Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS02800 and PFLU_RS02805 are separated by 133 nucleotides PFLU_RS02805 and PFLU_RS02810 are separated by 168 nucleotides PFLU_RS02810 and PFLU_RS02815 are separated by 105 nucleotides
PFLU_RS02800: PFLU_RS02800 - AsmA family protein, at 641,618 to 643,687
_RS02800
PFLU_RS02805: PFLU_RS02805 - bacterioferritin, at 643,821 to 644,351
_RS02805
PFLU_RS02810: PFLU_RS02810 - triacylglycerol lipase, at 644,520 to 645,410
_RS02810
PFLU_RS02815: PFLU_RS02815 - DMT family transporter, at 645,516 to 646,391
_RS02815
Position (kb) 644
645
646 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 643.695 kb on + strand at 643.695 kb on + strand at 643.695 kb on + strand at 643.696 kb on - strand at 643.696 kb on - strand at 643.703 kb on + strand at 643.739 kb on + strand at 643.739 kb on + strand at 643.739 kb on + strand at 643.740 kb on - strand at 643.740 kb on - strand at 643.740 kb on - strand at 643.740 kb on - strand at 643.740 kb on - strand at 643.740 kb on - strand at 643.740 kb on - strand at 643.740 kb on - strand at 643.740 kb on - strand at 643.741 kb on + strand at 643.741 kb on + strand at 643.741 kb on + strand at 643.741 kb on + strand at 643.741 kb on + strand at 643.742 kb on - strand at 643.742 kb on - strand at 643.742 kb on - strand at 643.742 kb on - strand at 643.800 kb on + strand at 643.800 kb on + strand at 643.800 kb on + strand at 643.800 kb on + strand at 643.800 kb on + strand at 643.800 kb on + strand at 643.800 kb on + strand at 643.800 kb on + strand at 643.800 kb on + strand at 643.800 kb on + strand at 643.800 kb on + strand at 643.800 kb on + strand at 643.800 kb on + strand at 643.800 kb on + strand at 643.800 kb on + strand at 643.800 kb on + strand at 643.800 kb on + strand at 643.800 kb on + strand at 643.800 kb on + strand at 643.804 kb on + strand at 643.804 kb on + strand at 643.804 kb on + strand at 643.804 kb on + strand at 643.804 kb on + strand at 643.804 kb on + strand at 643.804 kb on + strand at 643.804 kb on + strand at 643.804 kb on + strand at 643.804 kb on + strand at 643.805 kb on - strand at 643.805 kb on - strand at 643.805 kb on - strand at 643.805 kb on - strand at 643.822 kb on + strand at 643.924 kb on + strand, within PFLU_RS02805 at 643.924 kb on + strand, within PFLU_RS02805 at 643.924 kb on + strand, within PFLU_RS02805 at 643.924 kb on + strand, within PFLU_RS02805 at 643.924 kb on + strand, within PFLU_RS02805 at 643.925 kb on - strand, within PFLU_RS02805 at 643.925 kb on - strand, within PFLU_RS02805 at 643.925 kb on - strand, within PFLU_RS02805 at 643.925 kb on - strand, within PFLU_RS02805 at 643.925 kb on - strand, within PFLU_RS02805 at 643.925 kb on - strand, within PFLU_RS02805 at 643.943 kb on - strand, within PFLU_RS02805 at 644.014 kb on + strand, within PFLU_RS02805 at 644.014 kb on + strand, within PFLU_RS02805 at 644.015 kb on - strand, within PFLU_RS02805 at 644.179 kb on + strand, within PFLU_RS02805 at 644.179 kb on + strand, within PFLU_RS02805 at 644.179 kb on + strand, within PFLU_RS02805 at 644.179 kb on + strand, within PFLU_RS02805 at 644.179 kb on + strand, within PFLU_RS02805 at 644.179 kb on + strand, within PFLU_RS02805 at 644.179 kb on + strand, within PFLU_RS02805 at 644.179 kb on + strand, within PFLU_RS02805 at 644.179 kb on + strand, within PFLU_RS02805 at 644.180 kb on - strand, within PFLU_RS02805 at 644.180 kb on - strand, within PFLU_RS02805 at 644.180 kb on - strand, within PFLU_RS02805 at 644.180 kb on - strand, within PFLU_RS02805 at 644.180 kb on - strand, within PFLU_RS02805 at 644.180 kb on - strand, within PFLU_RS02805 at 644.180 kb on - strand, within PFLU_RS02805 at 644.180 kb on - strand, within PFLU_RS02805 at 644.180 kb on - strand, within PFLU_RS02805 at 644.180 kb on - strand, within PFLU_RS02805 at 644.180 kb on - strand, within PFLU_RS02805 at 644.180 kb on - strand, within PFLU_RS02805 at 644.180 kb on - strand, within PFLU_RS02805 at 644.200 kb on - strand, within PFLU_RS02805 at 644.266 kb on + strand, within PFLU_RS02805 at 644.267 kb on - strand, within PFLU_RS02805 at 644.368 kb on + strand at 644.379 kb on + strand at 644.450 kb on + strand at 644.450 kb on + strand at 644.451 kb on - strand at 644.484 kb on + strand at 644.485 kb on - strand at 644.485 kb on - strand at 644.485 kb on - strand at 644.601 kb on + strand at 644.607 kb on + strand at 644.656 kb on + strand, within PFLU_RS02810 at 644.657 kb on - strand, within PFLU_RS02810 at 644.657 kb on - strand, within PFLU_RS02810 at 644.657 kb on - strand, within PFLU_RS02810 at 644.766 kb on - strand, within PFLU_RS02810 at 644.873 kb on + strand, within PFLU_RS02810 at 645.054 kb on + strand, within PFLU_RS02810 at 645.055 kb on - strand, within PFLU_RS02810 at 645.055 kb on - strand, within PFLU_RS02810 at 645.117 kb on + strand, within PFLU_RS02810 at 645.120 kb on + strand, within PFLU_RS02810 at 645.120 kb on + strand, within PFLU_RS02810 at 645.120 kb on + strand, within PFLU_RS02810 at 645.120 kb on + strand, within PFLU_RS02810 at 645.120 kb on + strand, within PFLU_RS02810 at 645.120 kb on + strand, within PFLU_RS02810 at 645.121 kb on - strand, within PFLU_RS02810 at 645.121 kb on - strand, within PFLU_RS02810 at 645.121 kb on - strand, within PFLU_RS02810 at 645.121 kb on - strand, within PFLU_RS02810 at 645.294 kb on + strand, within PFLU_RS02810 at 645.294 kb on + strand, within PFLU_RS02810 at 645.367 kb on + strand at 645.367 kb on + strand at 645.367 kb on + strand at 645.408 kb on + strand at 645.409 kb on - strand at 645.490 kb on + strand at 645.490 kb on + strand at 645.490 kb on + strand at 645.491 kb on - strand at 645.595 kb on + strand at 645.595 kb on + strand at 645.595 kb on + strand at 645.595 kb on + strand at 645.596 kb on - strand at 645.596 kb on - strand at 645.596 kb on - strand at 645.596 kb on - strand at 645.596 kb on - strand at 645.596 kb on - strand at 645.596 kb on - strand at 645.596 kb on - strand at 645.748 kb on + strand, within PFLU_RS02815 at 645.748 kb on + strand, within PFLU_RS02815 at 645.748 kb on + strand, within PFLU_RS02815 at 645.748 kb on + strand, within PFLU_RS02815 at 645.748 kb on + strand, within PFLU_RS02815 at 645.748 kb on + strand, within PFLU_RS02815 at 645.748 kb on + strand, within PFLU_RS02815 at 645.748 kb on + strand, within PFLU_RS02815 at 645.748 kb on + strand, within PFLU_RS02815 at 645.748 kb on + strand, within PFLU_RS02815 at 645.748 kb on + strand, within PFLU_RS02815 at 645.748 kb on + strand, within PFLU_RS02815 at 645.749 kb on - strand, within PFLU_RS02815 at 645.749 kb on - strand, within PFLU_RS02815 at 645.749 kb on - strand, within PFLU_RS02815 at 645.749 kb on - strand, within PFLU_RS02815 at 645.749 kb on - strand, within PFLU_RS02815 at 645.749 kb on - strand, within PFLU_RS02815 at 645.749 kb on - strand, within PFLU_RS02815 at 645.834 kb on + strand, within PFLU_RS02815 at 645.834 kb on + strand, within PFLU_RS02815 at 645.835 kb on - strand, within PFLU_RS02815 at 645.840 kb on + strand, within PFLU_RS02815 at 645.840 kb on + strand, within PFLU_RS02815 at 645.840 kb on + strand, within PFLU_RS02815 at 645.840 kb on + strand, within PFLU_RS02815 at 645.840 kb on + strand, within PFLU_RS02815 at 645.840 kb on + strand, within PFLU_RS02815 at 645.840 kb on + strand, within PFLU_RS02815 at 645.841 kb on - strand, within PFLU_RS02815 at 645.841 kb on - strand, within PFLU_RS02815 at 645.841 kb on - strand, within PFLU_RS02815 at 645.841 kb on - strand, within PFLU_RS02815 at 645.841 kb on - strand, within PFLU_RS02815 at 645.841 kb on - strand, within PFLU_RS02815 at 645.841 kb on - strand, within PFLU_RS02815 at 645.844 kb on + strand, within PFLU_RS02815 at 645.844 kb on + strand, within PFLU_RS02815 at 645.844 kb on + strand, within PFLU_RS02815 at 645.844 kb on + strand, within PFLU_RS02815 at 645.845 kb on - strand, within PFLU_RS02815 at 645.845 kb on - strand, within PFLU_RS02815 at 645.845 kb on - strand, within PFLU_RS02815 at 645.845 kb on - strand, within PFLU_RS02815 at 645.845 kb on - strand, within PFLU_RS02815 at 645.898 kb on + strand, within PFLU_RS02815 at 645.898 kb on + strand, within PFLU_RS02815 at 645.899 kb on - strand, within PFLU_RS02815 at 645.899 kb on - strand, within PFLU_RS02815 at 645.907 kb on + strand, within PFLU_RS02815 at 645.907 kb on + strand, within PFLU_RS02815 at 645.908 kb on - strand, within PFLU_RS02815 at 646.039 kb on + strand, within PFLU_RS02815 at 646.039 kb on + strand, within PFLU_RS02815 at 646.040 kb on - strand, within PFLU_RS02815 at 646.144 kb on + strand, within PFLU_RS02815 at 646.144 kb on + strand, within PFLU_RS02815 at 646.144 kb on + strand, within PFLU_RS02815 at 646.145 kb on - strand, within PFLU_RS02815 at 646.147 kb on + strand, within PFLU_RS02815 at 646.147 kb on + strand, within PFLU_RS02815 at 646.147 kb on + strand, within PFLU_RS02815 at 646.147 kb on + strand, within PFLU_RS02815 at 646.147 kb on + strand, within PFLU_RS02815 at 646.148 kb on - strand, within PFLU_RS02815 at 646.148 kb on - strand, within PFLU_RS02815 at 646.162 kb on + strand, within PFLU_RS02815 at 646.162 kb on + strand, within PFLU_RS02815 at 646.163 kb on - strand, within PFLU_RS02815 at 646.163 kb on - strand, within PFLU_RS02815 at 646.163 kb on - strand, within PFLU_RS02815 at 646.179 kb on + strand, within PFLU_RS02815 at 646.179 kb on + strand, within PFLU_RS02815 at 646.259 kb on + strand, within PFLU_RS02815 at 646.289 kb on - strand, within PFLU_RS02815 at 646.378 kb on + strand at 646.384 kb on + strand at 646.384 kb on + strand at 646.384 kb on + strand at 646.384 kb on + strand at 646.384 kb on + strand at 646.385 kb on - strand at 646.385 kb on - strand at 646.385 kb on - strand at 646.385 kb on - strand at 646.385 kb on - strand at 646.410 kb on + strand at 646.410 kb on + strand at 646.410 kb on + strand at 646.410 kb on + strand at 646.410 kb on + strand at 646.410 kb on + strand at 646.410 kb on + strand at 646.410 kb on + strand at 646.410 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 643,695 + +0.4 643,695 + +0.2 643,695 + +1.2 643,696 - -0.3 643,696 - -0.8 643,703 + +1.5 643,739 + -1.5 643,739 + -0.3 643,739 + +0.5 643,740 - -0.5 643,740 - +1.4 643,740 - -0.5 643,740 - -0.0 643,740 - -0.5 643,740 - +0.8 643,740 - +0.8 643,740 - +1.9 643,740 - -2.5 643,741 + -1.2 643,741 + -0.5 643,741 + +0.3 643,741 + +0.5 643,741 + -1.4 643,742 - -0.1 643,742 - +0.4 643,742 - -0.6 643,742 - +0.3 643,800 + -0.8 643,800 + -1.7 643,800 + +0.2 643,800 + +0.2 643,800 + +1.9 643,800 + +0.2 643,800 + +0.6 643,800 + +1.6 643,800 + +0.7 643,800 + -0.9 643,800 + -2.1 643,800 + +0.2 643,800 + -0.3 643,800 + +0.8 643,800 + -0.3 643,800 + +0.8 643,800 + +0.2 643,800 + -2.4 643,800 + +0.9 643,804 + +0.9 643,804 + -1.7 643,804 + +1.0 643,804 + +0.1 643,804 + +0.7 643,804 + -0.6 643,804 + +1.3 643,804 + +0.4 643,804 + +0.5 643,804 + +1.2 643,805 - -1.7 643,805 - -0.7 643,805 - -1.0 643,805 - -1.3 643,822 + -0.5 643,924 + PFLU_RS02805 0.19 -1.2 643,924 + PFLU_RS02805 0.19 +0.2 643,924 + PFLU_RS02805 0.19 -1.3 643,924 + PFLU_RS02805 0.19 +1.0 643,924 + PFLU_RS02805 0.19 +0.3 643,925 - PFLU_RS02805 0.20 -0.5 643,925 - PFLU_RS02805 0.20 -1.3 643,925 - PFLU_RS02805 0.20 -0.3 643,925 - PFLU_RS02805 0.20 -1.0 643,925 - PFLU_RS02805 0.20 -0.1 643,925 - PFLU_RS02805 0.20 +0.0 643,943 - PFLU_RS02805 0.23 +0.7 644,014 + PFLU_RS02805 0.36 +0.1 644,014 + PFLU_RS02805 0.36 +0.3 644,015 - PFLU_RS02805 0.37 +1.1 644,179 + PFLU_RS02805 0.67 -0.2 644,179 + PFLU_RS02805 0.67 +0.4 644,179 + PFLU_RS02805 0.67 -1.0 644,179 + PFLU_RS02805 0.67 -0.3 644,179 + PFLU_RS02805 0.67 -0.1 644,179 + PFLU_RS02805 0.67 +1.2 644,179 + PFLU_RS02805 0.67 +0.4 644,179 + PFLU_RS02805 0.67 -0.3 644,179 + PFLU_RS02805 0.67 -0.9 644,180 - PFLU_RS02805 0.68 +1.1 644,180 - PFLU_RS02805 0.68 -1.4 644,180 - PFLU_RS02805 0.68 +0.4 644,180 - PFLU_RS02805 0.68 +0.5 644,180 - PFLU_RS02805 0.68 +0.8 644,180 - PFLU_RS02805 0.68 -0.8 644,180 - PFLU_RS02805 0.68 +0.2 644,180 - PFLU_RS02805 0.68 -0.6 644,180 - PFLU_RS02805 0.68 -0.2 644,180 - PFLU_RS02805 0.68 +0.2 644,180 - PFLU_RS02805 0.68 +1.2 644,180 - PFLU_RS02805 0.68 -0.3 644,180 - PFLU_RS02805 0.68 -0.8 644,200 - PFLU_RS02805 0.71 +0.3 644,266 + PFLU_RS02805 0.84 -0.7 644,267 - PFLU_RS02805 0.84 -1.6 644,368 + -3.6 644,379 + -0.6 644,450 + +0.1 644,450 + -0.4 644,451 - -0.1 644,484 + +0.6 644,485 - +0.6 644,485 - +0.1 644,485 - +0.4 644,601 + +0.7 644,607 + +0.3 644,656 + PFLU_RS02810 0.15 -0.3 644,657 - PFLU_RS02810 0.15 +0.9 644,657 - PFLU_RS02810 0.15 +1.1 644,657 - PFLU_RS02810 0.15 +0.7 644,766 - PFLU_RS02810 0.28 -0.0 644,873 + PFLU_RS02810 0.40 +1.0 645,054 + PFLU_RS02810 0.60 +1.4 645,055 - PFLU_RS02810 0.60 -0.0 645,055 - PFLU_RS02810 0.60 -0.5 645,117 + PFLU_RS02810 0.67 +0.8 645,120 + PFLU_RS02810 0.67 +2.8 645,120 + PFLU_RS02810 0.67 -0.2 645,120 + PFLU_RS02810 0.67 -3.1 645,120 + PFLU_RS02810 0.67 +0.8 645,120 + PFLU_RS02810 0.67 +0.4 645,120 + PFLU_RS02810 0.67 +0.2 645,121 - PFLU_RS02810 0.67 -0.3 645,121 - PFLU_RS02810 0.67 +1.0 645,121 - PFLU_RS02810 0.67 +2.9 645,121 - PFLU_RS02810 0.67 -0.3 645,294 + PFLU_RS02810 0.87 +0.6 645,294 + PFLU_RS02810 0.87 -1.3 645,367 + +0.5 645,367 + -0.7 645,367 + -0.7 645,408 + -0.4 645,409 - -0.8 645,490 + +0.0 645,490 + -1.7 645,490 + +0.1 645,491 - -0.2 645,595 + -0.4 645,595 + +0.1 645,595 + -0.0 645,595 + +0.4 645,596 - +1.7 645,596 - -2.8 645,596 - -1.4 645,596 - +0.3 645,596 - +0.6 645,596 - +0.2 645,596 - -0.3 645,596 - +0.9 645,748 + PFLU_RS02815 0.26 -0.5 645,748 + PFLU_RS02815 0.26 -1.1 645,748 + PFLU_RS02815 0.26 +1.1 645,748 + PFLU_RS02815 0.26 +0.2 645,748 + PFLU_RS02815 0.26 -0.8 645,748 + PFLU_RS02815 0.26 -0.5 645,748 + PFLU_RS02815 0.26 +1.4 645,748 + PFLU_RS02815 0.26 -0.0 645,748 + PFLU_RS02815 0.26 +0.3 645,748 + PFLU_RS02815 0.26 +3.8 645,748 + PFLU_RS02815 0.26 -0.7 645,748 + PFLU_RS02815 0.26 -0.2 645,749 - PFLU_RS02815 0.27 -0.9 645,749 - PFLU_RS02815 0.27 +0.0 645,749 - PFLU_RS02815 0.27 -0.6 645,749 - PFLU_RS02815 0.27 +0.0 645,749 - PFLU_RS02815 0.27 -2.7 645,749 - PFLU_RS02815 0.27 -0.2 645,749 - PFLU_RS02815 0.27 -0.2 645,834 + PFLU_RS02815 0.36 -0.1 645,834 + PFLU_RS02815 0.36 -0.2 645,835 - PFLU_RS02815 0.36 -0.5 645,840 + PFLU_RS02815 0.37 +0.4 645,840 + PFLU_RS02815 0.37 -2.4 645,840 + PFLU_RS02815 0.37 +0.7 645,840 + PFLU_RS02815 0.37 -0.3 645,840 + PFLU_RS02815 0.37 +1.1 645,840 + PFLU_RS02815 0.37 +0.9 645,840 + PFLU_RS02815 0.37 +0.3 645,841 - PFLU_RS02815 0.37 -0.2 645,841 - PFLU_RS02815 0.37 +0.7 645,841 - PFLU_RS02815 0.37 +1.4 645,841 - PFLU_RS02815 0.37 +1.2 645,841 - PFLU_RS02815 0.37 +0.2 645,841 - PFLU_RS02815 0.37 +0.2 645,841 - PFLU_RS02815 0.37 -1.2 645,844 + PFLU_RS02815 0.37 -2.6 645,844 + PFLU_RS02815 0.37 +0.2 645,844 + PFLU_RS02815 0.37 -0.1 645,844 + PFLU_RS02815 0.37 +0.6 645,845 - PFLU_RS02815 0.38 -0.1 645,845 - PFLU_RS02815 0.38 -0.6 645,845 - PFLU_RS02815 0.38 -0.0 645,845 - PFLU_RS02815 0.38 -2.0 645,845 - PFLU_RS02815 0.38 +0.4 645,898 + PFLU_RS02815 0.44 +0.0 645,898 + PFLU_RS02815 0.44 -0.7 645,899 - PFLU_RS02815 0.44 +0.2 645,899 - PFLU_RS02815 0.44 +1.8 645,907 + PFLU_RS02815 0.45 -0.3 645,907 + PFLU_RS02815 0.45 +0.3 645,908 - PFLU_RS02815 0.45 -0.2 646,039 + PFLU_RS02815 0.60 -0.1 646,039 + PFLU_RS02815 0.60 -0.2 646,040 - PFLU_RS02815 0.60 -1.3 646,144 + PFLU_RS02815 0.72 +0.3 646,144 + PFLU_RS02815 0.72 +0.2 646,144 + PFLU_RS02815 0.72 -0.5 646,145 - PFLU_RS02815 0.72 +0.7 646,147 + PFLU_RS02815 0.72 -0.3 646,147 + PFLU_RS02815 0.72 -1.0 646,147 + PFLU_RS02815 0.72 +0.6 646,147 + PFLU_RS02815 0.72 -0.2 646,147 + PFLU_RS02815 0.72 -0.9 646,148 - PFLU_RS02815 0.72 +0.5 646,148 - PFLU_RS02815 0.72 +1.2 646,162 + PFLU_RS02815 0.74 -1.6 646,162 + PFLU_RS02815 0.74 +0.4 646,163 - PFLU_RS02815 0.74 -0.0 646,163 - PFLU_RS02815 0.74 +1.0 646,163 - PFLU_RS02815 0.74 -0.0 646,179 + PFLU_RS02815 0.76 -0.4 646,179 + PFLU_RS02815 0.76 +0.0 646,259 + PFLU_RS02815 0.85 -0.5 646,289 - PFLU_RS02815 0.88 +1.3 646,378 + +0.5 646,384 + +0.3 646,384 + -0.1 646,384 + +0.4 646,384 + -0.1 646,384 + +1.3 646,385 - -0.3 646,385 - +0.6 646,385 - +0.0 646,385 - +2.4 646,385 - +1.2 646,410 + +0.1 646,410 + -0.7 646,410 + -0.2 646,410 + -0.8 646,410 + -0.4 646,410 + +0.4 646,410 + +3.6 646,410 + +0.7 646,410 + +0.9
Or see this region's nucleotide sequence