Experiment: m.b. Nickel (II) chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4633 and Echvi_4634 are separated by 80 nucleotides Echvi_4634 and Echvi_4635 are separated by 2 nucleotides Echvi_4635 and Echvi_4636 are separated by 515 nucleotides
Echvi_4633: Echvi_4633 - trigger factor, at 5,542,953 to 5,544,281
_4633
Echvi_4634: Echvi_4634 - Protease subunit of ATP-dependent Clp proteases, at 5,544,362 to 5,545,033
_4634
Echvi_4635: Echvi_4635 - endopeptidase Clp ATP-binding regulatory subunit (clpX), at 5,545,036 to 5,546,259
_4635
Echvi_4636: Echvi_4636 - lipid-A-disaccharide synthase, at 5,546,775 to 5,547,890
_4636
Position (kb)
5545
5546
5547 Strain fitness (log2 ratio)
-2
-1
0
1 at 5544.092 kb on - strand, within Echvi_4633 at 5544.135 kb on + strand, within Echvi_4633 at 5544.140 kb on - strand, within Echvi_4633 at 5544.147 kb on - strand, within Echvi_4633 at 5544.261 kb on - strand at 5544.279 kb on + strand at 5546.357 kb on + strand at 5546.376 kb on + strand at 5546.377 kb on - strand at 5546.377 kb on - strand at 5546.377 kb on - strand at 5546.424 kb on + strand at 5546.424 kb on + strand at 5546.425 kb on - strand at 5546.425 kb on - strand at 5546.427 kb on - strand at 5546.432 kb on + strand at 5546.432 kb on + strand at 5546.432 kb on + strand at 5546.449 kb on + strand at 5546.449 kb on + strand at 5546.449 kb on + strand at 5546.451 kb on + strand at 5546.451 kb on + strand at 5546.451 kb on + strand at 5546.451 kb on + strand at 5546.451 kb on + strand at 5546.452 kb on - strand at 5546.452 kb on - strand at 5546.452 kb on - strand at 5546.452 kb on - strand at 5546.489 kb on + strand at 5546.494 kb on - strand at 5546.530 kb on + strand at 5546.561 kb on + strand at 5546.561 kb on + strand at 5546.562 kb on - strand at 5546.581 kb on + strand at 5546.617 kb on + strand at 5546.650 kb on + strand at 5546.651 kb on - strand at 5546.651 kb on - strand at 5546.711 kb on + strand at 5546.712 kb on - strand at 5546.712 kb on - strand at 5546.712 kb on - strand at 5546.713 kb on + strand at 5546.713 kb on + strand at 5546.714 kb on - strand at 5546.776 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 0.5 mM remove 5,544,092 - Echvi_4633 0.86 -0.4 5,544,135 + Echvi_4633 0.89 -0.5 5,544,140 - Echvi_4633 0.89 -0.4 5,544,147 - Echvi_4633 0.90 -1.4 5,544,261 - +0.2 5,544,279 + -0.5 5,546,357 + -0.6 5,546,376 + +0.0 5,546,377 - +0.3 5,546,377 - +1.2 5,546,377 - -1.0 5,546,424 + -0.0 5,546,424 + +0.3 5,546,425 - -0.9 5,546,425 - -0.2 5,546,427 - -0.4 5,546,432 + -1.1 5,546,432 + -2.1 5,546,432 + +0.2 5,546,449 + -0.2 5,546,449 + -0.0 5,546,449 + +0.1 5,546,451 + -0.7 5,546,451 + +0.2 5,546,451 + +0.1 5,546,451 + -0.6 5,546,451 + -1.8 5,546,452 - +0.6 5,546,452 - +0.7 5,546,452 - -1.6 5,546,452 - +0.5 5,546,489 + -0.4 5,546,494 - +0.7 5,546,530 + +0.8 5,546,561 + +0.0 5,546,561 + -0.7 5,546,562 - -0.5 5,546,581 + +0.4 5,546,617 + +0.7 5,546,650 + +0.0 5,546,651 - -1.8 5,546,651 - +0.6 5,546,711 + -1.7 5,546,712 - -0.5 5,546,712 - -0.2 5,546,712 - -1.1 5,546,713 + -0.3 5,546,713 + -0.2 5,546,714 - -0.7 5,546,776 + -0.3
Or see this region's nucleotide sequence