Strain Fitness in Pseudomonas simiae WCS417 around PS417_24455

Experiment: A22 0.16 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.16 mg/ml
5,308,601	+		PS417_24450	0.31	+0.2
5,308,666	+		PS417_24450	0.36	+1.3
5,308,734	+		PS417_24450	0.41	-0.7
5,308,734	+		PS417_24450	0.41	-1.3
5,308,734	+		PS417_24450	0.41	+0.0
5,308,734	+		PS417_24450	0.41	-0.0
5,308,735	-		PS417_24450	0.41	-0.6
5,308,735	-		PS417_24450	0.41	-0.1
5,308,735	-		PS417_24450	0.41	-0.1
5,308,856	+		PS417_24450	0.51	-0.3
5,308,857	-		PS417_24450	0.51	+0.2
5,308,857	-		PS417_24450	0.51	-0.1
5,308,947	-		PS417_24450	0.57	+0.3
5,308,977	-		PS417_24450	0.60	-0.0
5,308,977	-		PS417_24450	0.60	+0.1
5,308,982	+		PS417_24450	0.60	-1.3
5,308,983	-		PS417_24450	0.60	-0.5
5,309,012	+		PS417_24450	0.62	-0.1
5,309,012	+		PS417_24450	0.62	+0.0
5,309,012	+		PS417_24450	0.62	-0.4
5,309,013	-		PS417_24450	0.62	+0.7
5,309,013	-		PS417_24450	0.62	-0.1
5,309,013	-		PS417_24450	0.62	-0.4
5,309,064	-		PS417_24450	0.66	+0.0
5,309,300	+		PS417_24450	0.84	-2.3
5,309,301	-		PS417_24450	0.84	-2.0
5,309,417	+				+0.5
5,309,417	+				-0.1
5,309,418	-				-1.2
5,309,418	-				-0.3
5,309,450	+				+0.4
5,309,450	+				-0.0
5,309,451	-				+0.2
5,309,451	-				-1.6
5,309,451	-				-0.7
5,309,451	-				-0.3
5,309,474	+				+0.4
5,309,474	+				-0.3
5,309,474	+				+0.1
5,309,884	+		PS417_24455	0.42	+0.1
5,309,884	+		PS417_24455	0.42	-0.2
5,309,884	+				-0.3
5,309,884	+		PS417_24455	0.42	-1.1
5,310,100	+		PS417_24455	0.66	-1.5
5,310,101	-		PS417_24455	0.66	-0.2
5,310,157	-		PS417_24455	0.73	-0.2
5,310,290	-		PS417_24455	0.88	-1.5
5,310,440	+				-1.6
5,310,499	+				-0.2
5,310,573	+				+0.2
5,310,573	+				+0.6
5,310,573	+				-0.0
5,310,574	-				-0.5
5,310,574	-				-0.2
5,310,784	+		PS417_24460	0.50	-1.2
5,310,784	+		PS417_24460	0.50	-0.3
5,310,784	+		PS417_24460	0.50	-0.5
5,310,785	-		PS417_24460	0.51	+0.8
5,310,976	+				-0.2
5,310,988	+				+0.2
5,311,009	-				-0.9
5,311,015	-				-0.4
5,311,015	-				-0.3
5,311,015	-				-0.3
5,311,017	+				+0.9
5,311,018	-				+2.3
5,311,018	-				-0.7
5,311,018	-				+0.0
5,311,018	-				+0.4
5,311,078	+				-1.4