Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_20875 and OH686_20880 are separated by 4 nucleotides OH686_20880 and OH686_20885 overlap by 4 nucleotides OH686_20885 and OH686_20890 are separated by 143 nucleotides
OH686_20875: OH686_20875 - histidinol-phosphate transaminase, at 4,267,633 to 4,268,742
_20875
OH686_20880: OH686_20880 - 3-phosphoshikimate 1-carboxyvinyltransferase, at 4,268,747 to 4,270,978
_20880
OH686_20885: OH686_20885 - cytidylate kinase, at 4,270,975 to 4,271,640
_20885
OH686_20890: OH686_20890 - ribosomal protein S1, at 4,271,784 to 4,273,463
_20890
Position (kb) 4268
4269
4270
4271 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4267.932 kb on + strand, within OH686_20875 at 4267.993 kb on + strand, within OH686_20875 at 4267.993 kb on + strand, within OH686_20875 at 4268.230 kb on + strand, within OH686_20875 at 4268.230 kb on + strand, within OH686_20875 at 4268.230 kb on + strand, within OH686_20875 at 4268.230 kb on + strand, within OH686_20875 at 4268.275 kb on + strand, within OH686_20875 at 4268.326 kb on + strand, within OH686_20875 at 4268.326 kb on + strand, within OH686_20875 at 4268.326 kb on + strand, within OH686_20875 at 4268.353 kb on + strand, within OH686_20875 at 4268.464 kb on + strand, within OH686_20875 at 4268.465 kb on - strand, within OH686_20875 at 4268.763 kb on + strand at 4268.763 kb on + strand at 4268.764 kb on - strand at 4268.764 kb on - strand at 4268.764 kb on - strand at 4268.800 kb on - strand at 4268.983 kb on + strand, within OH686_20880 at 4268.983 kb on + strand, within OH686_20880 at 4268.983 kb on + strand, within OH686_20880 at 4268.984 kb on - strand, within OH686_20880 at 4268.984 kb on - strand, within OH686_20880 at 4268.984 kb on - strand, within OH686_20880 at 4269.510 kb on + strand, within OH686_20880 at 4269.510 kb on + strand, within OH686_20880 at 4269.510 kb on + strand, within OH686_20880 at 4269.511 kb on - strand, within OH686_20880 at 4269.644 kb on + strand, within OH686_20880 at 4269.644 kb on + strand, within OH686_20880 at 4269.644 kb on + strand, within OH686_20880 at 4269.644 kb on + strand, within OH686_20880 at 4269.644 kb on + strand, within OH686_20880 at 4269.644 kb on + strand, within OH686_20880 at 4269.644 kb on + strand, within OH686_20880 at 4269.644 kb on + strand, within OH686_20880 at 4269.645 kb on - strand, within OH686_20880 at 4269.645 kb on - strand, within OH686_20880 at 4269.645 kb on - strand, within OH686_20880 at 4269.645 kb on - strand, within OH686_20880 at 4269.645 kb on - strand, within OH686_20880 at 4269.645 kb on - strand, within OH686_20880 at 4269.645 kb on - strand, within OH686_20880 at 4269.645 kb on - strand, within OH686_20880 at 4269.645 kb on - strand, within OH686_20880 at 4269.645 kb on - strand, within OH686_20880 at 4269.645 kb on - strand, within OH686_20880 at 4269.645 kb on - strand, within OH686_20880 at 4269.645 kb on - strand, within OH686_20880 at 4269.645 kb on - strand, within OH686_20880 at 4271.692 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 4,267,932 + OH686_20875 0.27 -0.5 4,267,993 + OH686_20875 0.32 +0.1 4,267,993 + OH686_20875 0.32 -1.1 4,268,230 + OH686_20875 0.54 -0.3 4,268,230 + OH686_20875 0.54 +0.2 4,268,230 + OH686_20875 0.54 -0.1 4,268,230 + OH686_20875 0.54 -1.1 4,268,275 + OH686_20875 0.58 -0.3 4,268,326 + OH686_20875 0.62 -0.9 4,268,326 + OH686_20875 0.62 -1.7 4,268,326 + OH686_20875 0.62 -0.5 4,268,353 + OH686_20875 0.65 -1.4 4,268,464 + OH686_20875 0.75 +0.4 4,268,465 - OH686_20875 0.75 -1.0 4,268,763 + -1.2 4,268,763 + -0.0 4,268,764 - -0.5 4,268,764 - +0.1 4,268,764 - -0.1 4,268,800 - -2.7 4,268,983 + OH686_20880 0.11 -1.1 4,268,983 + OH686_20880 0.11 -1.8 4,268,983 + OH686_20880 0.11 +0.1 4,268,984 - OH686_20880 0.11 -0.8 4,268,984 - OH686_20880 0.11 -0.1 4,268,984 - OH686_20880 0.11 -2.0 4,269,510 + OH686_20880 0.34 +0.5 4,269,510 + OH686_20880 0.34 -0.2 4,269,510 + OH686_20880 0.34 -0.6 4,269,511 - OH686_20880 0.34 +0.5 4,269,644 + OH686_20880 0.40 -0.2 4,269,644 + OH686_20880 0.40 -0.0 4,269,644 + OH686_20880 0.40 -0.2 4,269,644 + OH686_20880 0.40 -0.2 4,269,644 + OH686_20880 0.40 +0.2 4,269,644 + OH686_20880 0.40 -1.3 4,269,644 + OH686_20880 0.40 -0.4 4,269,644 + OH686_20880 0.40 +0.6 4,269,645 - OH686_20880 0.40 -0.2 4,269,645 - OH686_20880 0.40 -2.1 4,269,645 - OH686_20880 0.40 -1.2 4,269,645 - OH686_20880 0.40 -0.7 4,269,645 - OH686_20880 0.40 -0.5 4,269,645 - OH686_20880 0.40 -2.8 4,269,645 - OH686_20880 0.40 -0.2 4,269,645 - OH686_20880 0.40 -1.7 4,269,645 - OH686_20880 0.40 -0.1 4,269,645 - OH686_20880 0.40 -0.8 4,269,645 - OH686_20880 0.40 +0.0 4,269,645 - OH686_20880 0.40 -0.1 4,269,645 - OH686_20880 0.40 -0.2 4,269,645 - OH686_20880 0.40 +0.3 4,271,692 + +0.6
Or see this region's nucleotide sequence