Experiment: m.b. Nickel (II) chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3546 and Echvi_3547 are separated by 1 nucleotides Echvi_3547 and Echvi_3548 overlap by 32 nucleotides Echvi_3548 and Echvi_3549 overlap by 4 nucleotides
Echvi_3546: Echvi_3546 - ABC-type Mn2+/Zn2+ transport systems, permease components, at 4,204,901 to 4,206,193
_3546
Echvi_3547: Echvi_3547 - ABC-type Mn/Zn transport systems, ATPase component, at 4,206,195 to 4,206,983
_3547
Echvi_3548: Echvi_3548 - ABC-type metal ion transport system, periplasmic component/surface adhesin, at 4,206,952 to 4,207,896
_3548
Echvi_3549: Echvi_3549 - Mn-dependent transcriptional regulator, at 4,207,893 to 4,208,561
_3549
Position (kb) 4206
4207 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4205.309 kb on - strand, within Echvi_3546 at 4205.317 kb on - strand, within Echvi_3546 at 4207.911 kb on + strand at 4207.914 kb on + strand at 4207.915 kb on - strand at 4207.915 kb on - strand at 4207.926 kb on + strand at 4207.927 kb on - strand at 4207.927 kb on - strand at 4207.941 kb on - strand at 4207.941 kb on - strand at 4207.956 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 0.5 mM remove 4,205,309 - Echvi_3546 0.32 -1.9 4,205,317 - Echvi_3546 0.32 -0.6 4,207,911 + -1.1 4,207,914 + -2.3 4,207,915 - +0.9 4,207,915 - +1.7 4,207,926 + -3.0 4,207,927 - +1.1 4,207,927 - +2.0 4,207,941 - -1.1 4,207,941 - +0.5 4,207,956 - +1.3
Or see this region's nucleotide sequence