Strain Fitness in Pseudomonas simiae WCS417 around PS417_23215
Experiment: A22 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | A22 0.16 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 5,027,870 | - | -1.1 | |||
| 5,028,065 | - | PS417_23210 | 0.26 | -0.0 | |
| 5,028,658 | + | +0.2 | |||
| 5,028,710 | + | +0.2 | |||
| 5,028,712 | + | +1.4 | |||
| 5,028,712 | + | +0.6 | |||
| 5,028,713 | - | +0.3 | |||
| 5,028,713 | - | +0.2 | |||
| 5,028,713 | - | +1.2 | |||
| 5,028,835 | - | PS417_23215 | 0.25 | -0.7 | |
| 5,028,835 | - | PS417_23215 | 0.25 | -1.1 | |
| 5,028,835 | - | PS417_23215 | 0.25 | -0.9 | |
| 5,028,902 | + | PS417_23215 | 0.33 | +0.1 | |
| 5,028,903 | - | PS417_23215 | 0.34 | -0.6 | |
| 5,028,951 | + | PS417_23215 | 0.40 | +0.0 | |
| 5,029,381 | + | -0.3 | |||
| 5,029,472 | - | -0.1 | |||
| 5,029,486 | - | -0.4 |
Or see this region's nucleotide sequence