Experiment: m.b. Nickel (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00870 and CA264_00875 are separated by 20 nucleotides CA264_00875 and CA264_00880 are separated by 258 nucleotides CA264_00880 and CA264_00885 are separated by 373 nucleotides
CA264_00870: CA264_00870 - DNA translocase FtsK, at 185,314 to 187,944
_00870
CA264_00875: CA264_00875 - cell envelope biogenesis protein LolA, at 187,965 to 188,609
_00875
CA264_00880: CA264_00880 - orotidine 5'-phosphate decarboxylase, at 188,868 to 189,695
_00880
CA264_00885: CA264_00885 - hypothetical protein, at 190,069 to 190,440
_00885
Position (kb) 188
189
190 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 187.950 kb on + strand at 187.951 kb on - strand at 187.951 kb on - strand at 187.953 kb on + strand at 187.953 kb on + strand at 187.954 kb on - strand at 187.984 kb on + strand at 188.073 kb on + strand, within CA264_00875 at 188.178 kb on - strand, within CA264_00875 at 188.232 kb on + strand, within CA264_00875 at 188.232 kb on + strand, within CA264_00875 at 188.232 kb on + strand, within CA264_00875 at 188.322 kb on + strand, within CA264_00875 at 188.322 kb on + strand, within CA264_00875 at 188.324 kb on + strand, within CA264_00875 at 188.335 kb on - strand, within CA264_00875 at 188.336 kb on + strand, within CA264_00875 at 188.336 kb on + strand, within CA264_00875 at 188.336 kb on + strand, within CA264_00875 at 188.336 kb on + strand, within CA264_00875 at 188.336 kb on + strand, within CA264_00875 at 188.336 kb on + strand, within CA264_00875 at 188.337 kb on - strand, within CA264_00875 at 188.346 kb on + strand, within CA264_00875 at 188.390 kb on - strand, within CA264_00875 at 188.431 kb on + strand, within CA264_00875 at 188.439 kb on + strand, within CA264_00875 at 188.440 kb on - strand, within CA264_00875 at 188.504 kb on + strand, within CA264_00875 at 188.505 kb on - strand, within CA264_00875 at 188.509 kb on - strand, within CA264_00875 at 188.510 kb on + strand, within CA264_00875 at 188.559 kb on - strand at 188.578 kb on - strand at 188.578 kb on - strand at 188.579 kb on + strand at 188.603 kb on - strand at 188.608 kb on - strand at 188.622 kb on + strand at 188.623 kb on - strand at 188.627 kb on + strand at 188.665 kb on + strand at 188.669 kb on + strand at 188.757 kb on + strand at 188.757 kb on + strand at 188.758 kb on - strand at 188.758 kb on - strand at 188.780 kb on + strand at 188.780 kb on + strand at 188.843 kb on + strand at 188.844 kb on - strand at 188.914 kb on - strand at 189.036 kb on + strand, within CA264_00880 at 189.036 kb on + strand, within CA264_00880 at 189.037 kb on - strand, within CA264_00880 at 189.057 kb on + strand, within CA264_00880 at 189.058 kb on - strand, within CA264_00880 at 189.232 kb on - strand, within CA264_00880 at 189.361 kb on - strand, within CA264_00880 at 189.421 kb on - strand, within CA264_00880 at 189.448 kb on - strand, within CA264_00880 at 189.594 kb on + strand, within CA264_00880 at 189.594 kb on + strand, within CA264_00880 at 189.595 kb on - strand, within CA264_00880 at 189.699 kb on + strand at 189.699 kb on + strand at 189.699 kb on + strand at 189.699 kb on + strand at 189.700 kb on - strand at 189.714 kb on - strand at 189.773 kb on + strand at 189.774 kb on - strand at 189.774 kb on - strand at 189.779 kb on + strand at 189.779 kb on + strand at 189.779 kb on + strand at 189.782 kb on + strand at 189.783 kb on - strand at 189.792 kb on - strand at 189.798 kb on + strand at 189.798 kb on + strand at 189.911 kb on + strand at 189.912 kb on - strand at 189.921 kb on + strand at 189.982 kb on + strand at 189.982 kb on + strand at 189.983 kb on - strand at 189.983 kb on - strand at 189.989 kb on + strand at 190.047 kb on + strand at 190.047 kb on + strand at 190.048 kb on - strand at 190.048 kb on - strand at 190.048 kb on - strand at 190.052 kb on - strand at 190.063 kb on + strand at 190.097 kb on + strand at 190.098 kb on - strand at 190.099 kb on + strand at 190.100 kb on - strand at 190.102 kb on - strand at 190.122 kb on + strand, within CA264_00885 at 190.123 kb on - strand, within CA264_00885 at 190.137 kb on - strand, within CA264_00885 at 190.152 kb on - strand, within CA264_00885 at 190.157 kb on + strand, within CA264_00885 at 190.158 kb on - strand, within CA264_00885 at 190.194 kb on + strand, within CA264_00885 at 190.197 kb on + strand, within CA264_00885 at 190.250 kb on - strand, within CA264_00885 at 190.251 kb on + strand, within CA264_00885 at 190.324 kb on + strand, within CA264_00885 at 190.326 kb on + strand, within CA264_00885 at 190.338 kb on + strand, within CA264_00885 at 190.338 kb on + strand, within CA264_00885 at 190.346 kb on + strand, within CA264_00885 at 190.347 kb on - strand, within CA264_00885 at 190.347 kb on - strand, within CA264_00885 at 190.357 kb on + strand, within CA264_00885 at 190.364 kb on - strand, within CA264_00885 at 190.369 kb on - strand, within CA264_00885 at 190.380 kb on - strand, within CA264_00885 at 190.384 kb on - strand, within CA264_00885 at 190.410 kb on - strand at 190.416 kb on - strand at 190.416 kb on - strand at 190.416 kb on - strand at 190.421 kb on + strand at 190.492 kb on + strand at 190.503 kb on - strand at 190.551 kb on + strand at 190.551 kb on + strand at 190.556 kb on + strand at 190.556 kb on + strand at 190.557 kb on - strand at 190.576 kb on + strand at 190.612 kb on + strand at 190.612 kb on + strand at 190.631 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 2 mM remove 187,950 + -3.0 187,951 - -0.3 187,951 - -0.7 187,953 + -1.1 187,953 + -1.8 187,954 - -1.1 187,984 + -2.0 188,073 + CA264_00875 0.17 -2.7 188,178 - CA264_00875 0.33 -3.3 188,232 + CA264_00875 0.41 -1.6 188,232 + CA264_00875 0.41 -0.3 188,232 + CA264_00875 0.41 -1.2 188,322 + CA264_00875 0.55 -2.3 188,322 + CA264_00875 0.55 -1.2 188,324 + CA264_00875 0.56 -0.2 188,335 - CA264_00875 0.57 -1.4 188,336 + CA264_00875 0.58 -2.6 188,336 + CA264_00875 0.58 -3.0 188,336 + CA264_00875 0.58 +0.4 188,336 + CA264_00875 0.58 -2.6 188,336 + CA264_00875 0.58 +0.1 188,336 + CA264_00875 0.58 -0.9 188,337 - CA264_00875 0.58 +0.4 188,346 + CA264_00875 0.59 -4.9 188,390 - CA264_00875 0.66 -1.2 188,431 + CA264_00875 0.72 -4.1 188,439 + CA264_00875 0.73 -2.2 188,440 - CA264_00875 0.74 -2.2 188,504 + CA264_00875 0.84 -2.2 188,505 - CA264_00875 0.84 -3.3 188,509 - CA264_00875 0.84 -3.6 188,510 + CA264_00875 0.84 -1.3 188,559 - -2.5 188,578 - -1.5 188,578 - -0.9 188,579 + -0.2 188,603 - +0.1 188,608 - -0.3 188,622 + +0.6 188,623 - +0.1 188,627 + -0.7 188,665 + +0.6 188,669 + -0.1 188,757 + +0.6 188,757 + -0.4 188,758 - -1.1 188,758 - -0.7 188,780 + +1.4 188,780 + -0.7 188,843 + +0.4 188,844 - +0.3 188,914 - +0.7 189,036 + CA264_00880 0.20 -1.0 189,036 + CA264_00880 0.20 -0.3 189,037 - CA264_00880 0.20 -0.3 189,057 + CA264_00880 0.23 -2.0 189,058 - CA264_00880 0.23 -1.1 189,232 - CA264_00880 0.44 -0.1 189,361 - CA264_00880 0.60 +0.1 189,421 - CA264_00880 0.67 -0.7 189,448 - CA264_00880 0.70 +0.4 189,594 + CA264_00880 0.88 +0.2 189,594 + CA264_00880 0.88 -0.9 189,595 - CA264_00880 0.88 -0.5 189,699 + +0.3 189,699 + -2.0 189,699 + -1.0 189,699 + -0.9 189,700 - -0.8 189,714 - -0.6 189,773 + -0.7 189,774 - +0.2 189,774 - +0.2 189,779 + -1.1 189,779 + -0.1 189,779 + +0.7 189,782 + +0.1 189,783 - +0.5 189,792 - +1.4 189,798 + -2.1 189,798 + -2.0 189,911 + -0.0 189,912 - -0.9 189,921 + -0.0 189,982 + -1.3 189,982 + -0.3 189,983 - +0.0 189,983 - -0.3 189,989 + +0.4 190,047 + +2.8 190,047 + -0.4 190,048 - +0.1 190,048 - +0.1 190,048 - -0.6 190,052 - +0.5 190,063 + -0.0 190,097 + +1.9 190,098 - -0.2 190,099 + -0.3 190,100 - -0.4 190,102 - -0.7 190,122 + CA264_00885 0.14 -0.0 190,123 - CA264_00885 0.15 -0.2 190,137 - CA264_00885 0.18 -0.0 190,152 - CA264_00885 0.22 -0.4 190,157 + CA264_00885 0.24 -1.0 190,158 - CA264_00885 0.24 -0.6 190,194 + CA264_00885 0.34 +0.2 190,197 + CA264_00885 0.34 +0.4 190,250 - CA264_00885 0.49 +0.4 190,251 + CA264_00885 0.49 -0.4 190,324 + CA264_00885 0.69 +0.3 190,326 + CA264_00885 0.69 +0.7 190,338 + CA264_00885 0.72 -0.2 190,338 + CA264_00885 0.72 -0.6 190,346 + CA264_00885 0.74 -0.2 190,347 - CA264_00885 0.75 -0.6 190,347 - CA264_00885 0.75 +0.3 190,357 + CA264_00885 0.77 -0.2 190,364 - CA264_00885 0.79 +1.2 190,369 - CA264_00885 0.81 -0.6 190,380 - CA264_00885 0.84 -0.2 190,384 - CA264_00885 0.85 -0.5 190,410 - -1.3 190,416 - +0.1 190,416 - -0.5 190,416 - -1.7 190,421 + +0.3 190,492 + -0.3 190,503 - +0.1 190,551 + -0.8 190,551 + +1.1 190,556 + +0.4 190,556 + +1.1 190,557 - -0.2 190,576 + -0.3 190,612 + -0.0 190,612 + -0.9 190,631 + +0.8
Or see this region's nucleotide sequence