Experiment: m.b. Nickel (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14420 and CA264_14425 are separated by 255 nucleotides CA264_14425 and CA264_14430 are separated by 154 nucleotides
CA264_14420: CA264_14420 - hypothetical protein, at 3,383,323 to 3,384,033
_14420
CA264_14425: CA264_14425 - acetyl-CoA carboxylase carboxyl transferase subunit beta, at 3,384,289 to 3,385,185
_14425
CA264_14430: CA264_14430 - fructose-bisphosphate aldolase, at 3,385,340 to 3,386,398
_14430
Position (kb)
3384
3385
3386 Strain fitness (log2 ratio)
-2
-1
0
1 at 3383.308 kb on + strand at 3383.309 kb on - strand at 3383.309 kb on - strand at 3383.444 kb on + strand, within CA264_14420 at 3383.448 kb on + strand, within CA264_14420 at 3383.448 kb on + strand, within CA264_14420 at 3383.448 kb on + strand, within CA264_14420 at 3383.448 kb on + strand, within CA264_14420 at 3383.499 kb on - strand, within CA264_14420 at 3383.549 kb on + strand, within CA264_14420 at 3383.592 kb on + strand, within CA264_14420 at 3383.683 kb on - strand, within CA264_14420 at 3383.970 kb on + strand at 3384.033 kb on + strand at 3384.034 kb on - strand at 3384.066 kb on + strand at 3384.080 kb on - strand at 3384.131 kb on + strand at 3384.200 kb on - strand at 3384.200 kb on - strand at 3384.231 kb on + strand at 3384.334 kb on - strand at 3384.334 kb on - strand at 3385.220 kb on + strand at 3385.255 kb on + strand at 3385.255 kb on + strand at 3385.256 kb on - strand at 3385.289 kb on + strand at 3385.312 kb on - strand at 3385.315 kb on + strand at 3385.316 kb on - strand at 3385.334 kb on + strand at 3385.351 kb on + strand at 3385.352 kb on - strand at 3385.352 kb on - strand at 3385.370 kb on + strand at 3385.370 kb on + strand at 3385.371 kb on - strand at 3385.371 kb on - strand at 3385.371 kb on - strand at 3385.554 kb on + strand, within CA264_14430 at 3385.555 kb on - strand, within CA264_14430 at 3385.701 kb on - strand, within CA264_14430 at 3385.701 kb on - strand, within CA264_14430 at 3385.791 kb on + strand, within CA264_14430 at 3385.791 kb on + strand, within CA264_14430 at 3385.791 kb on + strand, within CA264_14430 at 3385.792 kb on - strand, within CA264_14430 at 3385.792 kb on - strand, within CA264_14430 at 3385.813 kb on + strand, within CA264_14430 at 3385.817 kb on + strand, within CA264_14430 at 3385.817 kb on + strand, within CA264_14430 at 3385.867 kb on + strand, within CA264_14430 at 3385.887 kb on + strand, within CA264_14430 at 3385.887 kb on + strand, within CA264_14430 at 3385.887 kb on + strand, within CA264_14430 at 3385.888 kb on - strand, within CA264_14430 at 3385.888 kb on - strand, within CA264_14430 at 3385.890 kb on - strand, within CA264_14430 at 3385.890 kb on - strand, within CA264_14430 at 3386.025 kb on + strand, within CA264_14430 at 3386.025 kb on + strand, within CA264_14430 at 3386.026 kb on - strand, within CA264_14430 at 3386.026 kb on - strand, within CA264_14430 at 3386.059 kb on + strand, within CA264_14430 at 3386.063 kb on - strand, within CA264_14430 at 3386.099 kb on - strand, within CA264_14430 at 3386.099 kb on - strand, within CA264_14430 at 3386.156 kb on - strand, within CA264_14430
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 2 mM remove 3,383,308 + -0.7 3,383,309 - +0.6 3,383,309 - -1.0 3,383,444 + CA264_14420 0.17 -0.5 3,383,448 + CA264_14420 0.18 -0.9 3,383,448 + CA264_14420 0.18 -1.0 3,383,448 + CA264_14420 0.18 -2.7 3,383,448 + CA264_14420 0.18 -1.9 3,383,499 - CA264_14420 0.25 -0.5 3,383,549 + CA264_14420 0.32 -1.4 3,383,592 + CA264_14420 0.38 -2.4 3,383,683 - CA264_14420 0.51 +0.4 3,383,970 + -0.7 3,384,033 + -1.9 3,384,034 - +0.2 3,384,066 + -1.6 3,384,080 - -0.1 3,384,131 + -0.2 3,384,200 - +0.0 3,384,200 - -0.5 3,384,231 + +0.3 3,384,334 - -0.1 3,384,334 - -0.3 3,385,220 + -0.2 3,385,255 + -1.3 3,385,255 + +0.3 3,385,256 - +0.1 3,385,289 + +0.3 3,385,312 - +0.0 3,385,315 + -0.3 3,385,316 - +0.3 3,385,334 + +0.1 3,385,351 + -0.1 3,385,352 - -0.3 3,385,352 - +0.5 3,385,370 + -0.2 3,385,370 + -0.2 3,385,371 - -0.7 3,385,371 - -0.9 3,385,371 - -0.8 3,385,554 + CA264_14430 0.20 +0.1 3,385,555 - CA264_14430 0.20 +0.2 3,385,701 - CA264_14430 0.34 +1.2 3,385,701 - CA264_14430 0.34 -0.1 3,385,791 + CA264_14430 0.43 -0.1 3,385,791 + CA264_14430 0.43 +0.4 3,385,791 + CA264_14430 0.43 +0.0 3,385,792 - CA264_14430 0.43 -0.1 3,385,792 - CA264_14430 0.43 -0.8 3,385,813 + CA264_14430 0.45 -0.7 3,385,817 + CA264_14430 0.45 -0.7 3,385,817 + CA264_14430 0.45 +0.3 3,385,867 + CA264_14430 0.50 +0.2 3,385,887 + CA264_14430 0.52 -0.1 3,385,887 + CA264_14430 0.52 -0.6 3,385,887 + CA264_14430 0.52 -1.4 3,385,888 - CA264_14430 0.52 +0.3 3,385,888 - CA264_14430 0.52 -2.1 3,385,890 - CA264_14430 0.52 -1.8 3,385,890 - CA264_14430 0.52 -0.6 3,386,025 + CA264_14430 0.65 +0.4 3,386,025 + CA264_14430 0.65 +0.5 3,386,026 - CA264_14430 0.65 -0.8 3,386,026 - CA264_14430 0.65 -0.4 3,386,059 + CA264_14430 0.68 -1.1 3,386,063 - CA264_14430 0.68 -0.7 3,386,099 - CA264_14430 0.72 +0.4 3,386,099 - CA264_14430 0.72 +0.1 3,386,156 - CA264_14430 0.77 -0.3
Or see this region's nucleotide sequence