Experiment: m.b. Nickel (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03655 and CA264_03660 are separated by 97 nucleotides CA264_03660 and CA264_03665 are separated by 492 nucleotides
CA264_03655: CA264_03655 - multidrug efflux RND transporter permease subunit, at 852,144 to 855,338
_03655
CA264_03660: CA264_03660 - hypothetical protein, at 855,436 to 855,912
_03660
CA264_03665: CA264_03665 - FUSC family protein, at 856,405 to 857,457
_03665
Position (kb) 855
856 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 854.461 kb on + strand, within CA264_03655 at 854.474 kb on + strand, within CA264_03655 at 854.474 kb on + strand, within CA264_03655 at 854.475 kb on - strand, within CA264_03655 at 854.475 kb on - strand, within CA264_03655 at 854.481 kb on + strand, within CA264_03655 at 854.481 kb on + strand, within CA264_03655 at 854.512 kb on - strand, within CA264_03655 at 854.512 kb on - strand, within CA264_03655 at 854.514 kb on + strand, within CA264_03655 at 854.514 kb on + strand, within CA264_03655 at 854.514 kb on + strand, within CA264_03655 at 854.514 kb on + strand, within CA264_03655 at 854.515 kb on - strand, within CA264_03655 at 854.515 kb on - strand, within CA264_03655 at 854.634 kb on - strand, within CA264_03655 at 854.649 kb on + strand, within CA264_03655 at 854.649 kb on + strand, within CA264_03655 at 854.650 kb on - strand, within CA264_03655 at 854.698 kb on + strand, within CA264_03655 at 854.698 kb on + strand, within CA264_03655 at 854.793 kb on - strand, within CA264_03655 at 854.794 kb on + strand, within CA264_03655 at 854.795 kb on - strand, within CA264_03655 at 854.795 kb on - strand, within CA264_03655 at 854.795 kb on - strand, within CA264_03655 at 854.800 kb on + strand, within CA264_03655 at 854.800 kb on + strand, within CA264_03655 at 854.800 kb on + strand, within CA264_03655 at 854.801 kb on - strand, within CA264_03655 at 854.801 kb on - strand, within CA264_03655 at 854.801 kb on - strand, within CA264_03655 at 854.801 kb on - strand, within CA264_03655 at 854.823 kb on + strand, within CA264_03655 at 854.824 kb on - strand, within CA264_03655 at 854.905 kb on + strand, within CA264_03655 at 854.906 kb on - strand, within CA264_03655 at 854.909 kb on + strand, within CA264_03655 at 854.942 kb on + strand, within CA264_03655 at 855.097 kb on + strand at 855.097 kb on + strand at 855.097 kb on + strand at 855.097 kb on + strand at 855.097 kb on + strand at 855.097 kb on + strand at 855.098 kb on - strand at 855.169 kb on + strand at 855.170 kb on - strand at 855.170 kb on - strand at 855.225 kb on + strand at 855.226 kb on - strand at 855.226 kb on - strand at 855.324 kb on + strand at 855.325 kb on - strand at 855.337 kb on - strand at 855.341 kb on - strand at 855.341 kb on - strand at 855.427 kb on + strand at 855.504 kb on + strand, within CA264_03660 at 855.743 kb on - strand, within CA264_03660 at 855.824 kb on - strand, within CA264_03660 at 855.863 kb on - strand, within CA264_03660 at 855.863 kb on - strand, within CA264_03660 at 855.869 kb on + strand at 855.870 kb on - strand at 855.917 kb on + strand at 855.918 kb on - strand at 855.953 kb on + strand at 855.954 kb on - strand at 855.958 kb on + strand at 855.978 kb on - strand at 855.982 kb on + strand at 855.996 kb on + strand at 856.190 kb on + strand at 856.192 kb on + strand at 856.196 kb on + strand at 856.196 kb on + strand at 856.197 kb on - strand at 856.225 kb on - strand at 856.309 kb on - strand at 856.311 kb on + strand at 856.330 kb on - strand at 856.411 kb on - strand at 856.428 kb on - strand at 856.477 kb on - strand at 856.501 kb on + strand at 856.561 kb on + strand, within CA264_03665 at 856.561 kb on + strand, within CA264_03665 at 856.562 kb on - strand, within CA264_03665 at 856.562 kb on - strand, within CA264_03665 at 856.562 kb on - strand, within CA264_03665 at 856.599 kb on - strand, within CA264_03665 at 856.599 kb on - strand, within CA264_03665 at 856.599 kb on - strand, within CA264_03665 at 856.693 kb on + strand, within CA264_03665 at 856.720 kb on + strand, within CA264_03665 at 856.721 kb on - strand, within CA264_03665 at 856.721 kb on - strand, within CA264_03665 at 856.723 kb on + strand, within CA264_03665 at 856.724 kb on - strand, within CA264_03665 at 856.729 kb on - strand, within CA264_03665 at 856.729 kb on - strand, within CA264_03665 at 856.869 kb on + strand, within CA264_03665 at 856.873 kb on + strand, within CA264_03665 at 856.873 kb on + strand, within CA264_03665 at 856.873 kb on + strand, within CA264_03665 at 856.874 kb on - strand, within CA264_03665 at 856.874 kb on - strand, within CA264_03665
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 2 mM remove 854,461 + CA264_03655 0.73 -0.5 854,474 + CA264_03655 0.73 -0.7 854,474 + CA264_03655 0.73 +0.8 854,475 - CA264_03655 0.73 +0.6 854,475 - CA264_03655 0.73 +0.1 854,481 + CA264_03655 0.73 -0.2 854,481 + CA264_03655 0.73 +0.3 854,512 - CA264_03655 0.74 -0.9 854,512 - CA264_03655 0.74 -0.5 854,514 + CA264_03655 0.74 -0.3 854,514 + CA264_03655 0.74 +0.4 854,514 + CA264_03655 0.74 -0.6 854,514 + CA264_03655 0.74 +0.2 854,515 - CA264_03655 0.74 +3.2 854,515 - CA264_03655 0.74 +0.3 854,634 - CA264_03655 0.78 -0.3 854,649 + CA264_03655 0.78 -1.1 854,649 + CA264_03655 0.78 -0.1 854,650 - CA264_03655 0.78 +0.6 854,698 + CA264_03655 0.80 -0.7 854,698 + CA264_03655 0.80 -0.1 854,793 - CA264_03655 0.83 +0.5 854,794 + CA264_03655 0.83 -0.1 854,795 - CA264_03655 0.83 -0.2 854,795 - CA264_03655 0.83 +0.5 854,795 - CA264_03655 0.83 +0.1 854,800 + CA264_03655 0.83 +0.0 854,800 + CA264_03655 0.83 +0.4 854,800 + CA264_03655 0.83 -0.4 854,801 - CA264_03655 0.83 -1.8 854,801 - CA264_03655 0.83 -0.3 854,801 - CA264_03655 0.83 -0.2 854,801 - CA264_03655 0.83 -0.9 854,823 + CA264_03655 0.84 -0.6 854,824 - CA264_03655 0.84 +1.2 854,905 + CA264_03655 0.86 +0.2 854,906 - CA264_03655 0.86 +0.2 854,909 + CA264_03655 0.87 -0.1 854,942 + CA264_03655 0.88 -0.1 855,097 + +0.4 855,097 + -0.9 855,097 + -0.6 855,097 + -0.4 855,097 + -0.5 855,097 + -1.1 855,098 - -1.9 855,169 + -0.5 855,170 - +0.3 855,170 - -1.6 855,225 + -0.6 855,226 - -1.0 855,226 - +0.4 855,324 + -1.3 855,325 - +0.8 855,337 - +0.3 855,341 - +0.5 855,341 - +0.1 855,427 + +0.9 855,504 + CA264_03660 0.14 -0.8 855,743 - CA264_03660 0.64 -0.4 855,824 - CA264_03660 0.81 -0.9 855,863 - CA264_03660 0.90 -0.8 855,863 - CA264_03660 0.90 +1.0 855,869 + -0.4 855,870 - -0.3 855,917 + -0.0 855,918 - -0.6 855,953 + +0.3 855,954 - -0.3 855,958 + +0.1 855,978 - -1.0 855,982 + -2.0 855,996 + -1.3 856,190 + +1.1 856,192 + -0.4 856,196 + -0.1 856,196 + -0.1 856,197 - -1.6 856,225 - -1.7 856,309 - -0.3 856,311 + +0.2 856,330 - -0.0 856,411 - -1.1 856,428 - -0.6 856,477 - -0.3 856,501 + +0.6 856,561 + CA264_03665 0.15 +0.4 856,561 + CA264_03665 0.15 +0.1 856,562 - CA264_03665 0.15 -0.7 856,562 - CA264_03665 0.15 -0.2 856,562 - CA264_03665 0.15 -0.3 856,599 - CA264_03665 0.18 -1.3 856,599 - CA264_03665 0.18 +0.1 856,599 - CA264_03665 0.18 -1.2 856,693 + CA264_03665 0.27 -0.5 856,720 + CA264_03665 0.30 -0.3 856,721 - CA264_03665 0.30 -1.1 856,721 - CA264_03665 0.30 -0.2 856,723 + CA264_03665 0.30 +0.7 856,724 - CA264_03665 0.30 +0.0 856,729 - CA264_03665 0.31 -0.1 856,729 - CA264_03665 0.31 -0.9 856,869 + CA264_03665 0.44 -0.7 856,873 + CA264_03665 0.44 +0.0 856,873 + CA264_03665 0.44 -0.3 856,873 + CA264_03665 0.44 +0.3 856,874 - CA264_03665 0.45 +0.1 856,874 - CA264_03665 0.45 -0.2
Or see this region's nucleotide sequence