Strain Fitness in Pseudomonas simiae WCS417 around PS417_16535
Experiment: A22 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | A22 0.16 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,613,453 | - | -0.6 | |||
3,613,533 | + | -0.0 | |||
3,613,533 | + | +0.1 | |||
3,613,534 | - | +0.1 | |||
3,613,541 | + | +0.1 | |||
3,613,542 | - | +0.7 | |||
3,613,672 | + | +1.6 | |||
3,613,673 | - | -0.2 | |||
3,613,673 | - | +0.2 | |||
3,613,673 | - | +0.2 | |||
3,613,673 | - | -1.0 | |||
3,613,969 | + | PS417_16535 | 0.46 | -0.4 | |
3,613,970 | - | PS417_16535 | 0.47 | -0.8 | |
3,613,970 | - | PS417_16535 | 0.47 | -0.3 | |
3,613,975 | + | PS417_16535 | 0.48 | -0.2 | |
3,614,002 | + | +0.9 | |||
3,614,050 | + | PS417_16535 | 0.64 | -0.7 | |
3,614,207 | - | +0.4 | |||
3,614,267 | + | +0.4 |
Or see this region's nucleotide sequence