Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS06600

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
1,474,424	+		PFLU_RS06590	0.74	+0.5
1,474,424	+		PFLU_RS06590	0.74	-0.7
1,474,424	+		PFLU_RS06590	0.74	+1.6
1,474,424	+		PFLU_RS06590	0.74	+0.8
1,474,424	+		PFLU_RS06590	0.74	-2.6
1,474,424	+		PFLU_RS06590	0.74	-1.2
1,474,424	+		PFLU_RS06590	0.74	+0.7
1,474,424	+		PFLU_RS06590	0.74	+1.1
1,474,424	+		PFLU_RS06590	0.74	+0.3
1,474,424	+		PFLU_RS06590	0.74	+0.2
1,474,424	+		PFLU_RS06590	0.74	-0.5
1,474,425	-		PFLU_RS06590	0.74	+0.6
1,474,425	-		PFLU_RS06590	0.74	+1.8
1,474,425	-		PFLU_RS06590	0.74	-0.3
1,474,425	-		PFLU_RS06590	0.74	+0.1
1,474,425	-		PFLU_RS06590	0.74	+0.3
1,474,425	-		PFLU_RS06590	0.74	-1.0
1,474,425	-		PFLU_RS06590	0.74	+0.3
1,474,425	-		PFLU_RS06590	0.74	-0.5
1,474,425	-		PFLU_RS06590	0.74	-0.4
1,474,492	-		PFLU_RS06590	0.84	+0.0
1,474,584	+				+2.0
1,474,585	-				+0.3
1,474,600	+				+1.9
1,474,630	+				+0.0
1,474,631	-				+0.5
1,474,697	+				+1.3
1,474,697	+				-0.0
1,474,784	+		PFLU_RS06595	0.15	-0.7
1,474,797	-		PFLU_RS06595	0.17	+0.6
1,474,805	+		PFLU_RS06595	0.18	-2.7
1,474,805	+		PFLU_RS06595	0.18	-0.2
1,474,805	+		PFLU_RS06595	0.18	+1.7
1,474,805	+		PFLU_RS06595	0.18	+0.5
1,474,805	+		PFLU_RS06595	0.18	-0.3
1,474,806	-		PFLU_RS06595	0.18	-0.5
1,474,806	-		PFLU_RS06595	0.18	+0.6
1,474,889	-		PFLU_RS06595	0.32	+0.3
1,474,889	-		PFLU_RS06595	0.32	-0.0
1,474,889	-		PFLU_RS06595	0.32	+1.1
1,474,974	+		PFLU_RS06595	0.46	-0.7
1,474,974	+		PFLU_RS06595	0.46	+1.4
1,474,975	-		PFLU_RS06595	0.47	+0.3
1,474,997	+		PFLU_RS06595	0.50	+0.1
1,474,997	+		PFLU_RS06595	0.50	-0.1
1,474,997	+		PFLU_RS06595	0.50	+1.9
1,474,997	+		PFLU_RS06595	0.50	-0.3
1,474,998	-		PFLU_RS06595	0.50	-0.2
1,475,154	+		PFLU_RS06595	0.76	+0.0
1,475,155	-		PFLU_RS06595	0.77	+0.5
1,475,316	+				+0.2
1,475,317	-				-0.2
1,475,317	-				-1.1
1,475,333	+				-2.1
1,475,333	+				-1.1
1,475,333	+				+0.3
1,475,333	+				+0.8
1,475,333	+				-0.0
1,475,333	+				+0.0
1,475,334	-				+0.2
1,475,334	-				+0.1
1,475,334	-				-1.1
1,475,334	-				+0.3
1,475,334	-				+2.4
1,475,364	-				+0.2
1,475,364	-				+0.4
1,475,440	+				+0.2
1,475,440	+				-0.2
1,475,440	+				+1.0
1,475,440	+				-0.8
1,475,440	+				-0.2
1,475,440	+				+0.0
1,475,440	+				-2.3
1,475,440	+				-0.6
1,475,440	+				-0.0
1,475,441	-				+0.1
1,475,441	-				+0.4
1,475,441	-				+0.5
1,475,539	+		PFLU_RS06600	0.15	+0.4
1,475,539	+		PFLU_RS06600	0.15	+0.9
1,475,539	+		PFLU_RS06600	0.15	+0.4
1,475,540	-		PFLU_RS06600	0.15	+0.3
1,475,657	+		PFLU_RS06600	0.28	-0.2
1,475,657	+		PFLU_RS06600	0.28	+1.2
1,475,657	+		PFLU_RS06600	0.28	-0.2
1,475,658	-		PFLU_RS06600	0.28	+0.0
1,475,658	-		PFLU_RS06600	0.28	-0.6
1,475,684	+		PFLU_RS06600	0.31	-0.1
1,475,684	+		PFLU_RS06600	0.31	+0.6
1,475,685	-		PFLU_RS06600	0.31	+0.3
1,475,685	-		PFLU_RS06600	0.31	+0.9
1,475,827	+		PFLU_RS06600	0.47	-0.3
1,475,827	+		PFLU_RS06600	0.47	-0.2
1,475,828	-		PFLU_RS06600	0.47	+0.4
1,475,828	-		PFLU_RS06600	0.47	+0.4
1,475,911	-		PFLU_RS06600	0.56	+0.3
1,475,922	+		PFLU_RS06600	0.57	-0.7
1,475,922	+		PFLU_RS06600	0.57	-0.3
1,475,923	-		PFLU_RS06600	0.58	-0.4
1,475,923	-		PFLU_RS06600	0.58	+0.1
1,475,923	-		PFLU_RS06600	0.58	-1.2
1,475,923	-		PFLU_RS06600	0.58	+1.9
1,475,960	+		PFLU_RS06600	0.62	+0.5
1,475,960	+		PFLU_RS06600	0.62	-1.8
1,475,960	+		PFLU_RS06600	0.62	+1.1
1,475,961	-		PFLU_RS06600	0.62	-0.8
1,475,961	-		PFLU_RS06600	0.62	-0.5
1,475,961	-		PFLU_RS06600	0.62	+0.3
1,475,982	+		PFLU_RS06600	0.64	+0.6
1,475,983	-		PFLU_RS06600	0.64	-0.6
1,475,983	-		PFLU_RS06600	0.64	+1.1
1,475,983	-		PFLU_RS06600	0.64	+1.3
1,475,983	-		PFLU_RS06600	0.64	-0.1
1,476,006	+		PFLU_RS06600	0.67	+0.1
1,476,006	+		PFLU_RS06600	0.67	+1.7
1,476,006	+		PFLU_RS06600	0.67	-1.2
1,476,006	+		PFLU_RS06600	0.67	+0.3
1,476,006	+		PFLU_RS06600	0.67	-0.1
1,476,006	+		PFLU_RS06600	0.67	-1.5
1,476,006	+		PFLU_RS06600	0.67	+0.7
1,476,006	+		PFLU_RS06600	0.67	+0.3
1,476,007	-		PFLU_RS06600	0.67	-0.1
1,476,007	-		PFLU_RS06600	0.67	+0.9
1,476,066	+		PFLU_RS06600	0.73	-0.8
1,476,066	+		PFLU_RS06600	0.73	+0.3
1,476,066	+		PFLU_RS06600	0.73	-0.3
1,476,066	+		PFLU_RS06600	0.73	+0.7
1,476,066	+		PFLU_RS06600	0.73	-0.5
1,476,066	+		PFLU_RS06600	0.73	+0.7
1,476,066	+		PFLU_RS06600	0.73	-0.2
1,476,067	-		PFLU_RS06600	0.73	+0.6
1,476,067	-		PFLU_RS06600	0.73	+0.2
1,476,067	-		PFLU_RS06600	0.73	+0.3
1,476,123	+		PFLU_RS06600	0.80	+0.7
1,476,123	+		PFLU_RS06600	0.80	+1.5
1,476,123	+		PFLU_RS06600	0.80	-0.3
1,476,123	+		PFLU_RS06600	0.80	-2.2
1,476,123	+		PFLU_RS06600	0.80	-0.6
1,476,123	+		PFLU_RS06600	0.80	-0.1
1,476,123	+		PFLU_RS06600	0.80	+0.1
1,476,123	+		PFLU_RS06600	0.80	-0.6
1,476,123	+		PFLU_RS06600	0.80	+1.0
1,476,123	+		PFLU_RS06600	0.80	-1.8
1,476,123	+		PFLU_RS06600	0.80	-0.4
1,476,123	+		PFLU_RS06600	0.80	-0.3
1,476,123	+		PFLU_RS06600	0.80	+0.1
1,476,123	+		PFLU_RS06600	0.80	+1.1
1,476,123	+		PFLU_RS06600	0.80	-1.5
1,476,123	+		PFLU_RS06600	0.80	+0.3
1,476,123	+		PFLU_RS06600	0.80	+0.1
1,476,123	+		PFLU_RS06600	0.80	-0.1
1,476,123	+		PFLU_RS06600	0.80	+0.3
1,476,123	+		PFLU_RS06600	0.80	-1.7
1,476,123	+		PFLU_RS06600	0.80	-0.6
1,476,123	+		PFLU_RS06600	0.80	-0.3
1,476,123	+		PFLU_RS06600	0.80	+0.2
1,476,123	+		PFLU_RS06600	0.80	+0.5
1,476,123	+		PFLU_RS06600	0.80	+0.4
1,476,123	+		PFLU_RS06600	0.80	+1.9
1,476,123	+		PFLU_RS06600	0.80	-1.3
1,476,123	+		PFLU_RS06600	0.80	+2.3
1,476,123	+		PFLU_RS06600	0.80	+0.4
1,476,123	+		PFLU_RS06600	0.80	-0.5
1,476,123	+		PFLU_RS06600	0.80	-1.0
1,476,124	-		PFLU_RS06600	0.80	-1.0
1,476,124	-		PFLU_RS06600	0.80	-0.2
1,476,124	-		PFLU_RS06600	0.80	-1.0
1,476,124	-		PFLU_RS06600	0.80	-0.3
1,476,124	-		PFLU_RS06600	0.80	+1.1
1,476,124	-		PFLU_RS06600	0.80	+0.9
1,476,124	-		PFLU_RS06600	0.80	+0.5
1,476,124	-		PFLU_RS06600	0.80	-1.3
1,476,124	-		PFLU_RS06600	0.80	+0.6
1,476,124	-		PFLU_RS06600	0.80	+1.4
1,476,124	-		PFLU_RS06600	0.80	+1.3
1,476,124	-		PFLU_RS06600	0.80	-1.1
1,476,124	-		PFLU_RS06600	0.80	+0.4
1,476,124	-		PFLU_RS06600	0.80	+1.0
1,476,124	-		PFLU_RS06600	0.80	-1.2
1,476,124	-		PFLU_RS06600	0.80	+0.5
1,476,124	-		PFLU_RS06600	0.80	+0.4
1,476,124	-		PFLU_RS06600	0.80	+0.9
1,476,124	-		PFLU_RS06600	0.80	+0.7
1,476,124	-		PFLU_RS06600	0.80	-0.1
1,476,124	-		PFLU_RS06600	0.80	+0.5
1,476,124	-		PFLU_RS06600	0.80	-0.1
1,476,124	-		PFLU_RS06600	0.80	-1.0
1,476,124	-		PFLU_RS06600	0.80	-0.0
1,476,127	+		PFLU_RS06600	0.80	+0.4
1,476,127	+		PFLU_RS06600	0.80	-0.7
1,476,127	+		PFLU_RS06600	0.80	+0.9
1,476,127	+		PFLU_RS06600	0.80	-2.7
1,476,127	+		PFLU_RS06600	0.80	-0.4
1,476,127	+		PFLU_RS06600	0.80	-0.0
1,476,128	-		PFLU_RS06600	0.80	+0.1
1,476,128	-		PFLU_RS06600	0.80	-0.7
1,476,128	-		PFLU_RS06600	0.80	+0.9
1,476,128	-		PFLU_RS06600	0.80	-1.4
1,476,128	-		PFLU_RS06600	0.80	-0.1
1,476,128	-		PFLU_RS06600	0.80	+0.4
1,476,128	-		PFLU_RS06600	0.80	-0.1
1,476,128	-		PFLU_RS06600	0.80	+0.7
1,476,178	-		PFLU_RS06600	0.86	+2.4
1,476,201	+		PFLU_RS06600	0.88	-1.2
1,476,201	+		PFLU_RS06600	0.88	-2.6
1,476,201	+		PFLU_RS06600	0.88	+0.6
1,476,201	+		PFLU_RS06600	0.88	+0.6
1,476,201	+		PFLU_RS06600	0.88	+1.0
1,476,201	+		PFLU_RS06600	0.88	+1.3
1,476,201	+		PFLU_RS06600	0.88	+0.4
1,476,201	+		PFLU_RS06600	0.88	+0.7
1,476,202	-		PFLU_RS06600	0.88	+0.4
1,476,258	+				-0.2
1,476,258	+				-0.2
1,476,306	+				+0.6
1,476,307	-				-0.0
1,476,372	-		PFLU_RS06605	0.14	+0.7
1,476,372	-		PFLU_RS06605	0.14	+0.2
1,476,405	+		PFLU_RS06605	0.21	-1.8
1,476,405	+		PFLU_RS06605	0.21	+0.5
1,476,529	+		PFLU_RS06605	0.46	+0.3
1,476,529	+		PFLU_RS06605	0.46	-0.9
1,476,529	+		PFLU_RS06605	0.46	-1.9
1,476,529	+		PFLU_RS06605	0.46	+0.3
1,476,529	+		PFLU_RS06605	0.46	+0.4
1,476,529	+		PFLU_RS06605	0.46	+0.8
1,476,529	+		PFLU_RS06605	0.46	+0.8
1,476,529	+		PFLU_RS06605	0.46	+0.8
1,476,529	+		PFLU_RS06605	0.46	+0.7
1,476,529	+		PFLU_RS06605	0.46	+1.0
1,476,529	+		PFLU_RS06605	0.46	-0.8
1,476,529	+		PFLU_RS06605	0.46	+1.1
1,476,530	-		PFLU_RS06605	0.46	-0.5
1,476,530	-		PFLU_RS06605	0.46	+0.8
1,476,530	-		PFLU_RS06605	0.46	+0.9
1,476,530	-		PFLU_RS06605	0.46	-1.1
1,476,530	-		PFLU_RS06605	0.46	-1.7
1,476,530	-		PFLU_RS06605	0.46	+0.3
1,476,530	-		PFLU_RS06605	0.46	-1.4
1,476,530	-		PFLU_RS06605	0.46	-1.1
1,476,530	-		PFLU_RS06605	0.46	+1.3
1,476,530	-		PFLU_RS06605	0.46	-0.5
1,476,530	-		PFLU_RS06605	0.46	+0.3
1,476,567	+		PFLU_RS06605	0.54	+1.5
1,476,568	-		PFLU_RS06605	0.54	+1.0
1,476,629	-		PFLU_RS06605	0.67	+0.7
1,476,771	+				-0.2
1,476,771	+				-1.1
1,476,771	+				+0.3
1,476,771	+				-1.5
1,476,771	+				-0.2
1,476,772	-				+0.4
1,476,772	-				+0.2
1,476,772	-				-0.2
1,476,772	-				-0.0
1,476,772	-				+1.1
1,476,796	+				-1.5
1,476,796	+				+0.7
1,476,808	+				+1.4
1,476,808	+				-0.8
1,476,808	+				+0.3
1,476,808	+				+0.1
1,476,809	-				+0.5
1,476,809	-				+0.1
1,476,809	-				-0.5
1,476,911	-		PFLU_RS06610	0.16	+0.8
1,476,939	+		PFLU_RS06610	0.20	-0.4
1,476,939	+		PFLU_RS06610	0.20	+1.5
1,477,083	-		PFLU_RS06610	0.38	-0.2
1,477,239	+		PFLU_RS06610	0.58	-1.5
1,477,239	+		PFLU_RS06610	0.58	+0.9
1,477,239	+		PFLU_RS06610	0.58	-0.4
1,477,239	+		PFLU_RS06610	0.58	+0.5
1,477,240	-		PFLU_RS06610	0.58	+0.7
1,477,240	-		PFLU_RS06610	0.58	+1.3
1,477,250	+		PFLU_RS06610	0.60	+1.2
1,477,250	+		PFLU_RS06610	0.60	-0.1
1,477,251	-		PFLU_RS06610	0.60	-2.0