Strain Fitness in Pseudomonas simiae WCS417 around PS417_06600
Experiment: A22 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | A22 0.16 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,459,639 | - | -0.3 | |||
1,460,367 | - | PS417_06595 | 0.75 | +0.7 | |
1,460,513 | + | +0.8 | |||
1,460,547 | + | +0.1 | |||
1,460,563 | - | +0.0 | |||
1,461,151 | - | PS417_06600 | 0.79 | -2.3 | |
1,461,755 | - | PS417_06605 | 0.35 | -0.5 | |
1,461,800 | + | PS417_06605 | 0.39 | -0.3 | |
1,461,816 | - | PS417_06605 | 0.40 | -0.7 | |
1,461,983 | + | PS417_06605 | 0.54 | +0.1 | |
1,462,103 | + | PS417_06605 | 0.63 | -0.0 | |
1,462,103 | + | PS417_06605 | 0.63 | -1.4 | |
1,462,109 | + | PS417_06605 | 0.64 | +0.0 | |
1,462,109 | + | PS417_06605 | 0.64 | -0.7 | |
1,462,109 | + | PS417_06605 | 0.64 | -0.0 | |
1,462,110 | - | PS417_06605 | 0.64 | +0.5 | |
1,462,200 | - | PS417_06605 | 0.71 | -0.2 | |
1,462,200 | - | PS417_06605 | 0.71 | -0.3 |
Or see this region's nucleotide sequence