Strain Fitness in Pseudomonas simiae WCS417 around PS417_19705
Experiment: A22 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | A22 0.16 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,280,941 | - | -0.1 | |||
4,280,956 | + | +0.4 | |||
4,281,823 | - | +0.3 | |||
4,281,864 | - | +0.1 | |||
4,282,474 | - | PS417_19705 | 0.44 | -0.6 | |
4,282,482 | - | PS417_19705 | 0.45 | -0.3 | |
4,283,074 | - | PS417_19705 | 0.90 | -0.9 | |
4,283,498 | + | PS417_19710 | 0.13 | -0.6 | |
4,283,499 | - | +0.9 | |||
4,283,552 | + | PS417_19710 | 0.15 | +0.0 | |
4,283,552 | + | -0.1 | |||
4,283,552 | + | PS417_19710 | 0.15 | -0.1 | |
4,283,552 | + | PS417_19710 | 0.15 | +0.2 | |
4,283,614 | + | PS417_19710 | 0.18 | +0.4 | |
4,283,835 | + | PS417_19710 | 0.29 | +0.9 | |
4,283,836 | - | PS417_19710 | 0.29 | -2.5 | |
4,283,836 | - | PS417_19710 | 0.29 | +0.7 | |
4,283,969 | - | PS417_19710 | 0.35 | -1.4 | |
4,284,027 | + | PS417_19710 | 0.38 | -1.0 |
Or see this region's nucleotide sequence