Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_21310 and OH686_21315 are separated by 11 nucleotides OH686_21315 and OH686_21320 are separated by 29 nucleotides OH686_21320 and OH686_21325 are separated by 155 nucleotides
OH686_21310: OH686_21310 - succinylarginine dihydrolase, at 4,365,829 to 4,367,175
_21310
OH686_21315: OH686_21315 - Putative (G3E family), at 4,367,187 to 4,367,471
_21315
OH686_21320: OH686_21320 - succinylglutamate desuccinylase, at 4,367,501 to 4,368,493
_21320
OH686_21325: OH686_21325 - alanine--tRNA ligase, at 4,368,649 to 4,371,273
_21325
Position (kb)
4367
4368
4369 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4366.534 kb on + strand, within OH686_21310 at 4366.534 kb on + strand, within OH686_21310 at 4366.534 kb on + strand, within OH686_21310 at 4366.534 kb on + strand, within OH686_21310 at 4366.535 kb on - strand, within OH686_21310 at 4366.535 kb on - strand, within OH686_21310 at 4366.535 kb on - strand, within OH686_21310 at 4366.535 kb on - strand, within OH686_21310 at 4366.618 kb on + strand, within OH686_21310 at 4366.618 kb on + strand, within OH686_21310 at 4366.618 kb on + strand, within OH686_21310 at 4366.618 kb on + strand, within OH686_21310 at 4366.619 kb on - strand, within OH686_21310 at 4366.619 kb on - strand, within OH686_21310 at 4366.619 kb on - strand, within OH686_21310 at 4366.619 kb on - strand, within OH686_21310 at 4366.619 kb on - strand, within OH686_21310 at 4366.619 kb on - strand, within OH686_21310 at 4366.619 kb on - strand, within OH686_21310 at 4366.753 kb on + strand, within OH686_21310 at 4366.753 kb on + strand, within OH686_21310 at 4366.754 kb on - strand, within OH686_21310 at 4366.754 kb on - strand, within OH686_21310 at 4366.754 kb on - strand, within OH686_21310 at 4366.754 kb on - strand, within OH686_21310 at 4366.754 kb on - strand, within OH686_21310 at 4366.754 kb on - strand, within OH686_21310 at 4366.754 kb on - strand, within OH686_21310 at 4366.846 kb on + strand, within OH686_21310 at 4366.847 kb on - strand, within OH686_21310 at 4367.050 kb on + strand at 4367.139 kb on + strand at 4367.140 kb on - strand at 4367.140 kb on - strand at 4367.140 kb on - strand at 4367.219 kb on + strand, within OH686_21315 at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on + strand at 4367.446 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.447 kb on - strand at 4367.481 kb on + strand at 4367.481 kb on + strand at 4367.482 kb on - strand at 4367.493 kb on + strand at 4367.493 kb on + strand at 4367.493 kb on + strand at 4368.592 kb on + strand at 4368.592 kb on + strand at 4368.593 kb on - strand at 4368.593 kb on - strand at 4368.594 kb on + strand at 4368.594 kb on + strand at 4368.594 kb on + strand at 4368.594 kb on + strand at 4368.594 kb on + strand at 4368.594 kb on + strand at 4368.594 kb on + strand at 4368.594 kb on + strand at 4368.594 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 4,366,534 + OH686_21310 0.52 +0.0 4,366,534 + OH686_21310 0.52 -0.7 4,366,534 + OH686_21310 0.52 -0.4 4,366,534 + OH686_21310 0.52 -0.4 4,366,535 - OH686_21310 0.52 -0.2 4,366,535 - OH686_21310 0.52 +0.7 4,366,535 - OH686_21310 0.52 +0.3 4,366,535 - OH686_21310 0.52 +1.2 4,366,618 + OH686_21310 0.59 +0.5 4,366,618 + OH686_21310 0.59 -1.3 4,366,618 + OH686_21310 0.59 +0.1 4,366,618 + OH686_21310 0.59 +0.0 4,366,619 - OH686_21310 0.59 -1.8 4,366,619 - OH686_21310 0.59 -1.4 4,366,619 - OH686_21310 0.59 -0.4 4,366,619 - OH686_21310 0.59 -0.3 4,366,619 - OH686_21310 0.59 +0.3 4,366,619 - OH686_21310 0.59 -0.1 4,366,619 - OH686_21310 0.59 -1.1 4,366,753 + OH686_21310 0.69 +1.4 4,366,753 + OH686_21310 0.69 -0.4 4,366,754 - OH686_21310 0.69 -0.2 4,366,754 - OH686_21310 0.69 -0.5 4,366,754 - OH686_21310 0.69 +0.1 4,366,754 - OH686_21310 0.69 +1.9 4,366,754 - OH686_21310 0.69 -0.1 4,366,754 - OH686_21310 0.69 -0.4 4,366,754 - OH686_21310 0.69 +1.6 4,366,846 + OH686_21310 0.76 -0.1 4,366,847 - OH686_21310 0.76 +0.0 4,367,050 + +0.5 4,367,139 + +0.2 4,367,140 - +0.3 4,367,140 - +0.0 4,367,140 - +0.1 4,367,219 + OH686_21315 0.11 +1.0 4,367,446 + -1.0 4,367,446 + -0.7 4,367,446 + +1.4 4,367,446 + -0.3 4,367,446 + -1.0 4,367,446 + -0.6 4,367,446 + +0.4 4,367,446 + -0.6 4,367,446 + +1.5 4,367,446 + +0.2 4,367,446 + +1.2 4,367,446 + -0.6 4,367,446 + +1.1 4,367,446 + +0.6 4,367,446 + +1.6 4,367,446 + -0.1 4,367,446 + -0.3 4,367,446 + +0.1 4,367,446 + +1.7 4,367,446 + -0.9 4,367,446 - -0.5 4,367,447 - +0.6 4,367,447 - +1.0 4,367,447 - +0.2 4,367,447 - -0.2 4,367,447 - +0.1 4,367,447 - +0.6 4,367,447 - -1.5 4,367,447 - -0.2 4,367,447 - -0.8 4,367,447 - -0.7 4,367,447 - +0.3 4,367,447 - +0.6 4,367,447 - -0.8 4,367,447 - +0.2 4,367,447 - -0.2 4,367,447 - +0.8 4,367,447 - -0.1 4,367,447 - +0.9 4,367,447 - -1.1 4,367,447 - +0.6 4,367,481 + -0.1 4,367,481 + +0.1 4,367,482 - +0.1 4,367,493 + +1.3 4,367,493 + +1.1 4,367,493 + -0.6 4,368,592 + -0.1 4,368,592 + -0.6 4,368,593 - +1.0 4,368,593 - +0.0 4,368,594 + -0.0 4,368,594 + -0.1 4,368,594 + -0.1 4,368,594 + +0.3 4,368,594 + -0.2 4,368,594 + +0.9 4,368,594 + -0.5 4,368,594 + -0.8 4,368,594 + -0.3
Or see this region's nucleotide sequence