Strain Fitness in Pseudomonas simiae WCS417 around PS417_14940
Experiment: A22 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | A22 0.16 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,261,815 | - | PS417_14935 | 0.16 | -0.5 | |
3,261,943 | + | PS417_14935 | 0.32 | +0.1 | |
3,262,126 | + | PS417_14935 | 0.54 | +1.2 | |
3,263,044 | - | PS417_14940 | 0.46 | -0.5 | |
3,263,741 | - | +0.1 | |||
3,264,020 | - | PS417_14945 | 0.21 | +0.3 | |
3,264,020 | - | PS417_14945 | 0.21 | -0.8 | |
3,264,140 | - | PS417_14945 | 0.28 | +0.1 | |
3,264,140 | - | PS417_14945 | 0.28 | +0.6 | |
3,264,211 | + | PS417_14945 | 0.32 | -0.5 | |
3,264,457 | + | -0.3 | |||
3,264,471 | - | PS417_14945 | 0.46 | -0.7 | |
3,264,488 | - | +1.5 |
Or see this region's nucleotide sequence