Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS24180 and PFLU_RS24185 are separated by 305 nucleotides PFLU_RS24185 and PFLU_RS24190 are separated by 4 nucleotides
PFLU_RS24180: PFLU_RS24180 - preprotein translocase subunit SecA, at 5,410,975 to 5,413,710
_RS24180
PFLU_RS24185: PFLU_RS24185 - DUF721 domain-containing protein, at 5,414,016 to 5,414,471
_RS24185
PFLU_RS24190: PFLU_RS24190 - DUF853 family protein, at 5,414,476 to 5,415,954
_RS24190
Position (kb) 5414
5415 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5413.733 kb on - strand at 5413.733 kb on - strand at 5413.828 kb on + strand at 5413.868 kb on + strand at 5413.966 kb on - strand at 5413.981 kb on + strand at 5413.982 kb on - strand at 5413.998 kb on + strand at 5413.998 kb on + strand at 5413.999 kb on - strand at 5414.003 kb on + strand at 5414.003 kb on + strand at 5414.003 kb on + strand at 5414.003 kb on + strand at 5414.003 kb on + strand at 5414.004 kb on - strand at 5414.004 kb on - strand at 5414.004 kb on - strand at 5414.004 kb on - strand at 5414.004 kb on - strand at 5414.004 kb on - strand at 5414.014 kb on + strand at 5414.015 kb on - strand at 5414.477 kb on + strand at 5414.477 kb on + strand at 5414.478 kb on - strand at 5414.720 kb on + strand, within PFLU_RS24190 at 5414.721 kb on - strand, within PFLU_RS24190 at 5414.988 kb on + strand, within PFLU_RS24190 at 5415.011 kb on - strand, within PFLU_RS24190 at 5415.011 kb on - strand, within PFLU_RS24190 at 5415.050 kb on + strand, within PFLU_RS24190 at 5415.050 kb on + strand, within PFLU_RS24190 at 5415.050 kb on + strand, within PFLU_RS24190 at 5415.050 kb on + strand, within PFLU_RS24190 at 5415.050 kb on + strand, within PFLU_RS24190 at 5415.085 kb on + strand, within PFLU_RS24190 at 5415.085 kb on + strand, within PFLU_RS24190 at 5415.085 kb on + strand, within PFLU_RS24190 at 5415.085 kb on + strand, within PFLU_RS24190 at 5415.086 kb on - strand, within PFLU_RS24190 at 5415.086 kb on - strand, within PFLU_RS24190 at 5415.086 kb on - strand, within PFLU_RS24190 at 5415.086 kb on - strand, within PFLU_RS24190 at 5415.086 kb on - strand, within PFLU_RS24190 at 5415.086 kb on - strand, within PFLU_RS24190 at 5415.239 kb on + strand, within PFLU_RS24190 at 5415.239 kb on + strand, within PFLU_RS24190 at 5415.240 kb on - strand, within PFLU_RS24190 at 5415.240 kb on - strand, within PFLU_RS24190 at 5415.240 kb on - strand, within PFLU_RS24190 at 5415.321 kb on + strand, within PFLU_RS24190 at 5415.321 kb on + strand, within PFLU_RS24190 at 5415.321 kb on + strand, within PFLU_RS24190 at 5415.321 kb on + strand, within PFLU_RS24190 at 5415.322 kb on - strand, within PFLU_RS24190 at 5415.322 kb on - strand, within PFLU_RS24190 at 5415.322 kb on - strand, within PFLU_RS24190 at 5415.322 kb on - strand, within PFLU_RS24190 at 5415.322 kb on - strand, within PFLU_RS24190 at 5415.322 kb on - strand, within PFLU_RS24190 at 5415.459 kb on - strand, within PFLU_RS24190
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 5,413,733 - +0.5 5,413,733 - -3.4 5,413,828 + -0.3 5,413,868 + -2.0 5,413,966 - +0.1 5,413,981 + -0.0 5,413,982 - -1.3 5,413,998 + +0.3 5,413,998 + +0.4 5,413,999 - +0.8 5,414,003 + +0.6 5,414,003 + +0.1 5,414,003 + -0.6 5,414,003 + +0.7 5,414,003 + +0.5 5,414,004 - +0.7 5,414,004 - -1.2 5,414,004 - -1.6 5,414,004 - -0.2 5,414,004 - +1.1 5,414,004 - +1.2 5,414,014 + -0.1 5,414,015 - -0.5 5,414,477 + -0.7 5,414,477 + +0.1 5,414,478 - +1.2 5,414,720 + PFLU_RS24190 0.16 -1.2 5,414,721 - PFLU_RS24190 0.17 +0.3 5,414,988 + PFLU_RS24190 0.35 +0.1 5,415,011 - PFLU_RS24190 0.36 -1.0 5,415,011 - PFLU_RS24190 0.36 -0.1 5,415,050 + PFLU_RS24190 0.39 +1.1 5,415,050 + PFLU_RS24190 0.39 +0.8 5,415,050 + PFLU_RS24190 0.39 -1.0 5,415,050 + PFLU_RS24190 0.39 +0.3 5,415,050 + PFLU_RS24190 0.39 +0.4 5,415,085 + PFLU_RS24190 0.41 -0.1 5,415,085 + PFLU_RS24190 0.41 +1.2 5,415,085 + PFLU_RS24190 0.41 +0.0 5,415,085 + PFLU_RS24190 0.41 +0.4 5,415,086 - PFLU_RS24190 0.41 -1.0 5,415,086 - PFLU_RS24190 0.41 -0.2 5,415,086 - PFLU_RS24190 0.41 -1.0 5,415,086 - PFLU_RS24190 0.41 -0.4 5,415,086 - PFLU_RS24190 0.41 +0.2 5,415,086 - PFLU_RS24190 0.41 +1.5 5,415,239 + PFLU_RS24190 0.52 -0.1 5,415,239 + PFLU_RS24190 0.52 -1.2 5,415,240 - PFLU_RS24190 0.52 +0.2 5,415,240 - PFLU_RS24190 0.52 +1.9 5,415,240 - PFLU_RS24190 0.52 +0.0 5,415,321 + PFLU_RS24190 0.57 +0.7 5,415,321 + PFLU_RS24190 0.57 +0.0 5,415,321 + PFLU_RS24190 0.57 +0.5 5,415,321 + PFLU_RS24190 0.57 +0.5 5,415,322 - PFLU_RS24190 0.57 -0.4 5,415,322 - PFLU_RS24190 0.57 +0.1 5,415,322 - PFLU_RS24190 0.57 -0.1 5,415,322 - PFLU_RS24190 0.57 -2.1 5,415,322 - PFLU_RS24190 0.57 +0.4 5,415,322 - PFLU_RS24190 0.57 -0.5 5,415,459 - PFLU_RS24190 0.66 -0.5
Or see this region's nucleotide sequence