Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2623

Experiment: KB with Carbenicillin 3.1 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Carbenicillin 3.1 ug/ml
3,182,029	+		Psyr_2622	0.71	+2.0
3,182,039	-		Psyr_2622	0.71	-1.3
3,182,340	-		Psyr_2622	0.81	-1.1
3,182,424	+		Psyr_2622	0.84	-0.6
3,182,424	+		Psyr_2622	0.84	+0.2
3,182,424	+		Psyr_2622	0.84	-0.0
3,182,425	-		Psyr_2622	0.84	-0.6
3,182,425	-		Psyr_2622	0.84	-0.3
3,182,426	+		Psyr_2622	0.84	-0.6
3,182,426	+		Psyr_2622	0.84	-0.2
3,182,426	+		Psyr_2622	0.84	-1.0
3,182,426	+		Psyr_2622	0.84	-0.4
3,182,427	-		Psyr_2622	0.84	-1.4
3,182,428	+		Psyr_2622	0.84	+0.3
3,182,428	+		Psyr_2622	0.84	-1.3
3,182,429	-		Psyr_2622	0.84	+0.7
3,182,429	-		Psyr_2622	0.84	+1.2
3,182,823	-				+0.7
3,182,825	+				-2.4
3,182,826	-				+2.6
3,182,853	+				-2.1
3,182,854	-				+0.7
3,182,857	+				+1.7
3,182,857	+				+0.7
3,182,857	+				-2.3
3,182,857	+				-1.8
3,182,858	-				-0.4
3,182,858	-				-1.6
3,182,895	+				+1.0
3,182,896	-				-3.1
3,183,071	+				+0.6
3,183,097	-				-2.1
3,183,097	-				+1.4
3,183,098	+				+1.6
3,183,098	+				+0.2
3,183,098	+				+0.6
3,183,098	+				+0.2
3,183,098	+				-0.9
3,183,098	+				-0.8
3,183,098	+				-1.3
3,183,098	+				-0.6
3,183,099	-				+1.2
3,183,099	-				+0.4
3,183,099	-				+0.4
3,183,099	-				-0.0
3,183,314	+		Psyr_2623	0.25	+0.4
3,183,436	+		Psyr_2623	0.35	-1.8
3,183,436	+		Psyr_2623	0.35	-0.8
3,183,437	-		Psyr_2623	0.35	-0.0
3,183,565	-		Psyr_2623	0.45	+0.8
3,183,672	+		Psyr_2623	0.54	-1.0
3,183,672	+		Psyr_2623	0.54	-0.9
3,183,672	+		Psyr_2623	0.54	+0.3
3,183,740	+		Psyr_2623	0.59	+0.6
3,183,753	-		Psyr_2623	0.60	-0.7
3,183,764	+		Psyr_2623	0.61	-1.9
3,183,885	-		Psyr_2623	0.71	-0.8
3,183,905	-		Psyr_2623	0.72	-0.6
3,183,905	-		Psyr_2623	0.72	+0.6
3,183,906	+		Psyr_2623	0.72	-1.9
3,183,949	+		Psyr_2623	0.76	+0.3
3,184,089	-		Psyr_2623	0.87	+1.1
3,184,298	+				-1.0
3,184,299	-				-1.0
3,184,303	-				+2.0
3,184,309	+				-0.9
3,184,326	+				+1.1
3,184,326	+				+0.3
3,184,327	-				-1.6
3,184,327	-				+1.6
3,184,327	-				+0.6
3,184,597	+		Psyr_2624	0.58	+2.1
3,184,597	+		Psyr_2624	0.58	+1.2
3,184,673	-		Psyr_2624	0.73	-0.8
3,184,799	+				-1.3
3,184,802	+				+0.4
3,184,970	+		Psyr_2625	0.21	+0.7
3,184,971	-		Psyr_2625	0.21	-1.0
3,184,978	+		Psyr_2625	0.22	+0.6
3,185,144	+		Psyr_2625	0.44	+0.3
3,185,144	+		Psyr_2625	0.44	-2.8
3,185,144	+		Psyr_2625	0.44	-1.3
3,185,149	-		Psyr_2625	0.45	-1.7
3,185,179	+		Psyr_2625	0.49	-0.6
3,185,244	-		Psyr_2625	0.58	-1.8
3,185,246	+		Psyr_2625	0.58	-0.2
3,185,247	-		Psyr_2625	0.58	-0.1
3,185,247	-		Psyr_2625	0.58	-0.1
3,185,247	-		Psyr_2625	0.58	+1.0
3,185,249	+		Psyr_2625	0.59	-1.3
3,185,249	+		Psyr_2625	0.59	-0.8
3,185,249	+		Psyr_2625	0.59	-2.0
3,185,249	+		Psyr_2625	0.59	-1.9