Experiment: m.b. Nickel (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19830 and CA264_19835 are separated by 2 nucleotides CA264_19835 and CA264_19840 are separated by 18 nucleotides CA264_19840 and CA264_19845 are separated by 55 nucleotides
CA264_19830: CA264_19830 - hypothetical protein, at 4,575,837 to 4,577,285
_19830
CA264_19835: CA264_19835 - chorismate synthase, at 4,577,288 to 4,578,367
_19835
CA264_19840: CA264_19840 - hypothetical protein, at 4,578,386 to 4,578,619
_19840
CA264_19845: CA264_19845 - hypothetical protein, at 4,578,675 to 4,579,271
_19845
Position (kb)
4577
4578
4579 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4576.303 kb on + strand, within CA264_19830 at 4576.304 kb on - strand, within CA264_19830 at 4576.392 kb on + strand, within CA264_19830 at 4576.393 kb on - strand, within CA264_19830 at 4576.567 kb on - strand, within CA264_19830 at 4576.567 kb on - strand, within CA264_19830 at 4576.639 kb on - strand, within CA264_19830 at 4576.639 kb on - strand, within CA264_19830 at 4576.641 kb on - strand, within CA264_19830 at 4576.701 kb on + strand, within CA264_19830 at 4576.829 kb on + strand, within CA264_19830 at 4576.829 kb on + strand, within CA264_19830 at 4576.829 kb on + strand, within CA264_19830 at 4576.830 kb on - strand, within CA264_19830 at 4576.830 kb on - strand, within CA264_19830 at 4576.833 kb on + strand, within CA264_19830 at 4577.043 kb on + strand, within CA264_19830 at 4577.043 kb on + strand, within CA264_19830 at 4577.048 kb on + strand, within CA264_19830 at 4577.067 kb on + strand, within CA264_19830 at 4577.158 kb on - strand at 4577.158 kb on - strand at 4577.284 kb on - strand at 4577.287 kb on + strand at 4578.354 kb on + strand at 4578.355 kb on - strand at 4578.365 kb on + strand at 4578.366 kb on - strand at 4578.391 kb on + strand at 4578.392 kb on - strand at 4578.392 kb on - strand at 4578.439 kb on - strand, within CA264_19840 at 4578.542 kb on - strand, within CA264_19840 at 4578.601 kb on + strand at 4578.657 kb on + strand at 4578.658 kb on - strand at 4578.677 kb on - strand at 4578.677 kb on - strand at 4578.707 kb on + strand at 4578.707 kb on + strand at 4578.812 kb on - strand, within CA264_19845 at 4578.842 kb on + strand, within CA264_19845 at 4578.842 kb on + strand, within CA264_19845 at 4578.843 kb on - strand, within CA264_19845 at 4578.873 kb on - strand, within CA264_19845 at 4578.878 kb on + strand, within CA264_19845 at 4578.879 kb on - strand, within CA264_19845 at 4578.915 kb on + strand, within CA264_19845 at 4578.915 kb on + strand, within CA264_19845 at 4578.915 kb on + strand, within CA264_19845 at 4578.916 kb on - strand, within CA264_19845 at 4578.916 kb on - strand, within CA264_19845 at 4578.965 kb on + strand, within CA264_19845 at 4578.966 kb on - strand, within CA264_19845 at 4578.970 kb on + strand, within CA264_19845 at 4578.970 kb on + strand, within CA264_19845 at 4578.971 kb on - strand, within CA264_19845 at 4578.984 kb on + strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.985 kb on - strand, within CA264_19845 at 4578.986 kb on + strand, within CA264_19845 at 4579.006 kb on + strand, within CA264_19845 at 4579.007 kb on - strand, within CA264_19845 at 4579.023 kb on + strand, within CA264_19845 at 4579.024 kb on - strand, within CA264_19845 at 4579.024 kb on - strand, within CA264_19845 at 4579.024 kb on - strand, within CA264_19845 at 4579.113 kb on + strand, within CA264_19845 at 4579.113 kb on + strand, within CA264_19845 at 4579.117 kb on + strand, within CA264_19845 at 4579.117 kb on + strand, within CA264_19845 at 4579.117 kb on + strand, within CA264_19845 at 4579.118 kb on - strand, within CA264_19845 at 4579.118 kb on - strand, within CA264_19845 at 4579.118 kb on - strand, within CA264_19845 at 4579.118 kb on - strand, within CA264_19845 at 4579.208 kb on + strand, within CA264_19845 at 4579.208 kb on + strand, within CA264_19845 at 4579.208 kb on + strand, within CA264_19845 at 4579.209 kb on - strand, within CA264_19845 at 4579.283 kb on - strand at 4579.302 kb on - strand at 4579.304 kb on - strand at 4579.306 kb on - strand at 4579.306 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 2 mM remove 4,576,303 + CA264_19830 0.32 +0.8 4,576,304 - CA264_19830 0.32 -0.3 4,576,392 + CA264_19830 0.38 +0.4 4,576,393 - CA264_19830 0.38 -1.0 4,576,567 - CA264_19830 0.50 -0.2 4,576,567 - CA264_19830 0.50 -1.3 4,576,639 - CA264_19830 0.55 -1.6 4,576,639 - CA264_19830 0.55 -0.7 4,576,641 - CA264_19830 0.55 +0.1 4,576,701 + CA264_19830 0.60 +0.7 4,576,829 + CA264_19830 0.68 -1.8 4,576,829 + CA264_19830 0.68 -1.6 4,576,829 + CA264_19830 0.68 -1.7 4,576,830 - CA264_19830 0.69 +1.4 4,576,830 - CA264_19830 0.69 +0.2 4,576,833 + CA264_19830 0.69 -0.4 4,577,043 + CA264_19830 0.83 -0.6 4,577,043 + CA264_19830 0.83 -0.7 4,577,048 + CA264_19830 0.84 -2.2 4,577,067 + CA264_19830 0.85 -1.1 4,577,158 - -0.6 4,577,158 - -0.7 4,577,284 - -1.0 4,577,287 + -0.9 4,578,354 + -0.9 4,578,355 - +1.0 4,578,365 + -1.3 4,578,366 - -0.6 4,578,391 + +1.3 4,578,392 - -0.5 4,578,392 - -0.2 4,578,439 - CA264_19840 0.23 +0.0 4,578,542 - CA264_19840 0.67 +0.2 4,578,601 + -0.4 4,578,657 + -0.0 4,578,658 - -0.1 4,578,677 - +1.6 4,578,677 - -0.2 4,578,707 + +0.6 4,578,707 + -2.1 4,578,812 - CA264_19845 0.23 -0.1 4,578,842 + CA264_19845 0.28 -1.5 4,578,842 + CA264_19845 0.28 -0.8 4,578,843 - CA264_19845 0.28 -0.6 4,578,873 - CA264_19845 0.33 +0.7 4,578,878 + CA264_19845 0.34 +0.8 4,578,879 - CA264_19845 0.34 -0.4 4,578,915 + CA264_19845 0.40 -1.4 4,578,915 + CA264_19845 0.40 -0.3 4,578,915 + CA264_19845 0.40 -1.9 4,578,916 - CA264_19845 0.40 -0.4 4,578,916 - CA264_19845 0.40 -1.9 4,578,965 + CA264_19845 0.49 -0.9 4,578,966 - CA264_19845 0.49 -0.2 4,578,970 + CA264_19845 0.49 +0.3 4,578,970 + CA264_19845 0.49 -0.0 4,578,971 - CA264_19845 0.50 -0.1 4,578,984 + CA264_19845 0.52 -0.1 4,578,985 - CA264_19845 0.52 +0.0 4,578,985 - CA264_19845 0.52 -0.4 4,578,985 - CA264_19845 0.52 -0.3 4,578,985 - CA264_19845 0.52 +0.3 4,578,985 - CA264_19845 0.52 +1.3 4,578,985 - CA264_19845 0.52 -1.8 4,578,985 - CA264_19845 0.52 +0.3 4,578,985 - CA264_19845 0.52 +0.3 4,578,985 - CA264_19845 0.52 -0.2 4,578,985 - CA264_19845 0.52 +1.0 4,578,985 - CA264_19845 0.52 -0.8 4,578,986 + CA264_19845 0.52 -3.0 4,579,006 + CA264_19845 0.55 -1.0 4,579,007 - CA264_19845 0.56 +1.6 4,579,023 + CA264_19845 0.58 -2.5 4,579,024 - CA264_19845 0.58 -0.7 4,579,024 - CA264_19845 0.58 -0.0 4,579,024 - CA264_19845 0.58 +0.2 4,579,113 + CA264_19845 0.73 +0.6 4,579,113 + CA264_19845 0.73 +0.7 4,579,117 + CA264_19845 0.74 -0.2 4,579,117 + CA264_19845 0.74 -1.0 4,579,117 + CA264_19845 0.74 -1.4 4,579,118 - CA264_19845 0.74 -0.3 4,579,118 - CA264_19845 0.74 +1.3 4,579,118 - CA264_19845 0.74 +0.1 4,579,118 - CA264_19845 0.74 -0.3 4,579,208 + CA264_19845 0.89 +1.0 4,579,208 + CA264_19845 0.89 -1.0 4,579,208 + CA264_19845 0.89 -1.1 4,579,209 - CA264_19845 0.89 -0.9 4,579,283 - -0.4 4,579,302 - -0.6 4,579,304 - -0.6 4,579,306 - -0.4 4,579,306 - +0.3
Or see this region's nucleotide sequence