Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1322

Experiment: KB with Carbenicillin 3.1 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Carbenicillin 3.1 ug/ml
1,499,474	+				-2.6
1,499,474	+				-1.3
1,499,475	-				+0.0
1,499,475	-				+0.4
1,499,475	-				-0.3
1,499,589	-				-0.1
1,499,644	+				+0.0
1,499,644	+				+1.0
1,499,644	+				+0.7
1,499,644	+				-0.1
1,499,653	+				-0.6
1,499,654	-				-1.7
1,499,679	+				-0.7
1,499,680	-				-0.6
1,499,680	-				-0.6
1,499,680	-				-1.4
1,499,680	-				-0.4
1,499,680	-				-1.3
1,499,695	+				-0.9
1,499,719	+				-1.1
1,499,723	+				-2.3
1,499,723	+				-1.3
1,499,736	+				+0.3
1,499,737	-				+1.1
1,499,904	+		Psyr_1321	0.56	+0.6
1,499,904	+		Psyr_1321	0.56	+0.2
1,499,904	+		Psyr_1321	0.56	-0.1
1,499,905	-		Psyr_1321	0.56	+1.1
1,499,975	+		Psyr_1321	0.79	-1.4
1,499,975	+		Psyr_1321	0.79	+0.4
1,499,976	-		Psyr_1321	0.79	-1.4
1,499,976	-		Psyr_1321	0.79	-2.3
1,499,976	-		Psyr_1321	0.79	+0.3
1,499,976	-		Psyr_1321	0.79	+0.3
1,499,976	-		Psyr_1321	0.79	+0.2
1,499,976	-		Psyr_1321	0.79	+0.1
1,499,976	-		Psyr_1321	0.79	-0.9
1,499,976	-		Psyr_1321	0.79	+1.0
1,499,976	-		Psyr_1321	0.79	-1.9
1,499,978	+		Psyr_1321	0.80	-0.6
1,499,978	-		Psyr_1321	0.80	-1.4
1,500,059	-				-0.4
1,500,059	-				+1.9
1,500,059	-				-0.1
1,500,061	+				-0.3
1,500,061	+				-0.9
1,500,061	+				-0.1
1,500,062	-				+0.1
1,500,062	-				+1.4
1,500,110	-				+0.2
1,500,148	+		Psyr_1322	0.12	-2.2
1,500,190	+		Psyr_1322	0.17	-0.4
1,500,190	+		Psyr_1322	0.17	+0.9
1,500,191	-		Psyr_1322	0.17	-2.0
1,500,211	-		Psyr_1322	0.19	-1.6
1,500,233	+		Psyr_1322	0.22	+0.6
1,500,233	+		Psyr_1322	0.22	+2.2
1,500,233	+		Psyr_1322	0.22	-0.1
1,500,234	-		Psyr_1322	0.22	-0.3
1,500,234	-		Psyr_1322	0.22	+0.1
1,500,234	-		Psyr_1322	0.22	-1.7
1,500,760	+		Psyr_1322	0.83	-0.7
1,500,760	+		Psyr_1322	0.83	+0.2
1,500,761	-		Psyr_1322	0.83	-0.0
1,500,761	-		Psyr_1322	0.83	+1.4
1,500,761	-		Psyr_1322	0.83	-0.7
1,500,956	+				+1.9
1,500,990	+				-0.3
1,501,056	+				+0.4
1,501,056	+				-0.1
1,501,056	+				-0.6
1,501,056	+				+0.4
1,501,056	+				-1.6
1,501,057	-				-0.9
1,501,178	+		Psyr_1323	0.20	+1.5
1,501,178	+		Psyr_1323	0.20	+2.0
1,501,178	+		Psyr_1323	0.20	-1.4
1,501,377	+		Psyr_1323	0.49	+0.2
1,501,377	+		Psyr_1323	0.49	-1.4
1,501,378	-		Psyr_1323	0.49	-0.6
1,501,471	+		Psyr_1323	0.62	+1.7
1,501,471	+		Psyr_1323	0.62	+0.3
1,501,472	-		Psyr_1323	0.63	-2.0
1,501,472	-		Psyr_1323	0.63	-0.9
1,501,472	-		Psyr_1323	0.63	-0.4
1,501,472	-		Psyr_1323	0.63	+1.2
1,501,475	+		Psyr_1323	0.63	+0.4
1,501,475	+		Psyr_1323	0.63	+0.8
1,501,475	+		Psyr_1323	0.63	-0.1
1,501,475	+		Psyr_1323	0.63	-1.1
1,501,475	+		Psyr_1323	0.63	+1.1
1,501,475	+		Psyr_1323	0.63	+0.1
1,501,475	+		Psyr_1323	0.63	+1.3
1,501,475	+		Psyr_1323	0.63	+0.9
1,501,475	+		Psyr_1323	0.63	+2.2
1,501,476	-		Psyr_1323	0.63	-0.2
1,501,476	-		Psyr_1323	0.63	+0.4
1,501,476	-		Psyr_1323	0.63	+0.6
1,501,476	-		Psyr_1323	0.63	-1.9
1,501,476	-		Psyr_1323	0.63	+1.0
1,501,476	-		Psyr_1323	0.63	-0.2
1,501,476	-		Psyr_1323	0.63	+0.0
1,501,476	-		Psyr_1323	0.63	-1.6
1,501,572	+		Psyr_1323	0.77	-2.3
1,501,572	+		Psyr_1323	0.77	+1.4
1,501,572	+		Psyr_1323	0.77	-0.4
1,501,668	-				-1.7
1,501,668	-				+0.0
1,501,728	-				-0.4
1,501,767	+				+1.1
1,501,768	-				-0.6