Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt eutI and eutT overlap by 4 nucleotides eutT and eutQ overlap by 4 nucleotides eutQ and eutP overlap by 26 nucleotides
b2458: eutI - predicted phosphotransacetylase subunit (NCBI), at 2,570,511 to 2,571,527
eutI
b2459: eutT - predicted cobalamin adenosyltransferase in ethanolamine utilization (NCBI), at 2,571,524 to 2,572,327
eutT
b2460: eutQ - hypothetical protein (NCBI), at 2,572,324 to 2,573,025
eutQ
b2461: eutP - conserved protein with nucleoside triphosphate hydrolase domain (NCBI), at 2,573,000 to 2,573,479
eutP
Position (kb)
2571
2572
2573 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2570.654 kb on - strand, within eutI at 2570.989 kb on + strand, within eutI at 2570.989 kb on + strand, within eutI at 2571.039 kb on + strand, within eutI at 2571.065 kb on - strand, within eutI at 2571.148 kb on + strand, within eutI at 2571.148 kb on + strand, within eutI at 2571.330 kb on - strand, within eutI at 2571.337 kb on - strand, within eutI at 2571.337 kb on - strand, within eutI at 2571.441 kb on + strand at 2571.561 kb on + strand at 2571.561 kb on + strand at 2571.564 kb on - strand at 2571.599 kb on + strand at 2571.603 kb on - strand at 2571.603 kb on - strand at 2571.655 kb on + strand, within eutT at 2571.812 kb on + strand, within eutT at 2571.924 kb on + strand, within eutT at 2571.924 kb on + strand, within eutT at 2571.985 kb on - strand, within eutT at 2571.985 kb on - strand, within eutT at 2572.113 kb on + strand, within eutT at 2572.134 kb on + strand, within eutT at 2572.134 kb on + strand, within eutT at 2572.153 kb on - strand, within eutT at 2572.405 kb on + strand, within eutQ at 2572.471 kb on - strand, within eutQ at 2572.471 kb on - strand, within eutQ at 2572.477 kb on + strand, within eutQ at 2572.539 kb on + strand, within eutQ at 2572.539 kb on + strand, within eutQ at 2572.539 kb on + strand, within eutQ at 2572.539 kb on + strand, within eutQ at 2572.584 kb on - strand, within eutQ at 2573.126 kb on + strand, within eutP at 2573.186 kb on - strand, within eutP at 2573.186 kb on - strand, within eutP at 2573.222 kb on - strand, within eutP at 2573.225 kb on + strand, within eutP at 2573.225 kb on + strand, within eutP at 2573.237 kb on - strand, within eutP at 2573.260 kb on + strand, within eutP at 2573.260 kb on + strand, within eutP at 2573.278 kb on + strand, within eutP at 2573.278 kb on + strand, within eutP at 2573.279 kb on - strand, within eutP at 2573.281 kb on + strand, within eutP at 2573.281 kb on + strand, within eutP at 2573.281 kb on + strand, within eutP at 2573.281 kb on + strand, within eutP at 2573.281 kb on + strand, within eutP at 2573.281 kb on - strand, within eutP at 2573.281 kb on - strand, within eutP at 2573.282 kb on + strand, within eutP at 2573.282 kb on + strand, within eutP at 2573.283 kb on + strand, within eutP at 2573.283 kb on + strand, within eutP at 2573.283 kb on + strand, within eutP at 2573.284 kb on - strand, within eutP at 2573.286 kb on - strand, within eutP at 2573.291 kb on - strand, within eutP at 2573.291 kb on - strand, within eutP at 2573.304 kb on + strand, within eutP at 2573.304 kb on + strand, within eutP at 2573.304 kb on + strand, within eutP at 2573.312 kb on - strand, within eutP at 2573.315 kb on + strand, within eutP
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 2,570,654 - eutI b2458 0.14 -0.2 2,570,989 + eutI b2458 0.47 -0.3 2,570,989 + eutI b2458 0.47 -0.2 2,571,039 + eutI b2458 0.52 +1.4 2,571,065 - eutI b2458 0.54 -0.1 2,571,148 + eutI b2458 0.63 +0.9 2,571,148 + eutI b2458 0.63 -0.1 2,571,330 - eutI b2458 0.81 -0.9 2,571,337 - eutI b2458 0.81 -1.0 2,571,337 - eutI b2458 0.81 -0.1 2,571,441 + +0.7 2,571,561 + -0.2 2,571,561 + -0.6 2,571,564 - -0.3 2,571,599 + -0.0 2,571,603 - +0.1 2,571,603 - +0.6 2,571,655 + eutT b2459 0.16 -1.8 2,571,812 + eutT b2459 0.36 +0.2 2,571,924 + eutT b2459 0.50 +0.4 2,571,924 + eutT b2459 0.50 -0.0 2,571,985 - eutT b2459 0.57 -0.4 2,571,985 - eutT b2459 0.57 -0.5 2,572,113 + eutT b2459 0.73 -0.3 2,572,134 + eutT b2459 0.76 -1.2 2,572,134 + eutT b2459 0.76 -2.2 2,572,153 - eutT b2459 0.78 +0.2 2,572,405 + eutQ b2460 0.12 +0.1 2,572,471 - eutQ b2460 0.21 -0.3 2,572,471 - eutQ b2460 0.21 -0.9 2,572,477 + eutQ b2460 0.22 +0.6 2,572,539 + eutQ b2460 0.31 -0.2 2,572,539 + eutQ b2460 0.31 -0.0 2,572,539 + eutQ b2460 0.31 +0.3 2,572,539 + eutQ b2460 0.31 +0.2 2,572,584 - eutQ b2460 0.37 -0.3 2,573,126 + eutP b2461 0.26 +0.1 2,573,186 - eutP b2461 0.39 +0.8 2,573,186 - eutP b2461 0.39 -0.0 2,573,222 - eutP b2461 0.46 +1.1 2,573,225 + eutP b2461 0.47 +0.6 2,573,225 + eutP b2461 0.47 +0.4 2,573,237 - eutP b2461 0.49 -0.1 2,573,260 + eutP b2461 0.54 +0.2 2,573,260 + eutP b2461 0.54 -0.6 2,573,278 + eutP b2461 0.58 +0.1 2,573,278 + eutP b2461 0.58 +1.0 2,573,279 - eutP b2461 0.58 +0.0 2,573,281 + eutP b2461 0.59 +2.2 2,573,281 + eutP b2461 0.59 -1.3 2,573,281 + eutP b2461 0.59 +0.1 2,573,281 + eutP b2461 0.59 -2.0 2,573,281 + eutP b2461 0.59 -0.1 2,573,281 - eutP b2461 0.59 +0.7 2,573,281 - eutP b2461 0.59 +1.8 2,573,282 + eutP b2461 0.59 -0.6 2,573,282 + eutP b2461 0.59 +0.1 2,573,283 + eutP b2461 0.59 +0.7 2,573,283 + eutP b2461 0.59 +0.1 2,573,283 + eutP b2461 0.59 -0.4 2,573,284 - eutP b2461 0.59 -0.6 2,573,286 - eutP b2461 0.60 -0.5 2,573,291 - eutP b2461 0.61 +0.7 2,573,291 - eutP b2461 0.61 +0.4 2,573,304 + eutP b2461 0.63 -1.3 2,573,304 + eutP b2461 0.63 +0.1 2,573,304 + eutP b2461 0.63 -1.0 2,573,312 - eutP b2461 0.65 +0.5 2,573,315 + eutP b2461 0.66 +0.6
Or see this region's nucleotide sequence