Experiment: m.b. Nickel (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08985 and CA264_08990 overlap by 1 nucleotides CA264_08990 and CA264_08995 overlap by 4 nucleotides
CA264_08985: CA264_08985 - glycosyl transferase family 2, at 2,097,798 to 2,099,267
_08985
CA264_08990: CA264_08990 - FeS-binding protein, at 2,099,267 to 2,100,811
_08990
CA264_08995: CA264_08995 - FAD-dependent oxidoreductase, at 2,100,808 to 2,102,205
_08995
Position (kb)
2099
2100
2101 Strain fitness (log2 ratio)
-2
-1
0
1 at 2098.510 kb on + strand, within CA264_08985 at 2098.514 kb on + strand, within CA264_08985 at 2098.547 kb on + strand, within CA264_08985 at 2098.547 kb on + strand, within CA264_08985 at 2098.548 kb on - strand, within CA264_08985 at 2098.548 kb on - strand, within CA264_08985 at 2098.661 kb on + strand, within CA264_08985 at 2098.682 kb on - strand, within CA264_08985 at 2098.729 kb on + strand, within CA264_08985 at 2098.730 kb on - strand, within CA264_08985 at 2098.850 kb on + strand, within CA264_08985 at 2098.851 kb on - strand, within CA264_08985 at 2098.880 kb on - strand, within CA264_08985 at 2098.958 kb on + strand, within CA264_08985 at 2098.959 kb on - strand, within CA264_08985 at 2098.970 kb on + strand, within CA264_08985 at 2098.979 kb on + strand, within CA264_08985 at 2099.004 kb on + strand, within CA264_08985 at 2099.074 kb on + strand, within CA264_08985 at 2099.074 kb on + strand, within CA264_08985 at 2099.075 kb on - strand, within CA264_08985 at 2099.075 kb on - strand, within CA264_08985 at 2099.085 kb on - strand, within CA264_08985 at 2099.086 kb on + strand, within CA264_08985 at 2099.087 kb on - strand, within CA264_08985 at 2099.088 kb on + strand, within CA264_08985 at 2099.088 kb on + strand, within CA264_08985 at 2099.161 kb on + strand at 2099.177 kb on - strand at 2099.201 kb on + strand at 2099.202 kb on - strand at 2099.203 kb on + strand at 2099.204 kb on - strand at 2099.250 kb on + strand at 2099.250 kb on + strand at 2099.251 kb on - strand at 2099.251 kb on - strand at 2099.300 kb on - strand at 2099.303 kb on + strand at 2099.304 kb on - strand at 2099.312 kb on - strand at 2099.463 kb on + strand, within CA264_08990 at 2099.463 kb on + strand, within CA264_08990 at 2099.510 kb on - strand, within CA264_08990 at 2099.527 kb on + strand, within CA264_08990 at 2099.550 kb on + strand, within CA264_08990 at 2099.550 kb on + strand, within CA264_08990 at 2099.551 kb on - strand, within CA264_08990 at 2099.551 kb on - strand, within CA264_08990 at 2099.551 kb on - strand, within CA264_08990 at 2099.709 kb on + strand, within CA264_08990 at 2099.725 kb on + strand, within CA264_08990 at 2099.951 kb on - strand, within CA264_08990 at 2099.951 kb on - strand, within CA264_08990 at 2099.987 kb on - strand, within CA264_08990 at 2099.987 kb on - strand, within CA264_08990 at 2099.988 kb on + strand, within CA264_08990 at 2100.028 kb on + strand, within CA264_08990 at 2100.115 kb on + strand, within CA264_08990 at 2100.115 kb on + strand, within CA264_08990 at 2100.129 kb on + strand, within CA264_08990 at 2100.145 kb on - strand, within CA264_08990 at 2100.177 kb on - strand, within CA264_08990 at 2100.178 kb on + strand, within CA264_08990 at 2100.187 kb on + strand, within CA264_08990 at 2100.187 kb on + strand, within CA264_08990 at 2100.188 kb on - strand, within CA264_08990 at 2100.188 kb on - strand, within CA264_08990 at 2100.201 kb on + strand, within CA264_08990 at 2100.280 kb on - strand, within CA264_08990 at 2100.306 kb on + strand, within CA264_08990 at 2100.307 kb on - strand, within CA264_08990 at 2100.307 kb on - strand, within CA264_08990 at 2100.308 kb on + strand, within CA264_08990 at 2100.426 kb on + strand, within CA264_08990 at 2100.427 kb on - strand, within CA264_08990 at 2100.427 kb on - strand, within CA264_08990 at 2100.450 kb on - strand, within CA264_08990 at 2100.531 kb on + strand, within CA264_08990 at 2100.531 kb on + strand, within CA264_08990 at 2100.531 kb on + strand, within CA264_08990 at 2100.585 kb on + strand, within CA264_08990 at 2100.585 kb on + strand, within CA264_08990 at 2100.586 kb on - strand, within CA264_08990 at 2100.636 kb on + strand, within CA264_08990 at 2100.694 kb on + strand at 2100.694 kb on + strand at 2100.694 kb on + strand at 2100.694 kb on + strand at 2100.695 kb on - strand at 2100.695 kb on - strand at 2100.695 kb on - strand at 2100.780 kb on - strand at 2100.804 kb on - strand at 2100.830 kb on - strand at 2100.896 kb on + strand at 2100.896 kb on + strand at 2100.897 kb on - strand at 2100.897 kb on - strand at 2100.897 kb on - strand at 2100.897 kb on - strand at 2100.904 kb on + strand at 2100.930 kb on - strand at 2101.118 kb on + strand, within CA264_08995 at 2101.163 kb on + strand, within CA264_08995 at 2101.219 kb on - strand, within CA264_08995 at 2101.221 kb on - strand, within CA264_08995 at 2101.278 kb on + strand, within CA264_08995 at 2101.280 kb on + strand, within CA264_08995 at 2101.281 kb on - strand, within CA264_08995 at 2101.349 kb on + strand, within CA264_08995 at 2101.352 kb on - strand, within CA264_08995 at 2101.352 kb on - strand, within CA264_08995 at 2101.377 kb on - strand, within CA264_08995 at 2101.543 kb on + strand, within CA264_08995 at 2101.544 kb on - strand, within CA264_08995 at 2101.597 kb on + strand, within CA264_08995 at 2101.659 kb on + strand, within CA264_08995 at 2101.666 kb on + strand, within CA264_08995 at 2101.666 kb on + strand, within CA264_08995 at 2101.666 kb on + strand, within CA264_08995 at 2101.666 kb on + strand, within CA264_08995 at 2101.667 kb on - strand, within CA264_08995 at 2101.701 kb on + strand, within CA264_08995 at 2101.701 kb on + strand, within CA264_08995 at 2101.701 kb on + strand, within CA264_08995 at 2101.702 kb on - strand, within CA264_08995 at 2101.706 kb on - strand, within CA264_08995 at 2101.706 kb on - strand, within CA264_08995 at 2101.706 kb on - strand, within CA264_08995 at 2101.785 kb on - strand, within CA264_08995
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 2 mM remove 2,098,510 + CA264_08985 0.48 +0.2 2,098,514 + CA264_08985 0.49 -0.4 2,098,547 + CA264_08985 0.51 -0.5 2,098,547 + CA264_08985 0.51 -0.4 2,098,548 - CA264_08985 0.51 +0.8 2,098,548 - CA264_08985 0.51 -1.3 2,098,661 + CA264_08985 0.59 -0.2 2,098,682 - CA264_08985 0.60 -1.4 2,098,729 + CA264_08985 0.63 -0.1 2,098,730 - CA264_08985 0.63 -1.1 2,098,850 + CA264_08985 0.72 +0.1 2,098,851 - CA264_08985 0.72 +0.4 2,098,880 - CA264_08985 0.74 +1.1 2,098,958 + CA264_08985 0.79 +0.4 2,098,959 - CA264_08985 0.79 -0.9 2,098,970 + CA264_08985 0.80 -0.9 2,098,979 + CA264_08985 0.80 +0.4 2,099,004 + CA264_08985 0.82 -0.2 2,099,074 + CA264_08985 0.87 +0.5 2,099,074 + CA264_08985 0.87 +0.1 2,099,075 - CA264_08985 0.87 +0.2 2,099,075 - CA264_08985 0.87 -0.4 2,099,085 - CA264_08985 0.88 -0.0 2,099,086 + CA264_08985 0.88 -0.3 2,099,087 - CA264_08985 0.88 -0.2 2,099,088 + CA264_08985 0.88 +0.2 2,099,088 + CA264_08985 0.88 -0.3 2,099,161 + +0.7 2,099,177 - -0.2 2,099,201 + -1.1 2,099,202 - -0.4 2,099,203 + -0.7 2,099,204 - -2.2 2,099,250 + +1.4 2,099,250 + +0.1 2,099,251 - +0.2 2,099,251 - -0.3 2,099,300 - -0.1 2,099,303 + +1.0 2,099,304 - -0.1 2,099,312 - +0.7 2,099,463 + CA264_08990 0.13 -0.2 2,099,463 + CA264_08990 0.13 -0.1 2,099,510 - CA264_08990 0.16 -0.1 2,099,527 + CA264_08990 0.17 -0.1 2,099,550 + CA264_08990 0.18 +1.7 2,099,550 + CA264_08990 0.18 +0.6 2,099,551 - CA264_08990 0.18 +0.2 2,099,551 - CA264_08990 0.18 +0.6 2,099,551 - CA264_08990 0.18 +0.3 2,099,709 + CA264_08990 0.29 +0.3 2,099,725 + CA264_08990 0.30 +0.1 2,099,951 - CA264_08990 0.44 +0.9 2,099,951 - CA264_08990 0.44 +0.4 2,099,987 - CA264_08990 0.47 -0.3 2,099,987 - CA264_08990 0.47 +0.5 2,099,988 + CA264_08990 0.47 +0.7 2,100,028 + CA264_08990 0.49 -0.6 2,100,115 + CA264_08990 0.55 +0.0 2,100,115 + CA264_08990 0.55 -0.4 2,100,129 + CA264_08990 0.56 -0.8 2,100,145 - CA264_08990 0.57 -0.2 2,100,177 - CA264_08990 0.59 -0.5 2,100,178 + CA264_08990 0.59 -0.2 2,100,187 + CA264_08990 0.60 +0.7 2,100,187 + CA264_08990 0.60 -0.1 2,100,188 - CA264_08990 0.60 -0.2 2,100,188 - CA264_08990 0.60 +0.9 2,100,201 + CA264_08990 0.60 -0.0 2,100,280 - CA264_08990 0.66 -0.4 2,100,306 + CA264_08990 0.67 +0.6 2,100,307 - CA264_08990 0.67 -1.0 2,100,307 - CA264_08990 0.67 +0.6 2,100,308 + CA264_08990 0.67 -1.7 2,100,426 + CA264_08990 0.75 -0.1 2,100,427 - CA264_08990 0.75 -0.0 2,100,427 - CA264_08990 0.75 +0.2 2,100,450 - CA264_08990 0.77 -0.3 2,100,531 + CA264_08990 0.82 +0.1 2,100,531 + CA264_08990 0.82 +0.2 2,100,531 + CA264_08990 0.82 -0.1 2,100,585 + CA264_08990 0.85 +1.2 2,100,585 + CA264_08990 0.85 +0.5 2,100,586 - CA264_08990 0.85 +0.0 2,100,636 + CA264_08990 0.89 +0.2 2,100,694 + +0.5 2,100,694 + -0.4 2,100,694 + -0.0 2,100,694 + -1.8 2,100,695 - +0.2 2,100,695 - -2.1 2,100,695 - -0.2 2,100,780 - +1.0 2,100,804 - +0.3 2,100,830 - +0.6 2,100,896 + +0.4 2,100,896 + +0.5 2,100,897 - -0.7 2,100,897 - +0.0 2,100,897 - -0.6 2,100,897 - -1.2 2,100,904 + -0.2 2,100,930 - -0.1 2,101,118 + CA264_08995 0.22 +0.8 2,101,163 + CA264_08995 0.25 -0.0 2,101,219 - CA264_08995 0.29 +1.2 2,101,221 - CA264_08995 0.30 +0.1 2,101,278 + CA264_08995 0.34 -2.2 2,101,280 + CA264_08995 0.34 -0.1 2,101,281 - CA264_08995 0.34 +0.7 2,101,349 + CA264_08995 0.39 -0.8 2,101,352 - CA264_08995 0.39 -0.4 2,101,352 - CA264_08995 0.39 +0.3 2,101,377 - CA264_08995 0.41 -1.1 2,101,543 + CA264_08995 0.53 -1.5 2,101,544 - CA264_08995 0.53 -0.0 2,101,597 + CA264_08995 0.56 +0.7 2,101,659 + CA264_08995 0.61 -0.4 2,101,666 + CA264_08995 0.61 -1.2 2,101,666 + CA264_08995 0.61 +1.2 2,101,666 + CA264_08995 0.61 -1.0 2,101,666 + CA264_08995 0.61 -1.2 2,101,667 - CA264_08995 0.61 -0.6 2,101,701 + CA264_08995 0.64 -0.3 2,101,701 + CA264_08995 0.64 +0.1 2,101,701 + CA264_08995 0.64 +0.3 2,101,702 - CA264_08995 0.64 -0.5 2,101,706 - CA264_08995 0.64 +0.2 2,101,706 - CA264_08995 0.64 -0.4 2,101,706 - CA264_08995 0.64 +0.4 2,101,785 - CA264_08995 0.70 -0.6
Or see this region's nucleotide sequence