Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_19920 and OH686_19925 are separated by 1 nucleotides OH686_19925 and OH686_19930 are separated by 32 nucleotides OH686_19930 and OH686_19935 are separated by 52 nucleotides OH686_19935 and OH686_19940 are separated by 257 nucleotides
OH686_19920: OH686_19920 - hypothetical protein, at 4,078,648 to 4,079,100
_19920
OH686_19925: OH686_19925 - hypothetical protein, at 4,079,102 to 4,079,788
_19925
OH686_19930: OH686_19930 - hypothetical protein, at 4,079,821 to 4,080,378
_19930
OH686_19935: OH686_19935 - bacterioferritin, at 4,080,431 to 4,080,901
_19935
OH686_19940: OH686_19940 - putative membrane protein, at 4,081,159 to 4,081,524
_19940
Position (kb) 4079
4080
4081 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4078.904 kb on + strand, within OH686_19920 at 4078.945 kb on + strand, within OH686_19920 at 4078.945 kb on + strand, within OH686_19920 at 4078.945 kb on + strand, within OH686_19920 at 4078.946 kb on - strand, within OH686_19920 at 4078.946 kb on - strand, within OH686_19920 at 4078.946 kb on - strand, within OH686_19920 at 4078.987 kb on + strand, within OH686_19920 at 4078.987 kb on + strand, within OH686_19920 at 4078.987 kb on + strand, within OH686_19920 at 4078.987 kb on + strand, within OH686_19920 at 4078.987 kb on + strand, within OH686_19920 at 4078.987 kb on + strand, within OH686_19920 at 4078.987 kb on + strand, within OH686_19920 at 4078.987 kb on + strand, within OH686_19920 at 4078.987 kb on + strand, within OH686_19920 at 4078.987 kb on + strand, within OH686_19920 at 4078.988 kb on - strand, within OH686_19920 at 4078.988 kb on - strand, within OH686_19920 at 4078.988 kb on - strand, within OH686_19920 at 4078.988 kb on - strand, within OH686_19920 at 4078.988 kb on - strand, within OH686_19920 at 4078.988 kb on - strand, within OH686_19920 at 4078.988 kb on - strand, within OH686_19920 at 4078.988 kb on - strand, within OH686_19920 at 4079.141 kb on + strand at 4079.141 kb on + strand at 4079.141 kb on + strand at 4079.141 kb on + strand at 4079.141 kb on + strand at 4079.141 kb on + strand at 4079.141 kb on + strand at 4079.141 kb on + strand at 4079.141 kb on + strand at 4079.142 kb on - strand at 4079.142 kb on - strand at 4079.182 kb on + strand, within OH686_19925 at 4079.200 kb on + strand, within OH686_19925 at 4079.200 kb on + strand, within OH686_19925 at 4079.201 kb on - strand, within OH686_19925 at 4079.201 kb on - strand, within OH686_19925 at 4079.201 kb on - strand, within OH686_19925 at 4079.201 kb on - strand, within OH686_19925 at 4079.201 kb on - strand, within OH686_19925 at 4079.204 kb on + strand, within OH686_19925 at 4079.204 kb on + strand, within OH686_19925 at 4079.204 kb on + strand, within OH686_19925 at 4079.204 kb on + strand, within OH686_19925 at 4079.205 kb on - strand, within OH686_19925 at 4079.205 kb on - strand, within OH686_19925 at 4079.224 kb on + strand, within OH686_19925 at 4079.225 kb on - strand, within OH686_19925 at 4079.272 kb on + strand, within OH686_19925 at 4079.272 kb on + strand, within OH686_19925 at 4079.272 kb on + strand, within OH686_19925 at 4079.272 kb on + strand, within OH686_19925 at 4079.272 kb on + strand, within OH686_19925 at 4079.272 kb on + strand, within OH686_19925 at 4079.272 kb on + strand, within OH686_19925 at 4079.272 kb on + strand, within OH686_19925 at 4079.273 kb on - strand, within OH686_19925 at 4079.273 kb on - strand, within OH686_19925 at 4079.273 kb on - strand, within OH686_19925 at 4079.273 kb on - strand, within OH686_19925 at 4079.273 kb on - strand, within OH686_19925 at 4079.273 kb on - strand, within OH686_19925 at 4079.276 kb on + strand, within OH686_19925 at 4079.276 kb on + strand, within OH686_19925 at 4079.276 kb on + strand, within OH686_19925 at 4079.277 kb on - strand, within OH686_19925 at 4079.277 kb on - strand, within OH686_19925 at 4079.277 kb on - strand, within OH686_19925 at 4079.277 kb on - strand, within OH686_19925 at 4079.386 kb on + strand, within OH686_19925 at 4079.468 kb on + strand, within OH686_19925 at 4079.468 kb on + strand, within OH686_19925 at 4079.469 kb on - strand, within OH686_19925 at 4079.469 kb on - strand, within OH686_19925 at 4079.495 kb on + strand, within OH686_19925 at 4079.495 kb on + strand, within OH686_19925 at 4079.495 kb on + strand, within OH686_19925 at 4079.495 kb on + strand, within OH686_19925 at 4079.496 kb on - strand, within OH686_19925 at 4079.496 kb on - strand, within OH686_19925 at 4079.496 kb on - strand, within OH686_19925 at 4079.496 kb on - strand, within OH686_19925 at 4079.496 kb on - strand, within OH686_19925 at 4079.549 kb on + strand, within OH686_19925 at 4079.550 kb on - strand, within OH686_19925 at 4079.666 kb on + strand, within OH686_19925 at 4079.666 kb on + strand, within OH686_19925 at 4079.666 kb on + strand, within OH686_19925 at 4079.666 kb on + strand, within OH686_19925 at 4079.666 kb on + strand, within OH686_19925 at 4079.666 kb on + strand, within OH686_19925 at 4079.666 kb on + strand, within OH686_19925 at 4079.666 kb on + strand, within OH686_19925 at 4079.666 kb on + strand, within OH686_19925 at 4079.666 kb on + strand, within OH686_19925 at 4079.666 kb on + strand, within OH686_19925 at 4079.666 kb on + strand, within OH686_19925 at 4079.666 kb on + strand, within OH686_19925 at 4079.667 kb on - strand, within OH686_19925 at 4079.667 kb on - strand, within OH686_19925 at 4079.667 kb on - strand, within OH686_19925 at 4079.667 kb on - strand, within OH686_19925 at 4079.667 kb on - strand, within OH686_19925 at 4079.667 kb on - strand, within OH686_19925 at 4079.667 kb on - strand, within OH686_19925 at 4079.667 kb on - strand, within OH686_19925 at 4079.667 kb on - strand, within OH686_19925 at 4079.667 kb on - strand, within OH686_19925 at 4079.728 kb on + strand at 4079.728 kb on + strand at 4079.729 kb on - strand at 4079.729 kb on - strand at 4079.729 kb on - strand at 4079.729 kb on - strand at 4079.729 kb on - strand at 4079.979 kb on - strand, within OH686_19930 at 4080.043 kb on + strand, within OH686_19930 at 4080.144 kb on + strand, within OH686_19930 at 4080.144 kb on + strand, within OH686_19930 at 4080.145 kb on - strand, within OH686_19930 at 4080.145 kb on - strand, within OH686_19930 at 4080.145 kb on - strand, within OH686_19930 at 4080.199 kb on + strand, within OH686_19930 at 4080.199 kb on + strand, within OH686_19930 at 4080.200 kb on - strand, within OH686_19930 at 4080.200 kb on - strand, within OH686_19930 at 4080.200 kb on - strand, within OH686_19930 at 4080.234 kb on + strand, within OH686_19930 at 4080.234 kb on + strand, within OH686_19930 at 4080.234 kb on + strand, within OH686_19930 at 4080.234 kb on + strand, within OH686_19930 at 4080.234 kb on + strand, within OH686_19930 at 4080.234 kb on + strand, within OH686_19930 at 4080.235 kb on - strand, within OH686_19930 at 4080.235 kb on - strand, within OH686_19930 at 4080.238 kb on + strand, within OH686_19930 at 4080.239 kb on - strand, within OH686_19930 at 4080.353 kb on - strand at 4080.353 kb on - strand at 4080.353 kb on - strand at 4080.353 kb on - strand at 4080.353 kb on - strand at 4080.367 kb on - strand at 4080.456 kb on + strand at 4080.457 kb on - strand at 4080.457 kb on - strand at 4080.457 kb on - strand at 4080.457 kb on - strand at 4080.457 kb on - strand at 4080.457 kb on - strand at 4080.457 kb on - strand at 4080.457 kb on - strand at 4080.457 kb on - strand at 4080.561 kb on + strand, within OH686_19935 at 4080.561 kb on + strand, within OH686_19935 at 4080.582 kb on + strand, within OH686_19935 at 4080.582 kb on + strand, within OH686_19935 at 4080.583 kb on - strand, within OH686_19935 at 4080.769 kb on - strand, within OH686_19935 at 4080.807 kb on + strand, within OH686_19935 at 4080.807 kb on + strand, within OH686_19935 at 4080.807 kb on + strand, within OH686_19935 at 4080.807 kb on + strand, within OH686_19935 at 4080.807 kb on + strand, within OH686_19935 at 4080.807 kb on + strand, within OH686_19935 at 4080.807 kb on + strand, within OH686_19935 at 4080.807 kb on + strand, within OH686_19935 at 4080.808 kb on - strand, within OH686_19935 at 4080.808 kb on - strand, within OH686_19935 at 4080.808 kb on - strand, within OH686_19935 at 4080.808 kb on - strand, within OH686_19935 at 4080.808 kb on - strand, within OH686_19935 at 4080.808 kb on - strand, within OH686_19935 at 4080.808 kb on - strand, within OH686_19935 at 4080.808 kb on - strand, within OH686_19935 at 4080.828 kb on + strand, within OH686_19935 at 4080.828 kb on + strand, within OH686_19935 at 4080.828 kb on + strand, within OH686_19935 at 4080.828 kb on + strand, within OH686_19935 at 4080.829 kb on - strand, within OH686_19935 at 4080.983 kb on + strand at 4080.984 kb on - strand at 4080.984 kb on - strand at 4080.999 kb on - strand at 4081.050 kb on + strand at 4081.090 kb on + strand at 4081.116 kb on + strand at 4081.117 kb on - strand at 4081.117 kb on - strand at 4081.117 kb on - strand at 4081.117 kb on - strand at 4081.318 kb on + strand, within OH686_19940 at 4081.318 kb on + strand, within OH686_19940 at 4081.319 kb on - strand, within OH686_19940 at 4081.319 kb on - strand, within OH686_19940 at 4081.319 kb on - strand, within OH686_19940 at 4081.319 kb on - strand, within OH686_19940
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 4,078,904 + OH686_19920 0.57 +1.0 4,078,945 + OH686_19920 0.66 +0.5 4,078,945 + OH686_19920 0.66 -0.2 4,078,945 + OH686_19920 0.66 +0.5 4,078,946 - OH686_19920 0.66 -1.0 4,078,946 - OH686_19920 0.66 +0.1 4,078,946 - OH686_19920 0.66 -1.4 4,078,987 + OH686_19920 0.75 +0.6 4,078,987 + OH686_19920 0.75 +0.1 4,078,987 + OH686_19920 0.75 +0.2 4,078,987 + OH686_19920 0.75 -0.4 4,078,987 + OH686_19920 0.75 +0.1 4,078,987 + OH686_19920 0.75 +1.1 4,078,987 + OH686_19920 0.75 -0.6 4,078,987 + OH686_19920 0.75 +1.2 4,078,987 + OH686_19920 0.75 -2.6 4,078,987 + OH686_19920 0.75 +0.5 4,078,988 - OH686_19920 0.75 -0.9 4,078,988 - OH686_19920 0.75 +0.3 4,078,988 - OH686_19920 0.75 +0.6 4,078,988 - OH686_19920 0.75 -0.5 4,078,988 - OH686_19920 0.75 +0.4 4,078,988 - OH686_19920 0.75 +1.1 4,078,988 - OH686_19920 0.75 +0.2 4,078,988 - OH686_19920 0.75 -1.1 4,079,141 + +0.4 4,079,141 + -0.5 4,079,141 + -0.2 4,079,141 + +0.3 4,079,141 + +0.1 4,079,141 + +0.3 4,079,141 + +0.0 4,079,141 + +2.1 4,079,141 + +0.2 4,079,142 - -0.3 4,079,142 - -0.5 4,079,182 + OH686_19925 0.12 +0.3 4,079,200 + OH686_19925 0.14 -1.0 4,079,200 + OH686_19925 0.14 -0.4 4,079,201 - OH686_19925 0.14 -0.3 4,079,201 - OH686_19925 0.14 +0.7 4,079,201 - OH686_19925 0.14 -0.4 4,079,201 - OH686_19925 0.14 -0.1 4,079,201 - OH686_19925 0.14 -0.6 4,079,204 + OH686_19925 0.15 +0.0 4,079,204 + OH686_19925 0.15 -0.8 4,079,204 + OH686_19925 0.15 -0.2 4,079,204 + OH686_19925 0.15 -0.4 4,079,205 - OH686_19925 0.15 +0.1 4,079,205 - OH686_19925 0.15 +0.9 4,079,224 + OH686_19925 0.18 +0.7 4,079,225 - OH686_19925 0.18 +0.3 4,079,272 + OH686_19925 0.25 +0.5 4,079,272 + OH686_19925 0.25 +0.3 4,079,272 + OH686_19925 0.25 -1.0 4,079,272 + OH686_19925 0.25 -0.4 4,079,272 + OH686_19925 0.25 -0.4 4,079,272 + OH686_19925 0.25 +0.1 4,079,272 + OH686_19925 0.25 +0.5 4,079,272 + OH686_19925 0.25 -1.1 4,079,273 - OH686_19925 0.25 +1.8 4,079,273 - OH686_19925 0.25 +0.7 4,079,273 - OH686_19925 0.25 +0.3 4,079,273 - OH686_19925 0.25 +0.4 4,079,273 - OH686_19925 0.25 +0.0 4,079,273 - OH686_19925 0.25 +0.6 4,079,276 + OH686_19925 0.25 +1.2 4,079,276 + OH686_19925 0.25 -1.0 4,079,276 + OH686_19925 0.25 +0.0 4,079,277 - OH686_19925 0.25 +0.7 4,079,277 - OH686_19925 0.25 +1.3 4,079,277 - OH686_19925 0.25 -0.5 4,079,277 - OH686_19925 0.25 -1.1 4,079,386 + OH686_19925 0.41 +1.2 4,079,468 + OH686_19925 0.53 +0.0 4,079,468 + OH686_19925 0.53 -0.1 4,079,469 - OH686_19925 0.53 +0.3 4,079,469 - OH686_19925 0.53 +0.5 4,079,495 + OH686_19925 0.57 -0.5 4,079,495 + OH686_19925 0.57 +0.1 4,079,495 + OH686_19925 0.57 +0.1 4,079,495 + OH686_19925 0.57 -0.1 4,079,496 - OH686_19925 0.57 +0.9 4,079,496 - OH686_19925 0.57 +1.0 4,079,496 - OH686_19925 0.57 +0.1 4,079,496 - OH686_19925 0.57 -0.1 4,079,496 - OH686_19925 0.57 -0.0 4,079,549 + OH686_19925 0.65 -0.5 4,079,550 - OH686_19925 0.65 +0.8 4,079,666 + OH686_19925 0.82 -0.6 4,079,666 + OH686_19925 0.82 -0.2 4,079,666 + OH686_19925 0.82 -0.8 4,079,666 + OH686_19925 0.82 +0.2 4,079,666 + OH686_19925 0.82 -1.5 4,079,666 + OH686_19925 0.82 -0.9 4,079,666 + OH686_19925 0.82 +0.2 4,079,666 + OH686_19925 0.82 -0.9 4,079,666 + OH686_19925 0.82 +0.3 4,079,666 + OH686_19925 0.82 +0.1 4,079,666 + OH686_19925 0.82 +0.2 4,079,666 + OH686_19925 0.82 +0.3 4,079,666 + OH686_19925 0.82 +0.3 4,079,667 - OH686_19925 0.82 +0.1 4,079,667 - OH686_19925 0.82 +0.2 4,079,667 - OH686_19925 0.82 +0.4 4,079,667 - OH686_19925 0.82 -0.5 4,079,667 - OH686_19925 0.82 +0.2 4,079,667 - OH686_19925 0.82 +0.3 4,079,667 - OH686_19925 0.82 +0.4 4,079,667 - OH686_19925 0.82 -0.2 4,079,667 - OH686_19925 0.82 -0.3 4,079,667 - OH686_19925 0.82 -1.5 4,079,728 + +0.1 4,079,728 + +1.0 4,079,729 - +0.2 4,079,729 - -1.0 4,079,729 - -0.9 4,079,729 - -0.3 4,079,729 - +0.9 4,079,979 - OH686_19930 0.28 -0.3 4,080,043 + OH686_19930 0.40 +0.0 4,080,144 + OH686_19930 0.58 +0.9 4,080,144 + OH686_19930 0.58 +0.1 4,080,145 - OH686_19930 0.58 -0.3 4,080,145 - OH686_19930 0.58 +0.3 4,080,145 - OH686_19930 0.58 +0.4 4,080,199 + OH686_19930 0.68 +0.6 4,080,199 + OH686_19930 0.68 +0.0 4,080,200 - OH686_19930 0.68 +0.3 4,080,200 - OH686_19930 0.68 +0.3 4,080,200 - OH686_19930 0.68 +0.9 4,080,234 + OH686_19930 0.74 +0.1 4,080,234 + OH686_19930 0.74 +0.2 4,080,234 + OH686_19930 0.74 -0.6 4,080,234 + OH686_19930 0.74 -0.3 4,080,234 + OH686_19930 0.74 +0.0 4,080,234 + OH686_19930 0.74 +0.5 4,080,235 - OH686_19930 0.74 +0.6 4,080,235 - OH686_19930 0.74 +0.3 4,080,238 + OH686_19930 0.75 -0.1 4,080,239 - OH686_19930 0.75 -0.4 4,080,353 - +0.6 4,080,353 - -0.5 4,080,353 - -0.3 4,080,353 - -0.1 4,080,353 - -0.3 4,080,367 - +0.6 4,080,456 + -0.7 4,080,457 - +0.8 4,080,457 - +0.3 4,080,457 - -0.4 4,080,457 - -0.1 4,080,457 - -0.3 4,080,457 - -0.1 4,080,457 - +0.1 4,080,457 - +0.1 4,080,457 - +0.3 4,080,561 + OH686_19935 0.28 +0.4 4,080,561 + OH686_19935 0.28 +0.5 4,080,582 + OH686_19935 0.32 -2.1 4,080,582 + OH686_19935 0.32 -0.1 4,080,583 - OH686_19935 0.32 +0.1 4,080,769 - OH686_19935 0.72 +0.5 4,080,807 + OH686_19935 0.80 -0.2 4,080,807 + OH686_19935 0.80 +0.9 4,080,807 + OH686_19935 0.80 -0.7 4,080,807 + OH686_19935 0.80 +0.6 4,080,807 + OH686_19935 0.80 -0.9 4,080,807 + OH686_19935 0.80 +0.1 4,080,807 + OH686_19935 0.80 +0.3 4,080,807 + OH686_19935 0.80 +0.2 4,080,808 - OH686_19935 0.80 -2.4 4,080,808 - OH686_19935 0.80 -0.7 4,080,808 - OH686_19935 0.80 -0.5 4,080,808 - OH686_19935 0.80 -0.7 4,080,808 - OH686_19935 0.80 -1.4 4,080,808 - OH686_19935 0.80 -1.2 4,080,808 - OH686_19935 0.80 +2.5 4,080,808 - OH686_19935 0.80 -1.0 4,080,828 + OH686_19935 0.84 -0.7 4,080,828 + OH686_19935 0.84 -0.6 4,080,828 + OH686_19935 0.84 +1.4 4,080,828 + OH686_19935 0.84 +0.5 4,080,829 - OH686_19935 0.85 -0.8 4,080,983 + +0.6 4,080,984 - +0.3 4,080,984 - +0.4 4,080,999 - +0.1 4,081,050 + +1.1 4,081,090 + -1.2 4,081,116 + -0.1 4,081,117 - +0.8 4,081,117 - +0.3 4,081,117 - +0.0 4,081,117 - +0.3 4,081,318 + OH686_19940 0.43 -1.1 4,081,318 + OH686_19940 0.43 -0.1 4,081,319 - OH686_19940 0.44 +0.9 4,081,319 - OH686_19940 0.44 +0.2 4,081,319 - OH686_19940 0.44 +0.2 4,081,319 - OH686_19940 0.44 -0.2
Or see this region's nucleotide sequence