Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07050

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
1,571,417	+		PFLU_RS07035	0.77	+0.5
1,571,418	-		PFLU_RS07035	0.77	-0.4
1,571,426	+		PFLU_RS07035	0.80	+0.4
1,571,435	+		PFLU_RS07035	0.82	-0.9
1,571,452	+		PFLU_RS07035	0.88	+0.1
1,571,452	+		PFLU_RS07035	0.88	+0.7
1,571,535	-				+0.7
1,571,568	+				-2.9
1,571,569	-				-1.5
1,571,653	+		PFLU_RS07040	0.20	+0.9
1,571,653	+		PFLU_RS07040	0.20	-0.2
1,571,653	+		PFLU_RS07040	0.20	-0.8
1,571,653	+		PFLU_RS07040	0.20	+0.5
1,571,653	+		PFLU_RS07040	0.20	+1.7
1,571,653	+		PFLU_RS07040	0.20	+2.2
1,571,653	+		PFLU_RS07040	0.20	+1.5
1,571,653	+		PFLU_RS07040	0.20	+0.5
1,571,653	+		PFLU_RS07040	0.20	+1.3
1,571,653	+		PFLU_RS07040	0.20	+0.4
1,571,653	+		PFLU_RS07040	0.20	+1.9
1,571,653	+		PFLU_RS07040	0.20	+0.6
1,571,654	-		PFLU_RS07040	0.20	-0.2
1,571,654	-		PFLU_RS07040	0.20	-0.2
1,571,719	+		PFLU_RS07040	0.36	-0.6
1,571,719	+		PFLU_RS07040	0.36	+0.2
1,571,742	+		PFLU_RS07040	0.42	+0.6
1,571,764	+		PFLU_RS07040	0.47	-0.1
1,571,765	-		PFLU_RS07040	0.47	+2.4
1,571,784	+		PFLU_RS07040	0.52	-0.2
1,571,784	+		PFLU_RS07040	0.52	-0.2
1,571,784	+		PFLU_RS07040	0.52	-0.7
1,571,784	+		PFLU_RS07040	0.52	-2.1
1,571,784	+		PFLU_RS07040	0.52	-0.8
1,571,784	+		PFLU_RS07040	0.52	+1.4
1,571,784	+		PFLU_RS07040	0.52	+0.7
1,571,784	+		PFLU_RS07040	0.52	-1.2
1,571,784	+		PFLU_RS07040	0.52	+0.5
1,571,784	+		PFLU_RS07040	0.52	+0.9
1,571,784	+		PFLU_RS07040	0.52	-0.0
1,571,784	+		PFLU_RS07040	0.52	-1.5
1,571,784	+		PFLU_RS07040	0.52	+0.2
1,571,784	+		PFLU_RS07040	0.52	-2.0
1,571,784	+		PFLU_RS07040	0.52	-0.5
1,571,784	+		PFLU_RS07040	0.52	-0.2
1,571,785	-		PFLU_RS07040	0.52	-0.0
1,571,785	-		PFLU_RS07040	0.52	+1.8
1,571,785	-		PFLU_RS07040	0.52	-2.0
1,571,785	-		PFLU_RS07040	0.52	-1.2
1,571,785	-		PFLU_RS07040	0.52	+0.2
1,571,785	-		PFLU_RS07040	0.52	-0.4
1,571,785	-		PFLU_RS07040	0.52	-0.0
1,571,785	-		PFLU_RS07040	0.52	-0.2
1,571,785	-		PFLU_RS07040	0.52	+2.1
1,571,785	-		PFLU_RS07040	0.52	-0.2
1,571,785	-		PFLU_RS07040	0.52	-0.2
1,571,785	-		PFLU_RS07040	0.52	+0.1
1,571,785	-		PFLU_RS07040	0.52	+1.8
1,571,928	+		PFLU_RS07040	0.87	+0.8
1,571,928	+		PFLU_RS07040	0.87	-0.2
1,571,974	+				-0.1
1,572,005	+				+0.5
1,572,005	+				+0.4
1,572,005	+				-0.3
1,572,005	+				+0.5
1,572,005	+				-0.3
1,572,006	-				+0.1
1,572,006	-				+0.7
1,572,006	-				+1.5
1,572,006	-				+1.5
1,572,127	+		PFLU_RS07045	0.67	-0.3
1,572,127	+		PFLU_RS07045	0.67	-1.0
1,572,127	+		PFLU_RS07045	0.67	+0.6
1,572,128	-		PFLU_RS07045	0.68	+0.1
1,572,128	-		PFLU_RS07045	0.68	+1.0
1,572,128	-		PFLU_RS07045	0.68	+1.3
1,572,141	-		PFLU_RS07045	0.75	-0.5
1,572,141	-		PFLU_RS07045	0.75	+1.5
1,572,167	-		PFLU_RS07045	0.89	-0.3
1,572,174	-				+0.8
1,572,174	-				+0.8
1,572,174	-				+0.4
1,572,174	-				+0.2
1,572,174	-				-0.1
1,572,181	-				-0.7
1,572,239	+				+0.0
1,572,239	+				+0.6
1,572,240	-				-0.0
1,572,240	-				-1.9
1,572,240	-				+0.7
1,572,245	+				+0.3
1,572,245	+				-0.0
1,572,246	-				+0.9
1,572,246	-				-0.4
1,572,246	-				-0.5
1,572,246	-				+0.6
1,572,250	+				+0.4
1,572,250	+				+0.6
1,572,250	+				+0.4
1,572,251	-				+0.2
1,572,251	-				-1.9
1,572,251	-				-0.4
1,572,251	-				+0.2
1,572,251	-				-2.3
1,572,251	-				-0.5
1,572,251	-				-0.3
1,572,254	+				+0.2
1,572,255	-				+1.0
1,572,255	-				+0.5
1,572,255	-				+0.0
1,572,300	+				+1.1
1,572,300	+				-1.3
1,572,300	+				-0.8
1,572,300	+				-0.2
1,572,300	+				+0.1
1,572,300	+				+0.8
1,572,300	+				+0.7
1,572,301	-				-1.8
1,572,301	-				-0.3
1,572,301	-				+1.4
1,572,301	-				+0.6
1,572,301	-				+0.5
1,572,301	-				-0.1
1,572,301	-				+0.6
1,572,301	-				-0.1
1,572,328	+				-2.7
1,572,329	-				-1.0
1,572,332	+				+1.2
1,572,332	+				-1.0
1,572,332	+				-0.0
1,572,332	+				-0.2
1,572,332	+				+0.3
1,572,333	-				-0.4
1,572,333	-				-0.9
1,572,333	-				+1.6
1,572,333	-				+0.4
1,572,333	-				+0.6
1,572,333	-				-0.5
1,572,333	-				-0.3
1,572,333	-				-2.2
1,572,333	-				+1.1
1,572,363	+				-0.0
1,572,363	+				-0.2
1,572,363	+				+0.4
1,572,364	-				-0.7
1,572,364	-				+0.5
1,572,364	-				-0.3
1,572,364	-				-2.1
1,572,364	-				-0.2
1,572,364	-				+1.0
1,572,367	+				+0.6
1,572,367	+				-0.2
1,572,367	+				-0.0
1,572,367	+				+1.6
1,572,367	+				+0.5
1,572,367	+				-0.2
1,572,367	+				+2.1
1,572,367	+				-0.1
1,572,367	+				-1.3
1,572,367	+				-0.2
1,572,368	-				-0.7
1,572,368	-				-0.3
1,572,368	-				+0.4
1,572,368	-				+1.3
1,572,368	-				+0.2
1,572,368	-				-0.5
1,572,368	-				+0.5
1,572,368	-				+0.7
1,572,476	+		PFLU_RS07050	0.14	-0.7
1,572,476	+		PFLU_RS07050	0.14	+0.8
1,572,476	+		PFLU_RS07050	0.14	-1.2
1,572,476	+		PFLU_RS07050	0.14	+1.2
1,572,476	+		PFLU_RS07050	0.14	+0.7
1,572,476	+		PFLU_RS07050	0.14	-0.3
1,572,476	+		PFLU_RS07050	0.14	+0.5
1,572,476	+		PFLU_RS07050	0.14	+0.5
1,572,476	+		PFLU_RS07050	0.14	+0.7
1,572,476	+		PFLU_RS07050	0.14	-0.6
1,572,476	+		PFLU_RS07050	0.14	-0.8
1,572,476	+		PFLU_RS07050	0.14	+2.5
1,572,476	+		PFLU_RS07050	0.14	-1.4
1,572,477	-		PFLU_RS07050	0.14	-1.9
1,572,477	-		PFLU_RS07050	0.14	+0.9
1,572,477	-		PFLU_RS07050	0.14	-1.0
1,572,477	-		PFLU_RS07050	0.14	+0.5
1,572,477	-		PFLU_RS07050	0.14	-0.4
1,572,477	-		PFLU_RS07050	0.14	+0.5
1,572,489	+		PFLU_RS07050	0.15	+0.8
1,572,490	-		PFLU_RS07050	0.15	-1.0
1,572,490	-		PFLU_RS07050	0.15	+0.4
1,572,490	-		PFLU_RS07050	0.15	+2.3
1,572,518	-		PFLU_RS07050	0.18	+0.8
1,572,614	+		PFLU_RS07050	0.29	+1.2
1,572,796	+		PFLU_RS07050	0.49	-0.6
1,572,797	-		PFLU_RS07050	0.49	-1.1
1,572,956	+		PFLU_RS07050	0.67	-0.2
1,572,956	+		PFLU_RS07050	0.67	+0.5
1,572,957	-		PFLU_RS07050	0.67	-1.8
1,572,957	-		PFLU_RS07050	0.67	-0.3
1,572,957	-		PFLU_RS07050	0.67	+0.3
1,573,047	-		PFLU_RS07050	0.77	+0.6
1,573,224	-				-0.6
1,573,224	-				-0.1
1,573,237	+				+2.1
1,573,237	+				+0.7
1,573,237	+				-1.6
1,573,238	-				+0.2
1,573,238	-				-0.2
1,573,238	-				+0.2
1,573,238	-				-0.9
1,573,310	+				-0.8
1,573,310	+				+0.0
1,573,310	+				+0.1
1,573,310	+				-0.6
1,573,310	+				+0.8
1,573,310	+				+0.3
1,573,310	+				+0.1
1,573,310	+				-0.2
1,573,310	+				-1.3
1,573,310	+				-0.1
1,573,310	+				+0.3
1,573,310	+				-0.3
1,573,310	+				+0.9
1,573,311	-				-0.7
1,573,311	-				-2.3
1,573,311	-				-1.0
1,573,311	-				-3.0
1,573,311	-				-0.8
1,573,311	-				+0.1
1,573,311	-				-0.1
1,573,311	-				-1.5
1,573,311	-				-1.3
1,573,311	-				-1.2
1,573,311	-				-0.7
1,573,328	+				-0.4
1,573,413	+				+0.1
1,573,413	+				-0.4
1,573,414	-				+0.2
1,573,414	-				+0.3
1,573,484	+		PFLU_RS07055	0.12	-0.3
1,573,485	-		PFLU_RS07055	0.12	+0.9
1,573,614	+		PFLU_RS07055	0.23	+1.0
1,573,614	+		PFLU_RS07055	0.23	-0.9
1,573,615	-		PFLU_RS07055	0.23	-0.1
1,573,661	+		PFLU_RS07055	0.27	+0.3
1,573,661	+		PFLU_RS07055	0.27	-0.6
1,573,661	+		PFLU_RS07055	0.27	+0.5
1,573,661	+		PFLU_RS07055	0.27	-0.2
1,573,661	+		PFLU_RS07055	0.27	+0.8
1,573,661	+		PFLU_RS07055	0.27	+0.9
1,573,661	+		PFLU_RS07055	0.27	+0.4
1,573,661	+		PFLU_RS07055	0.27	-1.0
1,573,661	+		PFLU_RS07055	0.27	+0.4
1,573,661	+		PFLU_RS07055	0.27	+0.7
1,573,661	+		PFLU_RS07055	0.27	-0.4
1,573,661	+		PFLU_RS07055	0.27	-0.6
1,573,661	+		PFLU_RS07055	0.27	-0.2
1,573,661	+		PFLU_RS07055	0.27	-2.3
1,573,661	+		PFLU_RS07055	0.27	-0.8
1,573,661	+		PFLU_RS07055	0.27	+0.9
1,573,661	+		PFLU_RS07055	0.27	+0.5
1,573,662	-		PFLU_RS07055	0.27	+0.0
1,573,662	-		PFLU_RS07055	0.27	+0.0
1,573,662	-		PFLU_RS07055	0.27	-0.6
1,573,662	-		PFLU_RS07055	0.27	+0.3
1,573,662	-		PFLU_RS07055	0.27	-2.5
1,573,662	-		PFLU_RS07055	0.27	+0.2
1,573,662	-		PFLU_RS07055	0.27	-0.4
1,573,662	-		PFLU_RS07055	0.27	-3.0
1,573,662	-		PFLU_RS07055	0.27	-0.6
1,573,662	-		PFLU_RS07055	0.27	-0.1
1,573,662	-		PFLU_RS07055	0.27	-0.4
1,573,662	-		PFLU_RS07055	0.27	+1.1
1,573,662	-		PFLU_RS07055	0.27	+0.2
1,573,662	-		PFLU_RS07055	0.27	+0.3
1,573,662	-		PFLU_RS07055	0.27	-1.4
1,573,698	+		PFLU_RS07055	0.30	+0.6
1,573,698	+		PFLU_RS07055	0.30	+2.4
1,573,698	+		PFLU_RS07055	0.30	-0.8
1,573,698	+		PFLU_RS07055	0.30	-0.9
1,573,698	+		PFLU_RS07055	0.30	+1.0
1,573,698	+		PFLU_RS07055	0.30	+0.6
1,573,699	-		PFLU_RS07055	0.30	-0.4
1,573,699	-		PFLU_RS07055	0.30	+0.5
1,573,699	-		PFLU_RS07055	0.30	-0.2
1,573,700	+		PFLU_RS07055	0.31	+1.1
1,573,749	+		PFLU_RS07055	0.35	+0.2
1,573,749	+		PFLU_RS07055	0.35	-0.8
1,573,749	+		PFLU_RS07055	0.35	-0.2
1,573,749	+		PFLU_RS07055	0.35	+0.3
1,573,749	+		PFLU_RS07055	0.35	-0.1
1,573,749	+		PFLU_RS07055	0.35	-0.7
1,573,749	+		PFLU_RS07055	0.35	-1.0
1,573,749	+		PFLU_RS07055	0.35	-1.7
1,573,749	+		PFLU_RS07055	0.35	+0.9
1,573,749	+		PFLU_RS07055	0.35	-0.4
1,573,749	+		PFLU_RS07055	0.35	-0.3
1,573,749	+		PFLU_RS07055	0.35	+0.8
1,573,749	+		PFLU_RS07055	0.35	+1.2
1,573,749	+		PFLU_RS07055	0.35	+0.1
1,573,749	+		PFLU_RS07055	0.35	+0.5
1,573,750	-		PFLU_RS07055	0.35	-0.7
1,573,750	-		PFLU_RS07055	0.35	-2.1
1,573,750	-		PFLU_RS07055	0.35	+1.2
1,573,750	-		PFLU_RS07055	0.35	-0.5
1,573,750	-		PFLU_RS07055	0.35	+1.2
1,573,750	-		PFLU_RS07055	0.35	-2.0
1,573,750	-		PFLU_RS07055	0.35	-0.1
1,573,750	-		PFLU_RS07055	0.35	+0.8
1,573,750	-		PFLU_RS07055	0.35	-0.2
1,573,750	-		PFLU_RS07055	0.35	+1.5
1,573,812	+		PFLU_RS07055	0.40	+0.4
1,573,812	+		PFLU_RS07055	0.40	-2.6
1,573,812	+		PFLU_RS07055	0.40	+1.7
1,573,812	+		PFLU_RS07055	0.40	-0.5
1,573,813	-		PFLU_RS07055	0.40	-0.8
1,573,874	+		PFLU_RS07055	0.46	+1.0
1,573,875	-		PFLU_RS07055	0.46	+2.4
1,573,885	+		PFLU_RS07055	0.46	-0.4
1,573,965	+		PFLU_RS07055	0.53	-0.9
1,573,966	-		PFLU_RS07055	0.53	-0.2
1,573,973	-		PFLU_RS07055	0.54	-1.3
1,573,973	-		PFLU_RS07055	0.54	+1.7
1,574,009	+		PFLU_RS07055	0.57	-0.6
1,574,010	-		PFLU_RS07055	0.57	-2.0
1,574,010	-		PFLU_RS07055	0.57	+1.4
1,574,010	-		PFLU_RS07055	0.57	+1.1
1,574,013	+		PFLU_RS07055	0.57	+0.2
1,574,014	-		PFLU_RS07055	0.58	+0.6
1,574,014	-		PFLU_RS07055	0.58	-0.5
1,574,025	+		PFLU_RS07055	0.59	-0.8
1,574,026	-		PFLU_RS07055	0.59	+0.1
1,574,026	-		PFLU_RS07055	0.59	-0.6
1,574,076	+		PFLU_RS07055	0.63	-0.3
1,574,076	+		PFLU_RS07055	0.63	+0.6
1,574,076	+		PFLU_RS07055	0.63	-0.1
1,574,076	+		PFLU_RS07055	0.63	-1.0
1,574,076	+		PFLU_RS07055	0.63	-1.3
1,574,076	+		PFLU_RS07055	0.63	-1.0
1,574,076	+		PFLU_RS07055	0.63	+0.9
1,574,076	+		PFLU_RS07055	0.63	+0.7
1,574,076	+		PFLU_RS07055	0.63	-0.5
1,574,076	+		PFLU_RS07055	0.63	+0.7
1,574,077	-		PFLU_RS07055	0.63	-1.5
1,574,077	-		PFLU_RS07055	0.63	+0.7
1,574,077	-		PFLU_RS07055	0.63	-1.4
1,574,077	-		PFLU_RS07055	0.63	+0.2
1,574,077	-		PFLU_RS07055	0.63	-0.1
1,574,077	-		PFLU_RS07055	0.63	-0.9
1,574,077	-		PFLU_RS07055	0.63	-0.5
1,574,077	-		PFLU_RS07055	0.63	-0.1
1,574,077	-		PFLU_RS07055	0.63	-0.8
1,574,077	-		PFLU_RS07055	0.63	-0.7
1,574,077	-		PFLU_RS07055	0.63	+0.8
1,574,077	-		PFLU_RS07055	0.63	+1.3
1,574,077	-		PFLU_RS07055	0.63	-0.8
1,574,077	-		PFLU_RS07055	0.63	+0.5
1,574,077	-		PFLU_RS07055	0.63	-0.4
1,574,077	-		PFLU_RS07055	0.63	+0.6
1,574,155	+		PFLU_RS07055	0.70	-0.1
1,574,155	+		PFLU_RS07055	0.70	-0.0
1,574,156	-		PFLU_RS07055	0.70	+1.2
1,574,156	-		PFLU_RS07055	0.70	-0.3
1,574,156	-		PFLU_RS07055	0.70	-2.7