Strain Fitness in Pseudomonas simiae WCS417 around PS417_15585
Experiment: A22 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | A22 0.16 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,416,749 | + | PS417_15580 | 0.70 | +0.8 | |
3,417,078 | - | PS417_15580 | 0.80 | +1.0 | |
3,417,672 | + | -0.1 | |||
3,417,767 | + | +0.2 | |||
3,417,767 | + | -0.1 | |||
3,418,631 | + | PS417_15585 | 0.68 | -0.0 | |
3,418,636 | - | PS417_15585 | 0.68 | +0.0 | |
3,418,796 | + | PS417_15585 | 0.79 | -0.3 | |
3,418,797 | - | PS417_15585 | 0.79 | -2.1 | |
3,418,874 | + | PS417_15585 | 0.85 | -0.5 | |
3,418,875 | - | PS417_15585 | 0.85 | -0.9 | |
3,419,073 | + | -0.7 | |||
3,419,073 | + | -0.6 | |||
3,419,449 | + | PS417_15590 | 0.57 | +0.0 | |
3,419,449 | + | PS417_15590 | 0.57 | +0.5 | |
3,419,450 | - | PS417_15590 | 0.58 | +0.1 | |
3,419,451 | + | PS417_15590 | 0.58 | -0.4 | |
3,419,786 | + | PS417_15595 | 0.12 | +1.6 | |
3,419,935 | - | PS417_15595 | 0.36 | -0.0 |
Or see this region's nucleotide sequence