Experiment: m.b. Nickel (II) chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3718 and Echvi_3719 are separated by 4 nucleotides Echvi_3719 and Echvi_3720 are separated by 249 nucleotides Echvi_3720 and Echvi_3721 are separated by 134 nucleotides Echvi_3721 and Echvi_3722 are separated by 140 nucleotides
Echvi_3718: Echvi_3718 - Coproporphyrinogen III oxidase, at 4,424,598 to 4,425,506
_3718
Echvi_3719: Echvi_3719 - Membrane-associated phospholipid phosphatase, at 4,425,511 to 4,426,098
_3719
Echvi_3720: Echvi_3720 - riboflavin synthase, alpha subunit, at 4,426,348 to 4,426,935
_3720
Echvi_3721: Echvi_3721 - protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 4,427,070 to 4,427,723
_3721
Echvi_3722: Echvi_3722 - Acyl-CoA hydrolase, at 4,427,864 to 4,428,406
_3722
Position (kb)
4426
4427 Strain fitness (log2 ratio)
-1
0
1
2 at 4425.504 kb on + strand at 4425.516 kb on - strand at 4426.130 kb on + strand at 4426.160 kb on - strand at 4426.164 kb on - strand at 4426.164 kb on - strand at 4426.164 kb on - strand at 4426.164 kb on - strand at 4426.164 kb on - strand at 4426.176 kb on + strand at 4426.176 kb on + strand at 4426.177 kb on - strand at 4426.187 kb on + strand at 4426.188 kb on - strand at 4426.207 kb on - strand at 4426.220 kb on + strand at 4426.220 kb on + strand at 4426.221 kb on - strand at 4426.224 kb on + strand at 4426.224 kb on + strand at 4426.225 kb on - strand at 4426.234 kb on + strand at 4426.242 kb on - strand at 4426.242 kb on - strand at 4426.274 kb on + strand at 4426.275 kb on - strand at 4426.275 kb on - strand at 4426.292 kb on + strand at 4426.293 kb on - strand at 4427.004 kb on - strand at 4427.063 kb on + strand at 4427.063 kb on + strand at 4427.064 kb on - strand at 4427.087 kb on + strand at 4427.091 kb on + strand at 4427.091 kb on + strand at 4427.091 kb on + strand at 4427.091 kb on + strand at 4427.092 kb on - strand at 4427.092 kb on - strand at 4427.092 kb on - strand at 4427.122 kb on + strand at 4427.226 kb on + strand, within Echvi_3721 at 4427.227 kb on - strand, within Echvi_3721 at 4427.227 kb on - strand, within Echvi_3721 at 4427.279 kb on + strand, within Echvi_3721 at 4427.374 kb on - strand, within Echvi_3721 at 4427.377 kb on + strand, within Echvi_3721 at 4427.377 kb on + strand, within Echvi_3721 at 4427.392 kb on + strand, within Echvi_3721 at 4427.393 kb on - strand, within Echvi_3721 at 4427.393 kb on - strand, within Echvi_3721 at 4427.472 kb on + strand, within Echvi_3721 at 4427.616 kb on - strand, within Echvi_3721 at 4427.677 kb on - strand at 4427.681 kb on + strand at 4427.681 kb on + strand at 4427.744 kb on - strand at 4427.744 kb on - strand at 4427.744 kb on - strand at 4427.898 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 0.5 mM remove 4,425,504 + -0.2 4,425,516 - -0.9 4,426,130 + +0.4 4,426,160 - +2.3 4,426,164 - -0.0 4,426,164 - -0.6 4,426,164 - -0.3 4,426,164 - -0.5 4,426,164 - -1.0 4,426,176 + +0.0 4,426,176 + -0.6 4,426,177 - +0.5 4,426,187 + -0.0 4,426,188 - -0.2 4,426,207 - +0.0 4,426,220 + -0.7 4,426,220 + +0.8 4,426,221 - -0.2 4,426,224 + -0.0 4,426,224 + +0.8 4,426,225 - -0.0 4,426,234 + +0.3 4,426,242 - +0.7 4,426,242 - -0.2 4,426,274 + -1.7 4,426,275 - +1.4 4,426,275 - -1.2 4,426,292 + +0.5 4,426,293 - +0.7 4,427,004 - +0.4 4,427,063 + +0.2 4,427,063 + -0.3 4,427,064 - -0.3 4,427,087 + -0.5 4,427,091 + -0.6 4,427,091 + +1.4 4,427,091 + -0.7 4,427,091 + +0.2 4,427,092 - +0.4 4,427,092 - -0.5 4,427,092 - +1.3 4,427,122 + -0.2 4,427,226 + Echvi_3721 0.24 -0.9 4,427,227 - Echvi_3721 0.24 -0.8 4,427,227 - Echvi_3721 0.24 -0.4 4,427,279 + Echvi_3721 0.32 -0.9 4,427,374 - Echvi_3721 0.46 +0.3 4,427,377 + Echvi_3721 0.47 -0.4 4,427,377 + Echvi_3721 0.47 -0.5 4,427,392 + Echvi_3721 0.49 -0.4 4,427,393 - Echvi_3721 0.49 -0.9 4,427,393 - Echvi_3721 0.49 +0.1 4,427,472 + Echvi_3721 0.61 -0.9 4,427,616 - Echvi_3721 0.83 +0.3 4,427,677 - +0.4 4,427,681 + -0.6 4,427,681 + -1.0 4,427,744 - +1.3 4,427,744 - +0.3 4,427,744 - +0.4 4,427,898 + -1.1
Or see this region's nucleotide sequence