Experiment: m.b. Nickel (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09725 and CA264_09730 are separated by 62 nucleotides CA264_09730 and CA264_09735 are separated by 16 nucleotides CA264_09735 and CA264_09740 are separated by 611 nucleotides
CA264_09725: CA264_09725 - cAMP-binding protein, at 2,259,415 to 2,259,984
_09725
CA264_09730: CA264_09730 - hypothetical protein, at 2,260,047 to 2,260,592
_09730
CA264_09735: CA264_09735 - 5-hydroxyisourate hydrolase, at 2,260,609 to 2,261,016
_09735
CA264_09740: CA264_09740 - hypothetical protein, at 2,261,628 to 2,262,092
_09740
Position (kb)
2260
2261
2262 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2259.695 kb on - strand, within CA264_09725 at 2259.767 kb on + strand, within CA264_09725 at 2259.785 kb on + strand, within CA264_09725 at 2259.786 kb on - strand, within CA264_09725 at 2259.955 kb on - strand at 2259.955 kb on - strand at 2259.959 kb on + strand at 2259.959 kb on + strand at 2259.996 kb on + strand at 2260.027 kb on - strand at 2260.027 kb on - strand at 2260.083 kb on - strand at 2260.174 kb on + strand, within CA264_09730 at 2260.205 kb on - strand, within CA264_09730 at 2260.211 kb on - strand, within CA264_09730 at 2260.217 kb on + strand, within CA264_09730 at 2260.292 kb on + strand, within CA264_09730 at 2260.354 kb on - strand, within CA264_09730 at 2260.354 kb on - strand, within CA264_09730 at 2260.354 kb on - strand, within CA264_09730 at 2260.580 kb on - strand at 2260.580 kb on - strand at 2260.580 kb on - strand at 2260.584 kb on - strand at 2260.584 kb on - strand at 2260.584 kb on - strand at 2260.584 kb on - strand at 2260.584 kb on - strand at 2260.626 kb on - strand at 2260.626 kb on - strand at 2260.945 kb on - strand, within CA264_09735 at 2260.961 kb on - strand, within CA264_09735 at 2261.201 kb on + strand at 2261.336 kb on + strand at 2261.336 kb on + strand at 2261.436 kb on + strand at 2261.502 kb on - strand at 2261.514 kb on + strand at 2261.514 kb on + strand at 2261.534 kb on + strand at 2261.563 kb on - strand at 2261.669 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 2 mM remove 2,259,695 - CA264_09725 0.49 -1.6 2,259,767 + CA264_09725 0.62 -1.3 2,259,785 + CA264_09725 0.65 -1.2 2,259,786 - CA264_09725 0.65 -0.1 2,259,955 - -1.1 2,259,955 - -0.2 2,259,959 + -0.1 2,259,959 + -0.1 2,259,996 + -0.8 2,260,027 - -0.7 2,260,027 - +0.0 2,260,083 - +0.0 2,260,174 + CA264_09730 0.23 -0.1 2,260,205 - CA264_09730 0.29 +1.0 2,260,211 - CA264_09730 0.30 -1.1 2,260,217 + CA264_09730 0.31 -0.6 2,260,292 + CA264_09730 0.45 -0.3 2,260,354 - CA264_09730 0.56 +0.8 2,260,354 - CA264_09730 0.56 -0.2 2,260,354 - CA264_09730 0.56 +1.8 2,260,580 - +0.8 2,260,580 - +0.2 2,260,580 - -0.6 2,260,584 - -0.2 2,260,584 - +0.2 2,260,584 - +0.7 2,260,584 - -0.9 2,260,584 - -0.3 2,260,626 - +0.5 2,260,626 - -0.1 2,260,945 - CA264_09735 0.82 +0.2 2,260,961 - CA264_09735 0.86 -1.3 2,261,201 + -0.2 2,261,336 + -0.0 2,261,336 + -0.7 2,261,436 + -0.4 2,261,502 - -1.7 2,261,514 + -0.3 2,261,514 + -1.1 2,261,534 + -1.3 2,261,563 - -1.8 2,261,669 + -0.7
Or see this region's nucleotide sequence