Experiment: m.b. Nickel (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17860 and CA264_17865 are separated by 53 nucleotides CA264_17865 and CA264_17870 are separated by 96 nucleotides CA264_17870 and CA264_17875 are separated by 105 nucleotides
CA264_17860: CA264_17860 - tRNA dihydrouridine synthase DusB, at 4,153,205 to 4,154,194
_17860
CA264_17865: CA264_17865 - CPBP family intramembrane metalloprotease domain-containing protein, at 4,154,248 to 4,155,213
_17865
CA264_17870: CA264_17870 - phosphatidate cytidylyltransferase, at 4,155,310 to 4,156,095
_17870
CA264_17875: CA264_17875 - amino acid dehydrogenase, at 4,156,201 to 4,157,475
_17875
Position (kb)
4154
4155
4156 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4153.335 kb on + strand, within CA264_17860 at 4153.409 kb on + strand, within CA264_17860 at 4153.445 kb on + strand, within CA264_17860 at 4153.465 kb on - strand, within CA264_17860 at 4153.465 kb on - strand, within CA264_17860 at 4153.465 kb on - strand, within CA264_17860 at 4153.484 kb on + strand, within CA264_17860 at 4153.537 kb on - strand, within CA264_17860 at 4153.574 kb on + strand, within CA264_17860 at 4153.659 kb on + strand, within CA264_17860 at 4153.660 kb on - strand, within CA264_17860 at 4153.686 kb on - strand, within CA264_17860 at 4153.741 kb on - strand, within CA264_17860 at 4153.802 kb on + strand, within CA264_17860 at 4153.897 kb on - strand, within CA264_17860 at 4154.065 kb on + strand, within CA264_17860 at 4154.082 kb on - strand, within CA264_17860 at 4154.082 kb on - strand, within CA264_17860 at 4154.129 kb on + strand at 4154.129 kb on + strand at 4154.169 kb on - strand at 4154.169 kb on - strand at 4154.174 kb on + strand at 4154.174 kb on + strand at 4154.179 kb on + strand at 4154.190 kb on - strand at 4154.232 kb on - strand at 4155.211 kb on + strand at 4155.212 kb on - strand at 4155.223 kb on - strand at 4155.233 kb on + strand at 4155.233 kb on + strand at 4155.233 kb on + strand at 4155.233 kb on + strand at 4155.236 kb on - strand at 4156.125 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 2 mM remove 4,153,335 + CA264_17860 0.13 +0.9 4,153,409 + CA264_17860 0.21 -0.8 4,153,445 + CA264_17860 0.24 -0.6 4,153,465 - CA264_17860 0.26 -0.8 4,153,465 - CA264_17860 0.26 +0.0 4,153,465 - CA264_17860 0.26 -0.1 4,153,484 + CA264_17860 0.28 +0.2 4,153,537 - CA264_17860 0.34 -1.0 4,153,574 + CA264_17860 0.37 -0.1 4,153,659 + CA264_17860 0.46 -0.1 4,153,660 - CA264_17860 0.46 +3.7 4,153,686 - CA264_17860 0.49 +0.2 4,153,741 - CA264_17860 0.54 +0.4 4,153,802 + CA264_17860 0.60 +0.4 4,153,897 - CA264_17860 0.70 -1.1 4,154,065 + CA264_17860 0.87 -0.2 4,154,082 - CA264_17860 0.89 -0.1 4,154,082 - CA264_17860 0.89 -0.0 4,154,129 + -0.4 4,154,129 + -0.8 4,154,169 - -0.6 4,154,169 - -0.1 4,154,174 + -0.7 4,154,174 + -0.5 4,154,179 + -1.2 4,154,190 - -0.6 4,154,232 - -0.8 4,155,211 + -2.0 4,155,212 - -1.7 4,155,223 - +0.1 4,155,233 + -1.4 4,155,233 + -1.2 4,155,233 + -1.2 4,155,233 + +1.1 4,155,236 - -1.9 4,156,125 + +0.8
Or see this region's nucleotide sequence