Experiment: m.b. Nickel (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01960 and CA264_01965 are separated by 306 nucleotides CA264_01965 and CA264_01970 are separated by 295 nucleotides CA264_01970 and CA264_01975 are separated by 82 nucleotides
CA264_01960: CA264_01960 - competence protein ComEC, at 453,399 to 455,510
_01960
CA264_01965: CA264_01965 - tRNA-Leu, at 455,817 to 455,898
_01965
CA264_01970: CA264_01970 - multidrug ABC transporter ATP-binding protein, at 456,194 to 456,952
_01970
CA264_01975: CA264_01975 - hypothetical protein, at 457,035 to 458,396
_01975
Position (kb) 456
457 Strain fitness (log2 ratio) -1
0
1
2 at 455.275 kb on + strand, within CA264_01960 at 455.376 kb on + strand at 455.376 kb on + strand at 455.377 kb on - strand at 455.377 kb on - strand at 455.377 kb on - strand at 455.378 kb on + strand at 455.379 kb on - strand at 455.466 kb on + strand at 455.469 kb on + strand at 455.469 kb on + strand at 455.469 kb on + strand at 455.470 kb on - strand at 455.547 kb on - strand at 455.730 kb on + strand at 455.753 kb on + strand at 455.753 kb on + strand at 455.753 kb on + strand at 455.754 kb on - strand at 455.939 kb on + strand at 455.939 kb on + strand at 455.940 kb on - strand at 455.970 kb on + strand at 455.971 kb on - strand at 455.971 kb on - strand at 455.982 kb on + strand at 455.982 kb on + strand at 456.010 kb on + strand at 456.017 kb on - strand at 456.074 kb on + strand at 456.113 kb on + strand at 456.124 kb on + strand at 456.126 kb on + strand at 456.150 kb on - strand at 456.150 kb on - strand at 456.201 kb on + strand at 456.202 kb on - strand at 456.208 kb on - strand at 456.597 kb on - strand, within CA264_01970 at 456.597 kb on - strand, within CA264_01970 at 456.779 kb on + strand, within CA264_01970 at 456.780 kb on - strand, within CA264_01970 at 456.780 kb on - strand, within CA264_01970 at 456.784 kb on - strand, within CA264_01970 at 456.834 kb on - strand, within CA264_01970 at 456.834 kb on - strand, within CA264_01970 at 457.024 kb on + strand at 457.024 kb on + strand at 457.028 kb on + strand at 457.033 kb on - strand at 457.033 kb on - strand at 457.079 kb on - strand at 457.143 kb on + strand at 457.143 kb on + strand at 457.144 kb on - strand at 457.204 kb on + strand, within CA264_01975 at 457.204 kb on + strand, within CA264_01975 at 457.205 kb on - strand, within CA264_01975 at 457.221 kb on + strand, within CA264_01975 at 457.222 kb on - strand, within CA264_01975 at 457.224 kb on - strand, within CA264_01975 at 457.236 kb on - strand, within CA264_01975 at 457.275 kb on + strand, within CA264_01975 at 457.275 kb on + strand, within CA264_01975 at 457.276 kb on - strand, within CA264_01975 at 457.276 kb on - strand, within CA264_01975 at 457.422 kb on + strand, within CA264_01975 at 457.475 kb on - strand, within CA264_01975 at 457.550 kb on + strand, within CA264_01975 at 457.595 kb on + strand, within CA264_01975 at 457.708 kb on + strand, within CA264_01975 at 457.709 kb on - strand, within CA264_01975 at 457.713 kb on + strand, within CA264_01975 at 457.714 kb on - strand, within CA264_01975 at 457.892 kb on - strand, within CA264_01975 at 457.914 kb on + strand, within CA264_01975 at 457.915 kb on - strand, within CA264_01975
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 2 mM remove 455,275 + CA264_01960 0.89 -0.1 455,376 + -0.4 455,376 + -1.2 455,377 - -0.0 455,377 - -0.1 455,377 - +2.2 455,378 + +0.1 455,379 - -0.3 455,466 + -0.3 455,469 + +0.2 455,469 + -0.4 455,469 + +0.3 455,470 - -0.0 455,547 - -0.3 455,730 + -0.5 455,753 + +0.4 455,753 + +0.2 455,753 + -0.3 455,754 - +0.0 455,939 + +0.2 455,939 + -0.9 455,940 - -0.6 455,970 + -0.8 455,971 - -0.2 455,971 - -1.1 455,982 + +0.3 455,982 + -0.3 456,010 + -0.5 456,017 - -0.3 456,074 + -0.7 456,113 + -0.6 456,124 + -0.0 456,126 + +1.4 456,150 - +0.1 456,150 - -0.3 456,201 + -0.7 456,202 - -0.8 456,208 - -1.4 456,597 - CA264_01970 0.53 +0.2 456,597 - CA264_01970 0.53 +0.2 456,779 + CA264_01970 0.77 +0.5 456,780 - CA264_01970 0.77 +0.6 456,780 - CA264_01970 0.77 +1.7 456,784 - CA264_01970 0.78 +0.2 456,834 - CA264_01970 0.84 +0.1 456,834 - CA264_01970 0.84 -0.5 457,024 + -0.2 457,024 + +0.1 457,028 + +1.0 457,033 - +0.0 457,033 - -0.5 457,079 - -0.5 457,143 + -0.2 457,143 + +0.3 457,144 - -0.2 457,204 + CA264_01975 0.12 -0.1 457,204 + CA264_01975 0.12 -0.7 457,205 - CA264_01975 0.12 -0.6 457,221 + CA264_01975 0.14 -0.7 457,222 - CA264_01975 0.14 -0.6 457,224 - CA264_01975 0.14 -1.5 457,236 - CA264_01975 0.15 +0.4 457,275 + CA264_01975 0.18 -1.6 457,275 + CA264_01975 0.18 +0.2 457,276 - CA264_01975 0.18 +1.3 457,276 - CA264_01975 0.18 -0.6 457,422 + CA264_01975 0.28 -0.0 457,475 - CA264_01975 0.32 -0.6 457,550 + CA264_01975 0.38 -1.1 457,595 + CA264_01975 0.41 +0.7 457,708 + CA264_01975 0.49 +0.0 457,709 - CA264_01975 0.49 +0.3 457,713 + CA264_01975 0.50 -0.2 457,714 - CA264_01975 0.50 -0.5 457,892 - CA264_01975 0.63 +0.8 457,914 + CA264_01975 0.65 -0.3 457,915 - CA264_01975 0.65 +0.0
Or see this region's nucleotide sequence