Experiment: m.b. Nickel (II) chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4671 and Echvi_4672 are separated by 3 nucleotides Echvi_4672 and Echvi_4673 are separated by 306 nucleotides
Echvi_4671: Echvi_4671 - RIP metalloprotease RseP, at 5,591,910 to 5,593,229
_4671
Echvi_4672: Echvi_4672 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase, at 5,593,233 to 5,594,399
_4672
Echvi_4673: Echvi_4673 - Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain, at 5,594,706 to 5,596,166
_4673
Position (kb)
5593
5594
5595 Strain fitness (log2 ratio)
-2
-1
0
1 at 5593.230 kb on - strand at 5593.232 kb on - strand at 5593.235 kb on - strand at 5594.570 kb on - strand at 5594.690 kb on + strand at 5594.690 kb on + strand at 5594.690 kb on + strand at 5594.690 kb on + strand at 5594.691 kb on - strand at 5594.692 kb on + strand at 5594.692 kb on + strand at 5594.692 kb on + strand at 5594.698 kb on + strand at 5594.698 kb on + strand at 5594.698 kb on + strand at 5594.698 kb on + strand at 5594.723 kb on + strand at 5594.723 kb on + strand at 5594.724 kb on - strand at 5594.724 kb on - strand at 5594.770 kb on - strand at 5594.770 kb on - strand at 5594.986 kb on - strand, within Echvi_4673 at 5594.992 kb on + strand, within Echvi_4673 at 5595.000 kb on + strand, within Echvi_4673 at 5595.076 kb on - strand, within Echvi_4673 at 5595.100 kb on + strand, within Echvi_4673 at 5595.100 kb on + strand, within Echvi_4673 at 5595.144 kb on + strand, within Echvi_4673 at 5595.146 kb on + strand, within Echvi_4673 at 5595.146 kb on + strand, within Echvi_4673 at 5595.177 kb on - strand, within Echvi_4673 at 5595.177 kb on - strand, within Echvi_4673 at 5595.288 kb on - strand, within Echvi_4673 at 5595.293 kb on + strand, within Echvi_4673 at 5595.293 kb on + strand, within Echvi_4673 at 5595.293 kb on + strand, within Echvi_4673 at 5595.294 kb on - strand, within Echvi_4673
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 0.5 mM remove 5,593,230 - +1.0 5,593,232 - +0.1 5,593,235 - -0.1 5,594,570 - +1.1 5,594,690 + +0.3 5,594,690 + +1.2 5,594,690 + -1.8 5,594,690 + +1.1 5,594,691 - +0.7 5,594,692 + -0.6 5,594,692 + +0.3 5,594,692 + -0.2 5,594,698 + -0.1 5,594,698 + -0.8 5,594,698 + -0.7 5,594,698 + -0.1 5,594,723 + +0.2 5,594,723 + +0.5 5,594,724 - -1.6 5,594,724 - -0.7 5,594,770 - +0.5 5,594,770 - +0.2 5,594,986 - Echvi_4673 0.19 +0.8 5,594,992 + Echvi_4673 0.20 -0.3 5,595,000 + Echvi_4673 0.20 -0.2 5,595,076 - Echvi_4673 0.25 +0.2 5,595,100 + Echvi_4673 0.27 +0.1 5,595,100 + Echvi_4673 0.27 +1.0 5,595,144 + Echvi_4673 0.30 -0.9 5,595,146 + Echvi_4673 0.30 -0.8 5,595,146 + Echvi_4673 0.30 +0.5 5,595,177 - Echvi_4673 0.32 -1.9 5,595,177 - Echvi_4673 0.32 +1.2 5,595,288 - Echvi_4673 0.40 +0.4 5,595,293 + Echvi_4673 0.40 +0.6 5,595,293 + Echvi_4673 0.40 -0.5 5,595,293 + Echvi_4673 0.40 -0.5 5,595,294 - Echvi_4673 0.40 +0.1
Or see this region's nucleotide sequence