Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2753

Experiment: KB with Carbenicillin 3.1 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Carbenicillin 3.1 ug/ml
3,340,196	+		Psyr_2751	0.72	+0.0
3,340,196	+		Psyr_2751	0.72	+0.2
3,340,196	+		Psyr_2751	0.72	+0.6
3,340,196	+		Psyr_2751	0.72	-2.0
3,340,196	+		Psyr_2751	0.72	-1.0
3,340,197	-		Psyr_2751	0.72	-0.9
3,340,197	-		Psyr_2751	0.72	+1.6
3,340,197	-		Psyr_2751	0.72	+0.2
3,340,197	-		Psyr_2751	0.72	+0.4
3,340,288	-		Psyr_2751	0.81	+2.1
3,340,343	+		Psyr_2751	0.87	+0.1
3,340,343	+		Psyr_2751	0.87	-0.7
3,340,343	+		Psyr_2751	0.87	-0.4
3,340,344	-		Psyr_2751	0.87	-0.3
3,340,344	-		Psyr_2751	0.87	-1.6
3,340,344	-		Psyr_2751	0.87	+0.2
3,340,344	-		Psyr_2751	0.87	+0.6
3,340,344	-		Psyr_2751	0.87	+1.0
3,340,385	+				+0.7
3,340,385	+				+1.1
3,340,548	+				+1.0
3,341,079	+		Psyr_2752	0.83	+1.0
3,341,079	+		Psyr_2752	0.83	+0.2
3,341,080	-		Psyr_2752	0.83	-0.2
3,341,130	+				-1.3
3,341,131	-				+0.8
3,341,176	-				-0.3
3,341,475	+		Psyr_2753	0.32	+1.0
3,341,475	+		Psyr_2753	0.32	+1.0
3,341,475	+		Psyr_2753	0.32	-0.4
3,341,476	-		Psyr_2753	0.32	+0.4
3,341,476	-		Psyr_2753	0.32	+0.4
3,341,476	-		Psyr_2753	0.32	+1.6
3,341,476	-		Psyr_2753	0.32	+1.7
3,341,476	-		Psyr_2753	0.32	-0.2
3,341,476	-		Psyr_2753	0.32	-1.0
3,341,476	-		Psyr_2753	0.32	-1.3
3,342,023	+		Psyr_2753	0.87	+3.6
3,342,023	+		Psyr_2753	0.87	+0.4
3,342,024	-		Psyr_2753	0.87	+0.8
3,342,024	-		Psyr_2753	0.87	+1.3
3,342,147	+				+2.3
3,342,147	+				+1.9
3,342,148	-				-1.0
3,342,148	-				+1.6
3,342,248	-				-2.4
3,342,256	+				+1.6
3,342,484	-		Psyr_2754	0.43	-0.8
3,342,600	+		Psyr_2754	0.61	+0.6
3,342,645	+		Psyr_2754	0.68	+0.4
3,342,645	+		Psyr_2754	0.68	+0.1
3,342,645	+		Psyr_2754	0.68	-1.2
3,342,645	+		Psyr_2754	0.68	-2.4
3,342,646	-		Psyr_2754	0.68	+0.8
3,342,646	-		Psyr_2754	0.68	-1.0
3,342,646	-		Psyr_2754	0.68	-0.0
3,342,652	-		Psyr_2754	0.69	+1.1
3,342,652	-		Psyr_2754	0.69	+2.3
3,342,690	+		Psyr_2754	0.75	-1.1
3,342,690	+		Psyr_2754	0.75	-2.0
3,342,691	-		Psyr_2754	0.75	+0.7
3,342,691	-		Psyr_2754	0.75	-0.8
3,342,691	-		Psyr_2754	0.75	+0.7
3,342,691	-		Psyr_2754	0.75	-0.8
3,342,691	-		Psyr_2754	0.75	+1.6