Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1012

Experiment: KB with Carbenicillin 3.1 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Carbenicillin 3.1 ug/ml
1,145,209	-		Psyr_1011	0.12	-1.3
1,145,246	+		Psyr_1011	0.15	+0.2
1,145,258	+		Psyr_1011	0.16	+0.2
1,145,772	+		Psyr_1011	0.62	+2.0
1,145,772	+		Psyr_1011	0.62	-0.4
1,145,773	-		Psyr_1011	0.63	-0.3
1,145,773	-		Psyr_1011	0.63	+0.9
1,145,773	-		Psyr_1011	0.63	-1.9
1,145,773	-		Psyr_1011	0.63	+0.3
1,145,846	+		Psyr_1011	0.69	-0.5
1,145,949	-		Psyr_1011	0.79	+0.3
1,145,949	-		Psyr_1011	0.79	+0.1
1,145,949	-		Psyr_1011	0.79	-0.1
1,146,430	-		Psyr_1012	0.23	-2.0
1,146,537	+		Psyr_1012	0.31	-2.4
1,146,537	+		Psyr_1012	0.31	-2.0
1,146,538	-		Psyr_1012	0.31	-0.8
1,146,551	+		Psyr_1012	0.33	+0.6
1,146,551	+		Psyr_1012	0.33	-1.1
1,146,552	-		Psyr_1012	0.33	+1.3
1,146,552	-		Psyr_1012	0.33	+0.5
1,146,664	-		Psyr_1012	0.42	+0.3
1,146,664	-		Psyr_1012	0.42	-0.1
1,146,664	-		Psyr_1012	0.42	-0.9
1,146,944	+		Psyr_1012	0.65	-0.3
1,146,944	+		Psyr_1012	0.65	-1.3
1,146,945	-		Psyr_1012	0.65	-2.1
1,146,951	+		Psyr_1012	0.65	+0.7
1,146,952	-		Psyr_1012	0.65	+0.2
1,146,952	-		Psyr_1012	0.65	-0.4
1,146,990	+		Psyr_1012	0.68	+0.4
1,146,990	+		Psyr_1012	0.68	-0.5
1,146,991	-		Psyr_1012	0.69	-2.2
1,146,991	-		Psyr_1012	0.69	+1.2
1,146,991	-		Psyr_1012	0.69	+0.3
1,146,991	-		Psyr_1012	0.69	-0.4
1,146,991	-		Psyr_1012	0.69	-1.0
1,146,993	-		Psyr_1012	0.69	-0.1
1,146,993	-		Psyr_1012	0.69	+0.1
1,147,091	+		Psyr_1012	0.77	+0.4
1,147,091	+		Psyr_1012	0.77	+1.3
1,147,091	+		Psyr_1012	0.77	-1.0
1,147,092	-		Psyr_1012	0.77	-1.7
1,147,092	-		Psyr_1012	0.77	-0.4
1,147,092	-		Psyr_1012	0.77	-1.2
1,147,092	-		Psyr_1012	0.77	+0.1
1,147,092	-		Psyr_1012	0.77	+1.5
1,147,092	-		Psyr_1012	0.77	+0.0
1,147,333	-				-0.9
1,147,395	-				-2.5
1,147,434	+				-0.4
1,147,446	-				+1.0
1,147,479	+				-1.6
1,147,483	+				-1.9
1,147,484	-				-2.9
1,147,484	-				-2.7
1,147,486	+				+1.3
1,147,486	+				+0.6
1,147,487	-				-0.3
1,147,487	-				+0.1
1,147,487	-				+0.3
1,147,487	-				+0.6
1,147,487	-				-2.3
1,147,487	-				+0.9
1,147,491	-				+1.9
1,147,498	+				-2.5
1,147,506	-				-1.2
1,147,506	-				-1.5
1,147,506	-				+1.3
1,147,525	+				-0.3
1,147,540	+				-1.7
1,147,540	+				+0.6
1,147,541	-				-1.0
1,147,596	+		Psyr_1013	0.13	-0.3
1,147,903	+				+0.3
1,147,904	-				-2.4
1,147,904	-				+0.3
1,147,921	+				+0.3
1,147,939	+				-0.2
1,147,939	+				+0.7
1,147,940	-				+0.6
1,147,957	+				+0.3
1,147,957	+				+0.6
1,147,957	+				+0.8
1,147,958	-				-0.7
1,147,977	+				-0.7
1,147,978	-				-0.8
1,147,984	-				+0.2
1,148,054	-				+0.2
1,148,055	+				+0.1
1,148,055	+				-0.1
1,148,057	+				+0.6
1,148,057	+				+2.0
1,148,057	+				+0.9
1,148,058	-				+0.6
1,148,058	-				+1.6
1,148,080	+				+0.2
1,148,080	+				+1.8
1,148,080	+				-1.3
1,148,082	+				+1.1
1,148,082	+				+1.0
1,148,082	+				-1.0
1,148,082	+				+0.7
1,148,082	+				+0.8
1,148,082	+				+1.3
1,148,082	+				+0.3
1,148,082	+				+0.6
1,148,083	-				+0.8
1,148,083	-				-1.0
1,148,083	-				+0.3
1,148,083	-				-0.1
1,148,083	-				+0.3
1,148,083	-				-2.4
1,148,083	-				-0.9
1,148,084	+				+0.9
1,148,085	-				-1.7
1,148,085	-				-2.9
1,148,090	+				+0.3
1,148,128	+				-0.5
1,148,162	-				-2.8
1,148,317	-		Psyr_1014	0.36	+1.8