Experiment: A22 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_12745 and PS417_12750 overlap by 4 nucleotides PS417_12750 and PS417_12755 overlap by 4 nucleotides
PS417_12745: PS417_12745 - multidrug transporter, at 2,779,255 to 2,782,356
_12745
PS417_12750: PS417_12750 - acriflavine resistance protein B, at 2,782,353 to 2,785,460
_12750
PS417_12755: PS417_12755 - RND transporter, at 2,785,457 to 2,787,004
_12755
Position (kb)
2782
2783
2784
2785
2786 Strain fitness (log2 ratio)
-2
-1
0
1 at 2781.386 kb on - strand, within PS417_12745 at 2781.454 kb on + strand, within PS417_12745 at 2781.455 kb on - strand, within PS417_12745 at 2781.490 kb on + strand, within PS417_12745 at 2781.862 kb on + strand, within PS417_12745 at 2781.892 kb on + strand, within PS417_12745 at 2781.893 kb on - strand, within PS417_12745 at 2781.893 kb on - strand, within PS417_12745 at 2781.893 kb on - strand, within PS417_12745 at 2781.893 kb on - strand, within PS417_12745 at 2782.286 kb on - strand at 2782.816 kb on - strand, within PS417_12750 at 2783.074 kb on - strand, within PS417_12750 at 2783.401 kb on - strand, within PS417_12750 at 2783.484 kb on + strand, within PS417_12750 at 2783.705 kb on + strand, within PS417_12750 at 2784.351 kb on + strand, within PS417_12750 at 2784.583 kb on - strand, within PS417_12750 at 2784.630 kb on + strand, within PS417_12750 at 2784.654 kb on - strand, within PS417_12750 at 2784.964 kb on + strand, within PS417_12750 at 2784.965 kb on - strand, within PS417_12750 at 2784.965 kb on - strand, within PS417_12750 at 2784.984 kb on + strand at 2785.010 kb on + strand, within PS417_12750 at 2785.383 kb on + strand at 2785.498 kb on - strand at 2785.537 kb on + strand at 2785.592 kb on - strand at 2786.006 kb on - strand at 2786.177 kb on + strand, within PS417_12755 at 2786.178 kb on - strand, within PS417_12755
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.16 mg/ml remove 2,781,386 - PS417_12745 0.69 -0.3 2,781,454 + PS417_12745 0.71 -0.5 2,781,455 - PS417_12745 0.71 -0.7 2,781,490 + PS417_12745 0.72 +0.0 2,781,862 + PS417_12745 0.84 -0.9 2,781,892 + PS417_12745 0.85 -0.3 2,781,893 - PS417_12745 0.85 +0.2 2,781,893 - PS417_12745 0.85 +0.5 2,781,893 - PS417_12745 0.85 -0.5 2,781,893 - PS417_12745 0.85 -0.4 2,782,286 - -0.8 2,782,816 - PS417_12750 0.15 -2.3 2,783,074 - PS417_12750 0.23 -0.2 2,783,401 - PS417_12750 0.34 +0.1 2,783,484 + PS417_12750 0.36 -1.1 2,783,705 + PS417_12750 0.44 -1.6 2,784,351 + PS417_12750 0.64 -0.0 2,784,583 - PS417_12750 0.72 -0.1 2,784,630 + PS417_12750 0.73 -0.3 2,784,654 - PS417_12750 0.74 -0.6 2,784,964 + PS417_12750 0.84 -0.8 2,784,965 - PS417_12750 0.84 -1.2 2,784,965 - PS417_12750 0.84 -0.6 2,784,984 + +0.5 2,785,010 + PS417_12750 0.85 -0.1 2,785,383 + +1.1 2,785,498 - +0.5 2,785,537 + +0.0 2,785,592 - -0.5 2,786,006 - +1.5 2,786,177 + PS417_12755 0.47 -0.2 2,786,178 - PS417_12755 0.47 -1.1
Or see this region's nucleotide sequence