Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_00130 and OH686_00135 are separated by 86 nucleotides OH686_00135 and OH686_00140 overlap by 4 nucleotides OH686_00140 and OH686_00145 are separated by 4 nucleotides
OH686_00130: OH686_00130 - NADH dehydrogenase (quinone), G subunit, at 25,394 to 28,102
_00130
OH686_00135: OH686_00135 - NADH oxidoreductase (quinone), F subunit, at 28,189 to 29,547
_00135
OH686_00140: OH686_00140 - NADH-ubiquinone oxidoreductase chain E , at 29,544 to 30,044
_00140
OH686_00145: OH686_00145 - NADH-ubiquinone oxidoreductase chain C / NADH-ubiquinone oxidoreductase chain D , at 30,049 to 31,830
_00145
Position (kb) 28
29
30 Strain fitness (log2 ratio) -2
-1
0
1
2 at 27.288 kb on + strand, within OH686_00130 at 27.324 kb on + strand, within OH686_00130 at 27.325 kb on - strand, within OH686_00130 at 27.459 kb on + strand, within OH686_00130 at 27.460 kb on - strand, within OH686_00130 at 27.565 kb on - strand, within OH686_00130 at 27.565 kb on - strand, within OH686_00130 at 27.565 kb on - strand, within OH686_00130 at 27.621 kb on + strand, within OH686_00130 at 27.621 kb on + strand, within OH686_00130 at 27.621 kb on + strand, within OH686_00130 at 27.622 kb on - strand, within OH686_00130 at 27.622 kb on - strand, within OH686_00130 at 27.622 kb on - strand, within OH686_00130 at 27.622 kb on - strand, within OH686_00130 at 27.622 kb on - strand, within OH686_00130 at 27.624 kb on + strand, within OH686_00130 at 27.945 kb on + strand at 27.946 kb on - strand at 27.946 kb on - strand at 28.008 kb on + strand at 28.009 kb on - strand at 28.009 kb on - strand at 28.085 kb on + strand at 28.086 kb on - strand at 28.240 kb on + strand at 28.268 kb on + strand at 28.268 kb on + strand at 28.269 kb on - strand at 28.389 kb on + strand, within OH686_00135 at 28.389 kb on + strand, within OH686_00135 at 28.389 kb on + strand, within OH686_00135 at 28.389 kb on + strand, within OH686_00135 at 28.389 kb on + strand, within OH686_00135 at 28.655 kb on + strand, within OH686_00135 at 28.656 kb on - strand, within OH686_00135 at 28.656 kb on - strand, within OH686_00135 at 28.656 kb on - strand, within OH686_00135 at 28.679 kb on + strand, within OH686_00135 at 28.680 kb on - strand, within OH686_00135 at 28.808 kb on + strand, within OH686_00135 at 28.808 kb on + strand, within OH686_00135 at 28.809 kb on - strand, within OH686_00135 at 28.849 kb on + strand, within OH686_00135 at 28.849 kb on + strand, within OH686_00135 at 28.850 kb on - strand, within OH686_00135 at 28.980 kb on + strand, within OH686_00135 at 28.980 kb on + strand, within OH686_00135 at 28.980 kb on + strand, within OH686_00135 at 28.982 kb on + strand, within OH686_00135 at 28.982 kb on + strand, within OH686_00135 at 28.982 kb on + strand, within OH686_00135 at 28.982 kb on + strand, within OH686_00135 at 28.983 kb on - strand, within OH686_00135 at 29.108 kb on + strand, within OH686_00135 at 29.108 kb on + strand, within OH686_00135 at 29.109 kb on - strand, within OH686_00135 at 29.123 kb on + strand, within OH686_00135 at 29.127 kb on + strand, within OH686_00135 at 29.127 kb on + strand, within OH686_00135 at 29.127 kb on + strand, within OH686_00135 at 29.128 kb on - strand, within OH686_00135 at 29.128 kb on - strand, within OH686_00135 at 29.551 kb on + strand at 29.552 kb on - strand at 29.552 kb on - strand at 29.596 kb on + strand, within OH686_00140 at 29.818 kb on + strand, within OH686_00140 at 29.818 kb on + strand, within OH686_00140 at 29.818 kb on + strand, within OH686_00140 at 29.818 kb on + strand, within OH686_00140 at 29.818 kb on + strand, within OH686_00140 at 29.818 kb on + strand, within OH686_00140 at 29.819 kb on - strand, within OH686_00140 at 29.819 kb on - strand, within OH686_00140 at 29.819 kb on - strand, within OH686_00140 at 29.878 kb on + strand, within OH686_00140 at 29.878 kb on + strand, within OH686_00140 at 29.878 kb on + strand, within OH686_00140 at 29.878 kb on + strand, within OH686_00140 at 29.879 kb on - strand, within OH686_00140 at 29.879 kb on - strand, within OH686_00140 at 29.959 kb on + strand, within OH686_00140 at 29.959 kb on + strand, within OH686_00140 at 29.960 kb on - strand, within OH686_00140 at 29.960 kb on - strand, within OH686_00140 at 30.069 kb on + strand at 30.092 kb on + strand at 30.092 kb on + strand at 30.093 kb on - strand at 30.183 kb on - strand at 30.183 kb on - strand at 30.212 kb on + strand at 30.213 kb on - strand at 30.213 kb on - strand at 30.215 kb on + strand at 30.215 kb on + strand at 30.215 kb on + strand at 30.215 kb on + strand at 30.215 kb on + strand at 30.216 kb on - strand at 30.216 kb on - strand at 30.216 kb on - strand at 30.374 kb on + strand, within OH686_00145 at 30.374 kb on + strand, within OH686_00145 at 30.374 kb on + strand, within OH686_00145 at 30.375 kb on - strand, within OH686_00145 at 30.375 kb on - strand, within OH686_00145 at 30.461 kb on + strand, within OH686_00145 at 30.510 kb on - strand, within OH686_00145
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 27,288 + OH686_00130 0.70 -1.4 27,324 + OH686_00130 0.71 -1.2 27,325 - OH686_00130 0.71 -0.8 27,459 + OH686_00130 0.76 +2.1 27,460 - OH686_00130 0.76 -1.0 27,565 - OH686_00130 0.80 -0.9 27,565 - OH686_00130 0.80 -0.2 27,565 - OH686_00130 0.80 -0.2 27,621 + OH686_00130 0.82 -0.2 27,621 + OH686_00130 0.82 +0.5 27,621 + OH686_00130 0.82 -1.0 27,622 - OH686_00130 0.82 -1.4 27,622 - OH686_00130 0.82 -0.5 27,622 - OH686_00130 0.82 -0.8 27,622 - OH686_00130 0.82 -0.2 27,622 - OH686_00130 0.82 -0.8 27,624 + OH686_00130 0.82 +0.1 27,945 + +0.6 27,946 - -0.5 27,946 - -1.2 28,008 + -0.2 28,009 - -1.6 28,009 - -2.0 28,085 + -0.5 28,086 - -0.5 28,240 + -0.5 28,268 + +0.5 28,268 + -0.2 28,269 - -0.8 28,389 + OH686_00135 0.15 -0.2 28,389 + OH686_00135 0.15 -0.2 28,389 + OH686_00135 0.15 -1.5 28,389 + OH686_00135 0.15 +0.2 28,389 + OH686_00135 0.15 -1.5 28,655 + OH686_00135 0.34 -0.8 28,656 - OH686_00135 0.34 -0.1 28,656 - OH686_00135 0.34 -1.8 28,656 - OH686_00135 0.34 -1.4 28,679 + OH686_00135 0.36 -1.0 28,680 - OH686_00135 0.36 +0.5 28,808 + OH686_00135 0.46 -1.4 28,808 + OH686_00135 0.46 -2.4 28,809 - OH686_00135 0.46 -0.2 28,849 + OH686_00135 0.49 -1.0 28,849 + OH686_00135 0.49 -0.5 28,850 - OH686_00135 0.49 -0.2 28,980 + OH686_00135 0.58 -1.5 28,980 + OH686_00135 0.58 -0.8 28,980 + OH686_00135 0.58 -1.0 28,982 + OH686_00135 0.58 -0.8 28,982 + OH686_00135 0.58 -0.2 28,982 + OH686_00135 0.58 -0.5 28,982 + OH686_00135 0.58 -0.8 28,983 - OH686_00135 0.58 -0.2 29,108 + OH686_00135 0.68 -0.8 29,108 + OH686_00135 0.68 -0.2 29,109 - OH686_00135 0.68 -1.6 29,123 + OH686_00135 0.69 -0.5 29,127 + OH686_00135 0.69 -2.2 29,127 + OH686_00135 0.69 -0.5 29,127 + OH686_00135 0.69 -1.6 29,128 - OH686_00135 0.69 -0.8 29,128 - OH686_00135 0.69 -0.2 29,551 + -0.6 29,552 - -1.0 29,552 - +0.4 29,596 + OH686_00140 0.10 -0.8 29,818 + OH686_00140 0.55 -2.0 29,818 + OH686_00140 0.55 -1.0 29,818 + OH686_00140 0.55 -0.2 29,818 + OH686_00140 0.55 -2.1 29,818 + OH686_00140 0.55 -1.8 29,818 + OH686_00140 0.55 -0.5 29,819 - OH686_00140 0.55 -1.0 29,819 - OH686_00140 0.55 -1.2 29,819 - OH686_00140 0.55 -1.1 29,878 + OH686_00140 0.67 +1.6 29,878 + OH686_00140 0.67 -0.8 29,878 + OH686_00140 0.67 -0.2 29,878 + OH686_00140 0.67 -0.8 29,879 - OH686_00140 0.67 -1.4 29,879 - OH686_00140 0.67 -0.2 29,959 + OH686_00140 0.83 -0.2 29,959 + OH686_00140 0.83 -1.4 29,960 - OH686_00140 0.83 -2.3 29,960 - OH686_00140 0.83 -1.0 30,069 + -0.5 30,092 + -0.5 30,092 + -1.0 30,093 - +0.0 30,183 - -0.2 30,183 - -1.0 30,212 + -0.8 30,213 - -0.5 30,213 - +0.5 30,215 + -0.8 30,215 + -0.2 30,215 + -0.5 30,215 + -0.2 30,215 + -0.5 30,216 - -0.2 30,216 - -1.2 30,216 - -1.2 30,374 + OH686_00145 0.18 -0.5 30,374 + OH686_00145 0.18 -0.5 30,374 + OH686_00145 0.18 +0.6 30,375 - OH686_00145 0.18 -0.2 30,375 - OH686_00145 0.18 -2.2 30,461 + OH686_00145 0.23 -0.5 30,510 - OH686_00145 0.26 -0.4
Or see this region's nucleotide sequence