Strain Fitness in Pseudomonas sp. S08-1 around OH686_13765

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
2,887,602	+		OH686_13760	0.39	-0.1
2,887,602	+		OH686_13760	0.39	+0.9
2,887,603	-		OH686_13760	0.39	-0.6
2,887,603	-		OH686_13760	0.39	+0.9
2,887,603	-		OH686_13760	0.39	-0.3
2,887,603	-		OH686_13760	0.39	-1.7
2,887,603	-		OH686_13760	0.39	+0.1
2,887,603	-		OH686_13760	0.39	+0.0
2,887,733	-		OH686_13760	0.49	-0.1
2,887,733	-		OH686_13760	0.49	-0.5
2,887,788	+		OH686_13760	0.53	+1.0
2,887,788	+		OH686_13760	0.53	+0.7
2,887,788	+		OH686_13760	0.53	-1.4
2,887,788	+		OH686_13760	0.53	+0.8
2,887,789	-		OH686_13760	0.53	+0.2
2,887,789	-		OH686_13760	0.53	-0.2
2,887,952	+		OH686_13760	0.66	+0.3
2,888,113	-		OH686_13760	0.78	-1.0
2,888,113	-		OH686_13760	0.78	-0.2
2,888,140	+		OH686_13760	0.80	+0.5
2,888,140	+		OH686_13760	0.80	+0.1
2,888,156	+		OH686_13760	0.81	-0.1
2,888,277	+				-0.3
2,888,277	+				-1.0
2,888,277	+				-0.3
2,888,277	+				+0.1
2,888,277	+				+0.2
2,888,277	+				+1.2
2,888,277	+				+0.4
2,888,277	+				-0.1
2,888,278	-				+0.0
2,888,278	-				+0.7
2,888,278	-				-0.6
2,888,278	-				+0.3
2,888,278	-				-0.4
2,888,278	-				-0.1
2,888,278	-				-1.2
2,888,278	-				+0.5
2,888,394	+				-0.4
2,888,395	-				-1.0
2,888,403	+				-0.8
2,888,403	+				-0.5
2,888,404	-				+0.9
2,888,404	-				-0.5
2,888,404	-				+1.1
2,888,404	-				+0.1
2,888,404	-				-0.6
2,888,404	-				+0.5
2,888,486	+				+0.1
2,888,486	+				-1.7
2,888,486	+				-0.2
2,888,486	+				+0.3
2,888,486	+				-0.3
2,888,487	-				-0.9
2,888,487	-				-0.1
2,888,487	-				-0.3
2,888,487	-				+0.6
2,888,487	-				-0.5
2,888,496	+				-0.4
2,888,496	+				+0.3
2,888,497	-				-0.0
2,888,497	-				+0.4
2,888,497	-				+0.2
2,888,532	+				-0.1
2,888,532	+				+0.4
2,888,533	-				+1.2
2,888,533	-				+0.4
2,888,533	-				+0.7
2,888,550	+				-0.3
2,888,550	+				-2.2
2,888,550	+				-0.5
2,888,550	+				+0.1
2,888,551	-				-0.7
2,888,551	-				-0.7
2,888,551	-				+0.7
2,888,551	-				-0.7
2,888,551	-				-0.4
2,888,551	-				-0.9
2,888,551	-				-0.1
2,888,554	+				-0.1
2,888,554	+				+0.4
2,888,554	+				+0.2
2,888,554	+				+0.0
2,888,554	+				+0.3
2,888,554	+				-0.3
2,888,554	+				-0.2
2,888,554	+				-0.2
2,888,555	-				-0.3
2,888,555	-				+0.0
2,888,555	-				-0.0
2,888,555	-				+0.2
2,888,555	-				+2.7
2,888,667	+		OH686_13765	0.13	+2.2
2,888,667	+		OH686_13765	0.13	+0.0
2,888,688	+		OH686_13765	0.15	+0.2
2,888,688	+		OH686_13765	0.15	-0.7
2,888,688	+		OH686_13765	0.15	+0.9
2,888,688	+		OH686_13765	0.15	+0.4
2,888,688	+		OH686_13765	0.15	-0.2
2,888,688	+		OH686_13765	0.15	-0.4
2,888,688	+		OH686_13765	0.15	+0.4
2,888,688	+		OH686_13765	0.15	+1.3
2,888,688	+		OH686_13765	0.15	+1.0
2,888,688	+		OH686_13765	0.15	-1.1
2,888,688	+		OH686_13765	0.15	-0.6
2,888,688	+		OH686_13765	0.15	+0.5
2,888,689	-		OH686_13765	0.15	-0.1
2,888,689	-		OH686_13765	0.15	-1.2
2,888,689	-		OH686_13765	0.15	+0.2
2,888,689	-		OH686_13765	0.15	+0.3
2,888,689	-		OH686_13765	0.15	-0.3
2,888,689	-		OH686_13765	0.15	+0.1
2,888,689	-		OH686_13765	0.15	-0.3
2,888,689	-		OH686_13765	0.15	+1.1
2,888,689	-		OH686_13765	0.15	-0.1
2,888,689	-		OH686_13765	0.15	-0.1
2,888,689	-		OH686_13765	0.15	-0.6
2,888,689	-		OH686_13765	0.15	-0.2
2,888,703	+		OH686_13765	0.16	-1.3
2,888,703	+		OH686_13765	0.16	+0.3
2,888,706	+		OH686_13765	0.16	-0.3
2,888,706	+		OH686_13765	0.16	-0.3
2,888,706	+		OH686_13765	0.16	+0.1
2,888,706	+		OH686_13765	0.16	+0.0
2,888,706	+		OH686_13765	0.16	+0.6
2,888,706	+		OH686_13765	0.16	-0.1
2,888,706	+		OH686_13765	0.16	-1.7
2,888,706	+		OH686_13765	0.16	+1.5
2,888,707	-		OH686_13765	0.16	+0.2
2,888,707	-		OH686_13765	0.16	-0.5
2,888,707	-		OH686_13765	0.16	+0.4
2,888,707	-		OH686_13765	0.16	-1.7
2,888,707	-		OH686_13765	0.16	-0.6
2,888,715	+		OH686_13765	0.17	-0.7
2,888,715	+		OH686_13765	0.17	+0.7
2,888,715	+		OH686_13765	0.17	+0.3
2,888,715	+		OH686_13765	0.17	-0.2
2,888,715	+		OH686_13765	0.17	-0.4
2,888,715	+		OH686_13765	0.17	+0.1
2,888,715	+		OH686_13765	0.17	+1.6
2,888,715	+		OH686_13765	0.17	+0.4
2,888,715	+		OH686_13765	0.17	+0.6
2,888,715	+		OH686_13765	0.17	+0.5
2,888,715	+		OH686_13765	0.17	+1.3
2,888,715	+		OH686_13765	0.17	+0.6
2,888,715	+		OH686_13765	0.17	+1.1
2,888,715	+		OH686_13765	0.17	-0.5
2,888,715	+		OH686_13765	0.17	-1.2
2,888,715	+		OH686_13765	0.17	-0.4
2,888,715	+		OH686_13765	0.17	-0.6
2,888,715	+		OH686_13765	0.17	+0.3
2,888,715	+		OH686_13765	0.17	-0.1
2,888,716	-		OH686_13765	0.17	+0.1
2,888,716	-		OH686_13765	0.17	-0.3
2,888,716	-		OH686_13765	0.17	-0.7
2,888,716	-		OH686_13765	0.17	+1.2
2,888,716	-		OH686_13765	0.17	+0.7
2,888,716	-		OH686_13765	0.17	+0.1
2,888,716	-		OH686_13765	0.17	+0.5
2,888,716	-		OH686_13765	0.17	-0.0
2,888,716	-		OH686_13765	0.17	+0.3
2,888,716	-		OH686_13765	0.17	+0.2
2,888,716	-		OH686_13765	0.17	-0.3
2,888,952	+		OH686_13765	0.36	-0.1
2,888,952	+		OH686_13765	0.36	-0.5
2,888,953	-		OH686_13765	0.36	-0.3
2,888,953	-		OH686_13765	0.36	+0.3
2,888,968	-		OH686_13765	0.37	+0.2
2,889,099	+		OH686_13765	0.48	-2.2
2,889,099	+		OH686_13765	0.48	-1.3
2,889,099	+		OH686_13765	0.48	-0.0
2,889,099	+		OH686_13765	0.48	-0.0
2,889,099	+		OH686_13765	0.48	-0.5
2,889,100	-		OH686_13765	0.48	+0.7
2,889,100	-		OH686_13765	0.48	-1.7
2,889,100	-		OH686_13765	0.48	-1.2
2,889,100	-		OH686_13765	0.48	-0.7
2,889,100	-		OH686_13765	0.48	-1.2
2,889,100	-		OH686_13765	0.48	-0.1
2,889,690	+				-0.4
2,889,690	+				+0.4
2,889,690	+				-0.5
2,889,690	+				-0.1
2,889,690	+				+0.5
2,889,690	+				-0.6
2,889,690	+				-1.2
2,889,690	+				+1.3
2,889,690	+				-0.4
2,889,691	-				+0.7
2,889,730	-				+0.0
2,889,872	-				+0.3
2,889,872	-				-1.8
2,889,872	-				+0.9
2,889,872	-				-0.5
2,889,887	+				+0.3
2,889,887	+				-1.1
2,889,887	+				+0.2
2,889,888	-				-0.6
2,889,888	-				+0.5
2,889,888	-				-0.2
2,889,964	+		OH686_13770	0.12	-0.8
2,889,965	-		OH686_13770	0.13	+0.6
2,889,965	-		OH686_13770	0.13	-0.3
2,890,140	+		OH686_13770	0.52	+0.2
2,890,140	+		OH686_13770	0.52	+0.4
2,890,140	+		OH686_13770	0.52	+0.5
2,890,140	+		OH686_13770	0.52	+0.5
2,890,140	+		OH686_13770	0.52	-0.6
2,890,141	-		OH686_13770	0.52	+0.3
2,890,152	+		OH686_13770	0.55	+0.2
2,890,152	+		OH686_13770	0.55	+0.5
2,890,152	+		OH686_13770	0.55	-0.3
2,890,153	-		OH686_13770	0.55	-0.2
2,890,153	-		OH686_13770	0.55	-0.1
2,890,153	-		OH686_13770	0.55	+0.4
2,890,153	-		OH686_13770	0.55	+0.1
2,890,263	+		OH686_13770	0.80	+0.2
2,890,263	+		OH686_13770	0.80	-0.9
2,890,263	+		OH686_13770	0.80	+0.3
2,890,263	+		OH686_13770	0.80	-0.7
2,890,263	+		OH686_13770	0.80	-0.8
2,890,263	+		OH686_13770	0.80	-0.7
2,890,263	+		OH686_13770	0.80	+0.9
2,890,263	+		OH686_13770	0.80	+1.0
2,890,263	+		OH686_13770	0.80	-0.4
2,890,263	+		OH686_13770	0.80	-0.1
2,890,263	+		OH686_13770	0.80	+0.3
2,890,263	+		OH686_13770	0.80	-0.4
2,890,263	+		OH686_13770	0.80	-0.7
2,890,263	+		OH686_13770	0.80	-0.3
2,890,263	+		OH686_13770	0.80	+0.2
2,890,263	+		OH686_13770	0.80	+0.3
2,890,264	-		OH686_13770	0.80	-0.3
2,890,264	-		OH686_13770	0.80	-0.6
2,890,264	-		OH686_13770	0.80	+0.1
2,890,264	-		OH686_13770	0.80	-0.4
2,890,264	-		OH686_13770	0.80	-2.2
2,890,264	-		OH686_13770	0.80	-0.7
2,890,264	-		OH686_13770	0.80	-0.2
2,890,264	-		OH686_13770	0.80	-0.1
2,890,264	-		OH686_13770	0.80	-1.0
2,890,264	-		OH686_13770	0.80	-0.8
2,890,264	-		OH686_13770	0.80	-0.0
2,890,264	-		OH686_13770	0.80	-0.4
2,890,264	-		OH686_13770	0.80	-0.4
2,890,264	-		OH686_13770	0.80	-0.2
2,890,264	-		OH686_13770	0.80	-0.7
2,890,264	-		OH686_13770	0.80	-0.7
2,890,393	+				-0.5
2,890,393	+				-1.0
2,890,393	+				-1.3
2,890,393	+				-1.4
2,890,393	+				-1.1
2,890,394	-				-1.1
2,890,394	-				-0.2
2,890,394	-				-0.1
2,890,395	+				-0.8
2,890,395	+				-0.1
2,890,395	+				-0.6
2,890,395	+				+0.5
2,890,395	+				+0.0
2,890,395	+				+0.5
2,890,395	+				-0.1
2,890,395	+				+0.9
2,890,395	+				+0.7
2,890,395	+				-2.1
2,890,395	+				+1.8
2,890,395	+				-0.3
2,890,395	+				-0.4
2,890,395	+				+0.5
2,890,395	+				-0.2
2,890,395	+				-1.1
2,890,395	+				-0.0
2,890,396	-				+0.3
2,890,396	-				-0.6
2,890,396	-				+1.3
2,890,396	-				+0.1
2,890,396	-				-0.6
2,890,396	-				-0.2
2,890,396	-				-0.1
2,890,396	-				-0.1
2,890,396	-				+0.0
2,890,396	-				+0.4
2,890,396	-				-1.8
2,890,396	-				-0.5
2,890,396	-				-0.5
2,890,399	+				+1.5
2,890,400	-				+0.7
2,890,400	-				+1.1
2,890,400	-				-0.2
2,890,400	-				-0.5
2,890,400	-				-0.2
2,890,400	-				-1.2
2,890,400	-				-0.8
2,890,400	-				+1.9
2,890,425	+				-0.1
2,890,425	+				-1.3
2,890,425	+				-0.1
2,890,425	+				-1.2
2,890,425	+				+1.9
2,890,425	+				+0.0
2,890,426	-				+0.4
2,890,426	-				-0.7
2,890,426	-				-0.2
2,890,426	-				-1.1
2,890,426	-				+0.5
2,890,426	-				+0.1
2,890,609	+		OH686_13775	0.54	-1.1
2,890,609	+		OH686_13775	0.54	-0.8
2,890,609	+		OH686_13775	0.54	-0.1
2,890,609	+		OH686_13775	0.54	-0.5
2,890,609	+		OH686_13775	0.54	+0.6
2,890,609	+		OH686_13775	0.54	-0.5
2,890,609	+		OH686_13775	0.54	-0.3
2,890,609	+		OH686_13775	0.54	+1.1
2,890,609	+		OH686_13775	0.54	-0.4
2,890,609	+		OH686_13775	0.54	-0.3
2,890,609	+		OH686_13775	0.54	-0.5
2,890,609	+		OH686_13775	0.54	+0.3
2,890,610	-		OH686_13775	0.55	-1.3
2,890,610	-		OH686_13775	0.55	+0.3
2,890,610	-		OH686_13775	0.55	-0.3
2,890,610	-		OH686_13775	0.55	-1.5
2,890,610	-		OH686_13775	0.55	-0.1
2,890,610	-		OH686_13775	0.55	-0.7
2,890,610	-		OH686_13775	0.55	+0.2
2,890,610	-		OH686_13775	0.55	+0.1
2,890,610	-		OH686_13775	0.55	-0.0
2,890,610	-		OH686_13775	0.55	-0.8
2,890,610	-		OH686_13775	0.55	+0.5
2,890,610	-		OH686_13775	0.55	+0.9
2,890,610	-		OH686_13775	0.55	-0.3
2,890,610	-		OH686_13775	0.55	+0.0
2,890,610	-		OH686_13775	0.55	+0.9
2,890,610	-		OH686_13775	0.55	-0.2
2,890,610	-		OH686_13775	0.55	-0.3
2,890,737	+				+1.0
2,890,737	+				-1.1