Strain Fitness in Variovorax sp. OAS795 around ABID97_RS25260

Experiment: succinate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABID97_RS25255 and ABID97_RS25260 are separated by 98 nucleotidesABID97_RS25260 and ABID97_RS25265 are separated by 34 nucleotides ABID97_RS25255: ABID97_RS25255 - glycine--tRNA ligase subunit beta, at 5,232,719 to 5,234,851 _RS25255 ABID97_RS25260: ABID97_RS25260 - metal-dependent hydrolase, at 5,234,950 to 5,235,501 _RS25260 ABID97_RS25265: ABID97_RS25265 - glycine--tRNA ligase subunit alpha, at 5,235,536 to 5,236,444 _RS25265 Position (kb) 5234 5235 5236Strain fitness (log2 ratio) -1 0 1at 5235.135 kb on - strand, within ABID97_RS25260at 5235.351 kb on - strand, within ABID97_RS25260

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Per-strain Table

Position Strand Gene LocusTag Fraction succinate (C)
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5,235,135 - ABID97_RS25260 0.34 -0.5
5,235,351 - ABID97_RS25260 0.73 -1.2

Or see this region's nucleotide sequence