Experiment: A22 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00840 and PS417_00845 are separated by 76 nucleotides PS417_00845 and PS417_00850 are separated by 69 nucleotides PS417_00850 and PS417_00855 overlap by 38 nucleotides
PS417_00840: PS417_00840 - hypothetical protein, at 186,254 to 190,063
_00840
PS417_00845: PS417_00845 - transcriptional regulator, at 190,140 to 190,505
_00845
PS417_00850: PS417_00850 - hypothetical protein, at 190,575 to 190,763
_00850
PS417_00855: PS417_00855 - chromosome segregation protein SMC, at 190,726 to 191,670
_00855
Position (kb) 190
191 Strain fitness (log2 ratio) -2
-1
0
1
2 at 189.201 kb on + strand, within PS417_00840 at 189.206 kb on - strand, within PS417_00840 at 189.238 kb on + strand, within PS417_00840 at 189.406 kb on - strand, within PS417_00840 at 189.516 kb on + strand, within PS417_00840 at 189.535 kb on + strand, within PS417_00840 at 189.536 kb on - strand, within PS417_00840 at 189.612 kb on + strand, within PS417_00840 at 189.762 kb on - strand at 189.762 kb on - strand at 189.854 kb on - strand at 189.921 kb on + strand at 189.922 kb on - strand at 190.010 kb on + strand at 190.011 kb on - strand at 190.142 kb on - strand at 190.366 kb on + strand, within PS417_00845 at 190.437 kb on + strand, within PS417_00845 at 190.531 kb on - strand at 190.577 kb on - strand at 190.856 kb on + strand, within PS417_00855 at 190.942 kb on + strand, within PS417_00855 at 190.990 kb on + strand, within PS417_00855 at 191.076 kb on + strand, within PS417_00855 at 191.102 kb on + strand, within PS417_00855 at 191.102 kb on + strand, within PS417_00855 at 191.102 kb on + strand, within PS417_00855 at 191.102 kb on + strand, within PS417_00855 at 191.106 kb on + strand, within PS417_00855 at 191.110 kb on + strand, within PS417_00855 at 191.110 kb on + strand, within PS417_00855 at 191.163 kb on + strand, within PS417_00855 at 191.164 kb on - strand, within PS417_00855 at 191.470 kb on + strand, within PS417_00855 at 191.470 kb on + strand, within PS417_00855 at 191.470 kb on + strand, within PS417_00855 at 191.470 kb on + strand, within PS417_00855 at 191.474 kb on - strand, within PS417_00855
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.16 mg/ml remove 189,201 + PS417_00840 0.77 -0.1 189,206 - PS417_00840 0.77 -1.8 189,238 + PS417_00840 0.78 -1.2 189,406 - PS417_00840 0.83 -0.4 189,516 + PS417_00840 0.86 -0.2 189,535 + PS417_00840 0.86 +0.2 189,536 - PS417_00840 0.86 -0.2 189,612 + PS417_00840 0.88 +0.5 189,762 - +0.2 189,762 - -0.2 189,854 - +0.2 189,921 + +0.3 189,922 - +0.1 190,010 + +0.1 190,011 - +0.0 190,142 - -0.1 190,366 + PS417_00845 0.62 -1.2 190,437 + PS417_00845 0.81 +0.4 190,531 - -0.3 190,577 - +2.7 190,856 + PS417_00855 0.14 +0.9 190,942 + PS417_00855 0.23 -0.3 190,990 + PS417_00855 0.28 +0.9 191,076 + PS417_00855 0.37 +0.1 191,102 + PS417_00855 0.40 -0.9 191,102 + PS417_00855 0.40 +0.2 191,102 + PS417_00855 0.40 +0.2 191,102 + PS417_00855 0.40 -0.2 191,106 + PS417_00855 0.40 -0.1 191,110 + PS417_00855 0.41 +0.0 191,110 + PS417_00855 0.41 -0.2 191,163 + PS417_00855 0.46 +0.3 191,164 - PS417_00855 0.46 +0.2 191,470 + PS417_00855 0.79 -0.9 191,470 + PS417_00855 0.79 -0.1 191,470 + PS417_00855 0.79 -0.6 191,470 + PS417_00855 0.79 -0.6 191,474 - PS417_00855 0.79 -0.4
Or see this region's nucleotide sequence