Strain Fitness in Pseudomonas simiae WCS417 around PS417_04925

Experiment: A22 0.16 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.16 mg/ml
1,095,983	-				-0.9
1,096,032	-				+0.5
1,096,063	-				+0.3
1,096,066	+				-0.1
1,096,066	+				+0.3
1,096,066	+				-0.5
1,096,066	+				-0.5
1,096,067	-				-0.4
1,096,067	-				+0.4
1,096,077	-				-0.3
1,096,092	+				-0.5
1,096,107	-				+0.1
1,096,129	-				-0.8
1,096,129	-				-0.3
1,096,155	-				-0.4
1,096,305	-		PS417_04920	0.23	-0.7
1,096,375	-		PS417_04920	0.33	+0.5
1,096,576	-		PS417_04920	0.64	-0.4
1,096,576	-		PS417_04920	0.64	+0.3
1,096,576	-		PS417_04920	0.64	-0.1
1,096,647	+				-0.4
1,096,648	-		PS417_04920	0.75	+0.0
1,097,293	+		PS417_04925	0.39	+0.4
1,097,294	-		PS417_04925	0.39	+0.6
1,097,294	-		PS417_04925	0.39	-0.1
1,097,521	+		PS417_04925	0.57	+1.0
1,097,521	+		PS417_04925	0.57	-0.8
1,097,521	+		PS417_04925	0.57	-0.4
1,097,521	+		PS417_04925	0.57	-0.0
1,097,521	+		PS417_04925	0.57	-0.2
1,097,521	+		PS417_04925	0.57	+0.4
1,097,522	-		PS417_04925	0.57	-0.8
1,097,522	-		PS417_04925	0.57	+1.0
1,097,522	-		PS417_04925	0.57	+0.4
1,097,522	-		PS417_04925	0.57	-1.0
1,097,522	-		PS417_04925	0.57	+1.2
1,097,522	-		PS417_04925	0.57	-0.5
1,097,548	+		PS417_04925	0.59	-1.1
1,097,752	+		PS417_04925	0.75	+0.2
1,097,753	-		PS417_04925	0.75	-0.0
1,097,753	-		PS417_04925	0.75	+0.0
1,098,041	-				+0.6
1,098,067	+				+0.1
1,098,073	+				+0.3
1,098,073	+				+0.5
1,098,074	-				+0.3
1,098,074	-				+0.1
1,098,074	-				-0.1
1,098,310	+		PS417_04930	0.38	+0.7
1,098,409	+		PS417_04930	0.54	-0.0
1,098,409	+		PS417_04930	0.54	+0.0
1,098,410	-				+2.2
1,098,427	+		PS417_04930	0.56	+0.1
1,098,679	-				-0.1
1,098,730	-				-0.5
1,098,821	+				+0.3
1,099,017	+		PS417_04935	0.26	-0.2
1,099,017	+		PS417_04935	0.26	-0.1
1,099,018	-		PS417_04935	0.26	-0.2
1,099,020	+		PS417_04935	0.26	+0.6