Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_11580

Experiment: m.b. Nickel (II) chloride 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nt CA264_11580: CA264_11580 - hypothetical protein, at 2,695,385 to 2,696,212 _11580 Position (kb) 2695 2696 2697Strain fitness (log2 ratio) -2 -1 0 1 2at 2694.389 kb on - strandat 2694.389 kb on - strandat 2694.394 kb on - strandat 2694.474 kb on + strandat 2694.475 kb on - strandat 2694.475 kb on - strandat 2694.478 kb on + strandat 2694.479 kb on - strandat 2694.479 kb on - strandat 2694.482 kb on + strandat 2694.482 kb on + strandat 2694.483 kb on - strandat 2694.483 kb on - strandat 2694.532 kb on + strandat 2694.533 kb on - strandat 2694.533 kb on - strandat 2694.549 kb on - strandat 2694.572 kb on + strandat 2694.572 kb on + strandat 2694.600 kb on + strandat 2694.601 kb on - strandat 2694.601 kb on - strandat 2694.620 kb on + strandat 2694.626 kb on - strandat 2694.639 kb on + strandat 2694.642 kb on + strandat 2694.643 kb on - strandat 2694.644 kb on + strandat 2694.706 kb on + strandat 2694.737 kb on - strandat 2694.801 kb on - strandat 2694.858 kb on - strandat 2694.862 kb on + strandat 2694.863 kb on - strandat 2694.905 kb on + strandat 2694.941 kb on - strandat 2694.942 kb on + strandat 2694.959 kb on - strandat 2694.968 kb on + strandat 2694.968 kb on + strandat 2695.110 kb on - strandat 2695.110 kb on - strandat 2695.113 kb on + strandat 2695.114 kb on - strandat 2695.114 kb on - strandat 2695.128 kb on + strandat 2695.132 kb on + strandat 2695.166 kb on + strandat 2695.167 kb on - strandat 2695.249 kb on + strandat 2695.249 kb on + strandat 2695.350 kb on + strandat 2695.387 kb on - strandat 2695.387 kb on - strandat 2695.444 kb on - strandat 2695.444 kb on - strandat 2695.444 kb on - strandat 2695.444 kb on - strandat 2695.446 kb on + strandat 2695.516 kb on - strand, within CA264_11580at 2695.525 kb on - strand, within CA264_11580at 2695.645 kb on + strand, within CA264_11580at 2695.645 kb on + strand, within CA264_11580at 2695.646 kb on - strand, within CA264_11580at 2695.646 kb on - strand, within CA264_11580at 2695.646 kb on - strand, within CA264_11580at 2695.649 kb on - strand, within CA264_11580at 2695.649 kb on - strand, within CA264_11580at 2695.749 kb on - strand, within CA264_11580at 2695.791 kb on - strand, within CA264_11580at 2695.849 kb on + strand, within CA264_11580at 2695.849 kb on + strand, within CA264_11580at 2695.850 kb on - strand, within CA264_11580at 2695.850 kb on - strand, within CA264_11580at 2695.852 kb on + strand, within CA264_11580at 2695.860 kb on + strand, within CA264_11580at 2695.861 kb on - strand, within CA264_11580at 2695.861 kb on - strand, within CA264_11580at 2695.864 kb on + strand, within CA264_11580at 2695.887 kb on - strand, within CA264_11580at 2695.913 kb on + strand, within CA264_11580at 2695.914 kb on - strand, within CA264_11580at 2695.943 kb on - strand, within CA264_11580at 2695.968 kb on - strand, within CA264_11580at 2695.970 kb on - strand, within CA264_11580at 2695.970 kb on - strand, within CA264_11580at 2696.008 kb on + strand, within CA264_11580at 2696.009 kb on - strand, within CA264_11580at 2696.010 kb on + strand, within CA264_11580at 2696.010 kb on + strand, within CA264_11580at 2696.011 kb on - strand, within CA264_11580at 2696.011 kb on - strand, within CA264_11580at 2696.120 kb on + strand, within CA264_11580at 2696.121 kb on - strand, within CA264_11580at 2696.121 kb on - strand, within CA264_11580at 2696.121 kb on - strand, within CA264_11580at 2696.189 kb on + strandat 2696.190 kb on - strandat 2696.190 kb on - strandat 2696.190 kb on - strandat 2696.193 kb on + strandat 2696.194 kb on - strandat 2696.221 kb on - strandat 2696.221 kb on - strandat 2696.294 kb on + strandat 2696.303 kb on - strandat 2696.303 kb on - strandat 2696.336 kb on - strandat 2696.336 kb on - strandat 2696.346 kb on - strandat 2696.354 kb on + strandat 2696.374 kb on + strandat 2696.375 kb on - strandat 2696.388 kb on + strandat 2696.388 kb on + strandat 2696.389 kb on - strandat 2696.389 kb on - strandat 2696.389 kb on - strandat 2696.390 kb on + strandat 2696.420 kb on + strandat 2696.421 kb on - strandat 2696.421 kb on - strandat 2696.442 kb on - strandat 2696.442 kb on - strandat 2696.442 kb on - strandat 2696.443 kb on + strandat 2696.540 kb on - strandat 2696.540 kb on - strandat 2696.561 kb on + strandat 2696.562 kb on - strandat 2696.566 kb on + strandat 2696.567 kb on - strandat 2696.567 kb on - strandat 2696.699 kb on + strandat 2696.746 kb on + strandat 2696.746 kb on + strandat 2696.752 kb on - strandat 2696.812 kb on + strandat 2696.813 kb on - strandat 2696.822 kb on + strandat 2696.822 kb on + strandat 2696.823 kb on - strandat 2696.948 kb on + strandat 2696.967 kb on + strandat 2696.968 kb on - strandat 2696.984 kb on + strandat 2696.987 kb on + strandat 2696.992 kb on - strandat 2696.992 kb on - strandat 2697.045 kb on + strandat 2697.049 kb on + strandat 2697.049 kb on + strandat 2697.116 kb on + strandat 2697.117 kb on - strandat 2697.186 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 2 mM
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2,694,389 - +0.6
2,694,389 - -0.7
2,694,394 - -0.5
2,694,474 + -0.4
2,694,475 - -1.5
2,694,475 - -0.2
2,694,478 + -0.5
2,694,479 - -0.0
2,694,479 - -1.4
2,694,482 + -2.1
2,694,482 + -0.9
2,694,483 - -0.2
2,694,483 - -0.0
2,694,532 + -0.3
2,694,533 - +0.9
2,694,533 - +0.5
2,694,549 - -0.0
2,694,572 + +0.0
2,694,572 + +0.1
2,694,600 + -0.9
2,694,601 - +0.0
2,694,601 - -0.8
2,694,620 + -0.7
2,694,626 - -1.8
2,694,639 + -0.7
2,694,642 + -0.4
2,694,643 - -0.5
2,694,644 + -1.2
2,694,706 + +0.2
2,694,737 - +0.6
2,694,801 - -0.2
2,694,858 - +0.7
2,694,862 + -0.1
2,694,863 - +0.2
2,694,905 + -0.3
2,694,941 - +1.0
2,694,942 + -0.9
2,694,959 - -0.9
2,694,968 + +0.3
2,694,968 + +0.3
2,695,110 - -0.4
2,695,110 - -0.2
2,695,113 + -0.9
2,695,114 - -0.3
2,695,114 - -0.5
2,695,128 + -0.1
2,695,132 + -0.7
2,695,166 + -0.4
2,695,167 - +0.4
2,695,249 + -0.5
2,695,249 + +0.3
2,695,350 + -0.0
2,695,387 - +0.0
2,695,387 - -0.6
2,695,444 - -0.4
2,695,444 - -1.3
2,695,444 - -0.9
2,695,444 - +0.8
2,695,446 + -2.5
2,695,516 - CA264_11580 0.16 -0.5
2,695,525 - CA264_11580 0.17 -0.5
2,695,645 + CA264_11580 0.31 -1.5
2,695,645 + CA264_11580 0.31 -0.8
2,695,646 - CA264_11580 0.32 -0.6
2,695,646 - CA264_11580 0.32 -0.2
2,695,646 - CA264_11580 0.32 +0.1
2,695,649 - CA264_11580 0.32 -0.1
2,695,649 - CA264_11580 0.32 -2.2
2,695,749 - CA264_11580 0.44 +0.0
2,695,791 - CA264_11580 0.49 -0.6
2,695,849 + CA264_11580 0.56 +0.7
2,695,849 + CA264_11580 0.56 +1.8
2,695,850 - CA264_11580 0.56 -0.4
2,695,850 - CA264_11580 0.56 +0.1
2,695,852 + CA264_11580 0.56 +0.2
2,695,860 + CA264_11580 0.57 +0.3
2,695,861 - CA264_11580 0.57 -1.0
2,695,861 - CA264_11580 0.57 -1.0
2,695,864 + CA264_11580 0.58 -2.4
2,695,887 - CA264_11580 0.61 -0.2
2,695,913 + CA264_11580 0.64 -1.5
2,695,914 - CA264_11580 0.64 -1.2
2,695,943 - CA264_11580 0.67 +0.1
2,695,968 - CA264_11580 0.70 -1.7
2,695,970 - CA264_11580 0.71 -0.5
2,695,970 - CA264_11580 0.71 +0.2
2,696,008 + CA264_11580 0.75 +0.1
2,696,009 - CA264_11580 0.75 -0.5
2,696,010 + CA264_11580 0.75 -1.0
2,696,010 + CA264_11580 0.75 -0.4
2,696,011 - CA264_11580 0.76 -1.0
2,696,011 - CA264_11580 0.76 -0.7
2,696,120 + CA264_11580 0.89 -0.4
2,696,121 - CA264_11580 0.89 +0.9
2,696,121 - CA264_11580 0.89 -0.0
2,696,121 - CA264_11580 0.89 +0.0
2,696,189 + -0.7
2,696,190 - +1.0
2,696,190 - -0.7
2,696,190 - +0.1
2,696,193 + +0.5
2,696,194 - +1.2
2,696,221 - +0.7
2,696,221 - -1.5
2,696,294 + +0.5
2,696,303 - +1.3
2,696,303 - -0.6
2,696,336 - -0.7
2,696,336 - -0.2
2,696,346 - -0.2
2,696,354 + -0.1
2,696,374 + +0.2
2,696,375 - +1.1
2,696,388 + +1.2
2,696,388 + -1.0
2,696,389 - -0.8
2,696,389 - -1.3
2,696,389 - +0.2
2,696,390 + +0.5
2,696,420 + +1.3
2,696,421 - -0.7
2,696,421 - -0.1
2,696,442 - +0.6
2,696,442 - +1.1
2,696,442 - +0.0
2,696,443 + -0.2
2,696,540 - -0.7
2,696,540 - -0.4
2,696,561 + +0.1
2,696,562 - +0.1
2,696,566 + +0.3
2,696,567 - +0.5
2,696,567 - -1.1
2,696,699 + -0.4
2,696,746 + -0.0
2,696,746 + +2.3
2,696,752 - -1.6
2,696,812 + +0.1
2,696,813 - -1.7
2,696,822 + +1.2
2,696,822 + -0.4
2,696,823 - +1.4
2,696,948 + -0.2
2,696,967 + -0.8
2,696,968 - +0.2
2,696,984 + +0.1
2,696,987 + -0.2
2,696,992 - -0.1
2,696,992 - -0.5
2,697,045 + -0.7
2,697,049 + -0.7
2,697,049 + +0.3
2,697,116 + -0.7
2,697,117 - -0.0
2,697,186 + -0.7

Or see this region's nucleotide sequence