Experiment: m.b. Nickel (II) chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3056 and Echvi_3057 are separated by 491 nucleotides Echvi_3057 and Echvi_3058 are separated by 313 nucleotides Echvi_3058 and Echvi_3059 are separated by 26 nucleotides
Echvi_3056: Echvi_3056 - Superfamily II DNA and RNA helicases, at 3,648,682 to 3,650,385
_3056
Echvi_3057: Echvi_3057 - citrate synthase I (hexameric type), at 3,650,877 to 3,652,163
_3057
Echvi_3058: Echvi_3058 - Protein of unknown function (DUF1094)., at 3,652,477 to 3,652,896
_3058
Echvi_3059: Echvi_3059 - FeS assembly SUF system protein, at 3,652,923 to 3,653,264
_3059
Position (kb)
3650
3651
3652
3653 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3650.424 kb on - strand at 3650.424 kb on - strand at 3650.424 kb on - strand at 3650.521 kb on - strand at 3650.552 kb on + strand at 3650.649 kb on + strand at 3650.651 kb on + strand at 3650.651 kb on + strand at 3650.651 kb on + strand at 3650.655 kb on + strand at 3650.655 kb on + strand at 3650.655 kb on + strand at 3650.681 kb on - strand at 3650.722 kb on + strand at 3650.725 kb on + strand at 3650.743 kb on + strand at 3650.779 kb on + strand at 3650.814 kb on - strand at 3650.831 kb on - strand at 3650.843 kb on - strand at 3650.843 kb on - strand at 3650.846 kb on + strand at 3650.853 kb on + strand at 3650.854 kb on - strand at 3650.867 kb on - strand at 3650.874 kb on - strand at 3652.011 kb on - strand, within Echvi_3057 at 3652.181 kb on - strand at 3652.181 kb on - strand at 3652.185 kb on - strand at 3652.224 kb on - strand at 3652.256 kb on - strand at 3652.263 kb on - strand at 3652.267 kb on - strand at 3652.267 kb on - strand at 3652.416 kb on - strand at 3652.465 kb on + strand at 3652.479 kb on - strand at 3652.479 kb on - strand at 3652.768 kb on - strand, within Echvi_3058 at 3652.876 kb on + strand at 3652.897 kb on - strand at 3652.915 kb on + strand at 3652.916 kb on - strand at 3652.916 kb on - strand at 3652.924 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 0.5 mM remove 3,650,424 - -0.6 3,650,424 - -0.7 3,650,424 - +0.4 3,650,521 - -0.1 3,650,552 + +0.3 3,650,649 + +1.8 3,650,651 + +0.0 3,650,651 + +0.8 3,650,651 + -0.3 3,650,655 + -0.5 3,650,655 + -2.4 3,650,655 + +0.4 3,650,681 - +0.1 3,650,722 + -0.1 3,650,725 + +0.3 3,650,743 + +0.8 3,650,779 + -0.4 3,650,814 - -1.0 3,650,831 - +0.8 3,650,843 - +0.2 3,650,843 - +1.8 3,650,846 + -0.3 3,650,853 + +3.1 3,650,854 - -0.2 3,650,867 - -1.7 3,650,874 - -0.7 3,652,011 - Echvi_3057 0.88 -1.4 3,652,181 - +0.2 3,652,181 - -0.0 3,652,185 - +0.8 3,652,224 - -0.2 3,652,256 - -2.1 3,652,263 - +1.0 3,652,267 - -0.4 3,652,267 - -1.5 3,652,416 - +1.2 3,652,465 + -0.5 3,652,479 - +0.6 3,652,479 - -0.5 3,652,768 - Echvi_3058 0.69 +0.6 3,652,876 + +0.0 3,652,897 - -1.1 3,652,915 + +0.3 3,652,916 - -0.4 3,652,916 - -1.2 3,652,924 + +1.4
Or see this region's nucleotide sequence