OH686_21840 0.23 -0.9 4,447,401 + OH686_21840 0.23 -0.4 4,447,401 + OH686_21840 0.23 -0.4 4,447,401 + OH686_21840 0.23 -0.1 4,447,401 + OH686_21840 0.23 -0.1 4,447,401 + OH686_21840 0.23 -0.0 4,447,401 + OH686_21840 0.23 +0.2 4,447,402 - OH686_21840 0.23 -0.0 4,447,402 - OH686_21840 0.23 +0.2 4,447,402 - OH686_21840 0.23 -1.1 4,447,402 - OH686_21840 0.23 +0.3 4,447,402 - OH686_21840 0.23 +0.4 4,447,402 - OH686_21840 0.23 -1.0 4,447,402 - OH686_21840 0.23 +1.3 4,447,402 - OH686_21840 0.23 +0.2 4,447,402 - OH686_21840 0.23 -0.6 4,447,402 - OH686_21840 0.23 +0.2 4,447,402 - OH686_21840 0.23 +0.4 4,447,402 - OH686_21840 0.23 -0.6 4,447,402 - OH686_21840 0.23 +1.4 4,447,459 + OH686_21840 0.28 -0.2 4,447,459 + OH686_21840 0.28 +0.6 4,447,459 + OH686_21840 0.28 -0.4 4,447,459 + OH686_21840 0.28 +0.2 4,447,460 - OH686_21840 0.28 +0.8 4,447,460 - OH686_21840 0.28 -0.3 4,447,460 - OH686_21840 0.28 +0.6 4,447,460 - OH686_21840 0.28 -2.0 4,447,507 - OH686_21840 0.33 -0.2 4,447,961 + OH686_21840 0.75 +0.3 4,448,006 + OH686_21840 0.79 -0.2 4,448,007 - OH686_21840 0.79 +0.3 4,448,079 + OH686_21840 0.86 +0.1 4,448,079 + OH686_21840 0.86 -1.3 4,448,079 + OH686_21840 0.86 +0.1 4,448,079 + OH686_21840 0.86 -0.7
Or see this region's nucleotide sequence