Experiment: m.b. Nickel (II) chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4670 and Echvi_4671 are separated by 228 nucleotides Echvi_4671 and Echvi_4672 are separated by 3 nucleotides
Echvi_4670: Echvi_4670 - ATP-dependent protease La, at 5,589,198 to 5,591,681
_4670
Echvi_4671: Echvi_4671 - RIP metalloprotease RseP, at 5,591,910 to 5,593,229
_4671
Echvi_4672: Echvi_4672 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase, at 5,593,233 to 5,594,399
_4672
Position (kb)
5591
5592
5593
5594 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5590.979 kb on + strand, within Echvi_4670 at 5590.979 kb on + strand, within Echvi_4670 at 5590.979 kb on + strand, within Echvi_4670 at 5590.980 kb on - strand, within Echvi_4670 at 5590.980 kb on - strand, within Echvi_4670 at 5590.981 kb on + strand, within Echvi_4670 at 5590.981 kb on + strand, within Echvi_4670 at 5590.982 kb on - strand, within Echvi_4670 at 5591.047 kb on - strand, within Echvi_4670 at 5591.102 kb on + strand, within Echvi_4670 at 5591.103 kb on - strand, within Echvi_4670 at 5591.146 kb on - strand, within Echvi_4670 at 5591.146 kb on - strand, within Echvi_4670 at 5591.233 kb on + strand, within Echvi_4670 at 5591.234 kb on - strand, within Echvi_4670 at 5591.234 kb on - strand, within Echvi_4670 at 5591.309 kb on + strand, within Echvi_4670 at 5591.315 kb on + strand, within Echvi_4670 at 5591.316 kb on - strand, within Echvi_4670 at 5591.318 kb on + strand, within Echvi_4670 at 5591.319 kb on - strand, within Echvi_4670 at 5591.319 kb on - strand, within Echvi_4670 at 5591.319 kb on - strand, within Echvi_4670 at 5591.374 kb on + strand, within Echvi_4670 at 5591.374 kb on + strand, within Echvi_4670 at 5591.374 kb on + strand, within Echvi_4670 at 5591.374 kb on + strand, within Echvi_4670 at 5591.374 kb on + strand, within Echvi_4670 at 5591.374 kb on + strand, within Echvi_4670 at 5591.374 kb on + strand, within Echvi_4670 at 5591.375 kb on - strand, within Echvi_4670 at 5591.378 kb on + strand, within Echvi_4670 at 5591.379 kb on - strand, within Echvi_4670 at 5591.379 kb on - strand, within Echvi_4670 at 5591.549 kb on + strand at 5591.550 kb on - strand at 5591.611 kb on - strand at 5591.656 kb on + strand at 5591.657 kb on - strand at 5591.657 kb on - strand at 5591.659 kb on - strand at 5591.659 kb on - strand at 5591.659 kb on - strand at 5591.659 kb on - strand at 5591.683 kb on + strand at 5591.684 kb on - strand at 5591.684 kb on - strand at 5591.684 kb on - strand at 5591.685 kb on + strand at 5591.686 kb on - strand at 5591.686 kb on - strand at 5591.709 kb on + strand at 5591.725 kb on - strand at 5591.727 kb on - strand at 5591.755 kb on + strand at 5591.755 kb on + strand at 5591.755 kb on + strand at 5591.755 kb on + strand at 5591.755 kb on + strand at 5591.755 kb on + strand at 5591.755 kb on + strand at 5591.755 kb on + strand at 5591.828 kb on + strand at 5591.890 kb on - strand at 5593.230 kb on - strand at 5593.232 kb on - strand at 5593.235 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 0.5 mM remove 5,590,979 + Echvi_4670 0.72 -0.8 5,590,979 + Echvi_4670 0.72 -1.3 5,590,979 + Echvi_4670 0.72 +0.6 5,590,980 - Echvi_4670 0.72 -1.1 5,590,980 - Echvi_4670 0.72 +2.0 5,590,981 + Echvi_4670 0.72 -0.2 5,590,981 + Echvi_4670 0.72 +0.8 5,590,982 - Echvi_4670 0.72 +0.0 5,591,047 - Echvi_4670 0.74 +0.6 5,591,102 + Echvi_4670 0.77 +0.9 5,591,103 - Echvi_4670 0.77 +0.5 5,591,146 - Echvi_4670 0.78 +0.8 5,591,146 - Echvi_4670 0.78 +1.1 5,591,233 + Echvi_4670 0.82 +1.2 5,591,234 - Echvi_4670 0.82 -0.4 5,591,234 - Echvi_4670 0.82 -0.4 5,591,309 + Echvi_4670 0.85 -1.7 5,591,315 + Echvi_4670 0.85 -0.4 5,591,316 - Echvi_4670 0.85 +0.3 5,591,318 + Echvi_4670 0.85 -0.3 5,591,319 - Echvi_4670 0.85 +0.5 5,591,319 - Echvi_4670 0.85 -1.3 5,591,319 - Echvi_4670 0.85 -0.3 5,591,374 + Echvi_4670 0.88 +1.0 5,591,374 + Echvi_4670 0.88 +0.7 5,591,374 + Echvi_4670 0.88 +0.4 5,591,374 + Echvi_4670 0.88 -0.8 5,591,374 + Echvi_4670 0.88 -0.4 5,591,374 + Echvi_4670 0.88 -0.2 5,591,374 + Echvi_4670 0.88 -2.8 5,591,375 - Echvi_4670 0.88 -0.1 5,591,378 + Echvi_4670 0.88 +1.8 5,591,379 - Echvi_4670 0.88 +0.3 5,591,379 - Echvi_4670 0.88 +0.4 5,591,549 + -0.3 5,591,550 - +0.3 5,591,611 - +1.5 5,591,656 + -0.2 5,591,657 - -0.9 5,591,657 - -2.9 5,591,659 - -0.5 5,591,659 - +0.1 5,591,659 - +0.2 5,591,659 - -0.3 5,591,683 + +1.7 5,591,684 - -0.3 5,591,684 - -0.6 5,591,684 - -1.1 5,591,685 + -0.5 5,591,686 - +0.0 5,591,686 - -0.7 5,591,709 + -0.7 5,591,725 - +0.9 5,591,727 - -1.3 5,591,755 + -0.3 5,591,755 + +0.8 5,591,755 + -0.1 5,591,755 + +0.5 5,591,755 + +0.0 5,591,755 + +0.3 5,591,755 + +0.3 5,591,755 + +1.6 5,591,828 + -0.4 5,591,890 - -0.4 5,593,230 - +1.0 5,593,232 - +0.1 5,593,235 - -0.1
Or see this region's nucleotide sequence